RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 KIF14Q15058 1648 aa33.67■■■□□ 2.98
PPFIA3-212ENST00000602897 AEBP2Q6ZN18 517 aaPredicted RBP33.65■■■□□ 2.98
PPFIA3-212ENST00000602897 PLCH2O75038 1416 aa33.64■■■□□ 2.98
PPFIA3-212ENST00000602897 RAPGEF3O95398 923 aa33.63■■■□□ 2.97
PPFIA3-212ENST00000602897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.63■■■□□ 2.97
PPFIA3-212ENST00000602897 AKNAQ7Z591 1439 aa33.62■■■□□ 2.97
PPFIA3-212ENST00000602897 NCOA2Q15596 1464 aa33.61■■■□□ 2.97
PPFIA3-212ENST00000602897 CFAP74Q9C0B2 1584 aa33.59■■■□□ 2.97
PPFIA3-212ENST00000602897 ZEB1P37275 1124 aaPredicted RBP33.57■■■□□ 2.97
PPFIA3-212ENST00000602897 EFCAB2Q5VUJ9 269 aa33.54■■■□□ 2.96
PPFIA3-212ENST00000602897 DENND4BO75064 1496 aaPredicted RBP33.54■■■□□ 2.96
PPFIA3-212ENST00000602897 MYO5CQ9NQX4 1742 aa33.54■■■□□ 2.96
PPFIA3-212ENST00000602897 MYOM3Q5VTT5 1437 aa33.52■■■□□ 2.96
PPFIA3-212ENST00000602897 FGD6Q6ZV73 1430 aa33.51■■■□□ 2.96
PPFIA3-212ENST00000602897 KDM4FA0A1W2PPD8 638 aa33.5■■■□□ 2.95
PPFIA3-212ENST00000602897 FRMPD1Q5SYB0 1578 aa33.49■■■□□ 2.95
PPFIA3-212ENST00000602897 ADGRL1O94910 1474 aa33.48■■■□□ 2.95
PPFIA3-212ENST00000602897 ARHGAP5Q13017 1502 aa33.48■■■□□ 2.95
PPFIA3-212ENST00000602897 SCAPERQ9BY12 1400 aa33.46■■■□□ 2.95
PPFIA3-212ENST00000602897 RICTORQ6R327 1708 aa33.42■■■□□ 2.94
PPFIA3-212ENST00000602897 MIA2Q96PC5 1412 aa33.4■■■□□ 2.94
PPFIA3-212ENST00000602897 FAM50AQ14320 339 aaKnown RBP33.4■■■□□ 2.94
PPFIA3-212ENST00000602897 POGZQ7Z3K3 1410 aa33.37■■■□□ 2.93
PPFIA3-212ENST00000602897 PREX2Q70Z35 1606 aa33.37■■■□□ 2.93
PPFIA3-212ENST00000602897 CCER1Q8TC90 406 aaPredicted RBP33.37■■■□□ 2.93
PPFIA3-212ENST00000602897 CDC42BPBQ9Y5S2 1711 aa33.37■■■□□ 2.93
PPFIA3-212ENST00000602897 TCOF1Q13428 1488 aaKnown RBP33.33■■■□□ 2.93
PPFIA3-212ENST00000602897 ZMYM4Q5VZL5 1548 aa33.32■■■□□ 2.93
PPFIA3-212ENST00000602897 CDC42BPAQ5VT25 1732 aa33.32■■■□□ 2.92
PPFIA3-212ENST00000602897 PTPN23Q9H3S7 1636 aa33.31■■■□□ 2.92
PPFIA3-212ENST00000602897 GPATCH8Q9UKJ3 1502 aaKnown RBP33.31■■■□□ 2.92
PPFIA3-212ENST00000602897 ARHGEF40Q8TER5 1519 aa33.28■■■□□ 2.92
PPFIA3-212ENST00000602897 ZNF777Q9ULD5 760 aaPredicted RBP33.28■■■□□ 2.92
PPFIA3-212ENST00000602897 MAGI2Q86UL8 1455 aa33.27■■■□□ 2.92
PPFIA3-212ENST00000602897 ZNF518AQ6AHZ1 1483 aa33.27■■■□□ 2.92
PPFIA3-212ENST00000602897 AFAP1Q8N556 730 aa33.26■■■□□ 2.91
PPFIA3-212ENST00000602897 YEATS2Q9ULM3 1422 aa33.25■■■□□ 2.91
PPFIA3-212ENST00000602897 ZFYVE16Q7Z3T8 1539 aa33.25■■■□□ 2.91
PPFIA3-212ENST00000602897 ITGAEP38570 1179 aa33.25■■■□□ 2.91
PPFIA3-212ENST00000602897 CFDP1Q9UEE9 299 aaPredicted RBP33.25■■■□□ 2.91
PPFIA3-212ENST00000602897 ARID4BQ4LE39 1312 aaPredicted RBP33.24■■■□□ 2.91
PPFIA3-212ENST00000602897 ABCC1P33527 1531 aa33.23■■■□□ 2.91
PPFIA3-212ENST00000602897 ITSN2Q9NZM3 1697 aa33.21■■■□□ 2.91
PPFIA3-212ENST00000602897 ARHGEF12Q9NZN5 1544 aa33.21■■■□□ 2.91
PPFIA3-212ENST00000602897 TRAPPC8Q9Y2L5 1435 aa33.18■■■□□ 2.9
PPFIA3-212ENST00000602897 MYT1LQ9UL68 1186 aa33.17■■■□□ 2.9
PPFIA3-212ENST00000602897 SETD5Q9C0A6 1442 aa33.17■■■□□ 2.9
PPFIA3-212ENST00000602897 KDM5CP41229 1560 aa33.17■■■□□ 2.9
PPFIA3-212ENST00000602897 SAMD9LQ8IVG5 1584 aa33.16■■■□□ 2.9
PPFIA3-212ENST00000602897 HNRNPMP52272 730 aaKnown RBP eCLIP33.12■■■□□ 2.89
PPFIA3-212ENST00000602897 SYCP2Q9BX26 1530 aa33.11■■■□□ 2.89
PPFIA3-212ENST00000602897 ATP10AO60312 1499 aa33.1■■■□□ 2.89
PPFIA3-212ENST00000602897 PLEKHH2Q8IVE3 1493 aa33.1■■■□□ 2.89
PPFIA3-212ENST00000602897 HECW2Q9P2P5 1572 aa33.09■■■□□ 2.89
PPFIA3-212ENST00000602897 CLSPNQ9HAW4 1339 aa33.09■■■□□ 2.89
PPFIA3-212ENST00000602897 KIAA1107Q9UPP5 1409 aa33.09■■■□□ 2.89
PPFIA3-212ENST00000602897 MLH3Q9UHC1 1453 aa33.08■■■□□ 2.89
PPFIA3-212ENST00000602897 ZNF644Q9H582 1327 aaPredicted RBP33.07■■■□□ 2.88
PPFIA3-212ENST00000602897 RAB3GAP2Q9H2M9 1393 aa33.07■■■□□ 2.88
PPFIA3-212ENST00000602897 C9orf84Q5VXU9 1444 aa33.06■■■□□ 2.88
PPFIA3-212ENST00000602897 BCORL1Q5H9F3 1711 aa33.06■■■□□ 2.88
PPFIA3-212ENST00000602897 PTPRKQ15262 1439 aa33.05■■■□□ 2.88
PPFIA3-212ENST00000602897 ADAMTSL3P82987 1691 aa33.04■■■□□ 2.88
PPFIA3-212ENST00000602897 HFM1A2PYH4 1435 aa33.03■■■□□ 2.88
PPFIA3-212ENST00000602897 SIGLEC1Q9BZZ2 1709 aa33.02■■■□□ 2.88
PPFIA3-212ENST00000602897 DHX57Q6P158 1386 aaKnown RBP33■■■□□ 2.87
PPFIA3-212ENST00000602897 SPAG9O60271 1321 aaKnown RBP33■■■□□ 2.87
PPFIA3-212ENST00000602897 DIP2CQ9Y2E4 1556 aa33■■■□□ 2.87
PPFIA3-212ENST00000602897 MLECQ14165 292 aa32.99■■■□□ 2.87
PPFIA3-212ENST00000602897 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
PPFIA3-212ENST00000602897 CAMSAP2Q08AD1 1489 aa32.98■■■□□ 2.87
PPFIA3-212ENST00000602897 ABCA6Q8N139 1617 aa32.97■■■□□ 2.87
PPFIA3-212ENST00000602897 MADDQ8WXG6 1647 aa32.95■■■□□ 2.87
PPFIA3-212ENST00000602897 DAPK1P53355 1430 aa32.95■■■□□ 2.87
PPFIA3-212ENST00000602897 KIDINS220Q9ULH0 1771 aa32.95■■■□□ 2.86
PPFIA3-212ENST00000602897 PTPRMP28827 1452 aa32.93■■■□□ 2.86
PPFIA3-212ENST00000602897 MBD5Q9P267 1494 aa32.93■■■□□ 2.86
PPFIA3-212ENST00000602897 ROCK1Q13464 1354 aa32.93■■■□□ 2.86
PPFIA3-212ENST00000602897 ABCC5O15440 1437 aa32.92■■■□□ 2.86
PPFIA3-212ENST00000602897 NAIPQ13075 1403 aa32.91■■■□□ 2.86
PPFIA3-212ENST00000602897 ACIN1Q9UKV3 1341 aaKnown RBP32.91■■■□□ 2.86
PPFIA3-212ENST00000602897 REREQ9P2R6 1566 aa32.9■■■□□ 2.86
PPFIA3-212ENST00000602897 ATP7AQ04656 1500 aa32.88■■■□□ 2.85
PPFIA3-212ENST00000602897 GCC2Q8IWJ2 1684 aa32.85■■■□□ 2.85
PPFIA3-212ENST00000602897 INO80Q9ULG1 1556 aaPredicted RBP32.85■■■□□ 2.85
PPFIA3-212ENST00000602897 RIMS1Q86UR5 1692 aaKnown RBP32.84■■■□□ 2.85
PPFIA3-212ENST00000602897 RSPH4AQ5TD94 716 aa32.83■■■□□ 2.85
PPFIA3-212ENST00000602897 CCDC141Q6ZP82 1450 aa32.82■■■□□ 2.84
PPFIA3-212ENST00000602897 AGLP35573 1532 aa32.82■■■□□ 2.84
PPFIA3-212ENST00000602897 CHIC2Q9UKJ5 165 aa32.79■■■□□ 2.84
PPFIA3-212ENST00000602897 ARHGEF5Q12774 1597 aa32.79■■■□□ 2.84
PPFIA3-212ENST00000602897 RTEL1-TNFRSF6BF6WH68 1400 aa32.78■■■□□ 2.84
PPFIA3-212ENST00000602897 CROCC2H7BZ55 1655 aa32.78■■■□□ 2.84
PPFIA3-212ENST00000602897 PLPPR3Q6T4P5 718 aa32.77■■■□□ 2.84
PPFIA3-212ENST00000602897 SHANK2Q9UPX8 1470 aa32.77■■■□□ 2.84
PPFIA3-212ENST00000602897 FER1L4A9Z1Z3 1794 aa32.77■■■□□ 2.84
PPFIA3-212ENST00000602897 ADGRL2O95490 1459 aa32.77■■■□□ 2.84
PPFIA3-212ENST00000602897 A2MP01023 1474 aa32.75■■■□□ 2.83
PPFIA3-212ENST00000602897 RRP7BPQ9NSQ0 103 aa32.75■■■□□ 2.83
PPFIA3-212ENST00000602897 ADGBQ8N7X0 1667 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms