RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
UBE2E3-208ENST00000602632 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
UBE2E3-208ENST00000602632 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
UBE2E3-208ENST00000602632 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
UBE2E3-208ENST00000602632 EFCAB3Q8N7B9 438 aa12.72□□□□□ -0.37
UBE2E3-208ENST00000602632 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
UBE2E3-208ENST00000602632 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.385e-7■■■■□ 20
UBE2E3-208ENST00000602632 NACADO15069 1562 aa12.67□□□□□ -0.38
UBE2E3-208ENST00000602632 SOX12O15370 315 aa12.66□□□□□ -0.38
UBE2E3-208ENST00000602632 FKBP8Q14318 412 aa12.65□□□□□ -0.38
UBE2E3-208ENST00000602632 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
UBE2E3-208ENST00000602632 IFFO2Q5TF58 517 aa12.64□□□□□ -0.39
UBE2E3-208ENST00000602632 TK2O00142 265 aa12.63□□□□□ -0.39
UBE2E3-208ENST00000602632 POTEEQ6S8J3 1075 aa12.62□□□□□ -0.39
UBE2E3-208ENST00000602632 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
UBE2E3-208ENST00000602632 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
UBE2E3-208ENST00000602632 ARHGAP33O14559 1287 aa12.61□□□□□ -0.39
UBE2E3-208ENST00000602632 DCAF8L2P0C7V8 631 aa12.6□□□□□ -0.39
UBE2E3-208ENST00000602632 NUDT7P0C024 238 aa12.59□□□□□ -0.39
UBE2E3-208ENST00000602632 CIZ1Q9ULV3 898 aaPredicted RBP12.58□□□□□ -0.4
UBE2E3-208ENST00000602632 LHX6Q9UPM6 363 aa12.58□□□□□ -0.4
UBE2E3-208ENST00000602632 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
UBE2E3-208ENST00000602632 UNC13AQ9UPW8 1703 aa12.54□□□□□ -0.4
UBE2E3-208ENST00000602632 HRO43593 1189 aa12.54□□□□□ -0.4
UBE2E3-208ENST00000602632 MS4A4AQ96JQ5 239 aa12.53□□□□□ -0.4
UBE2E3-208ENST00000602632 SLC34A2O95436 690 aa12.52□□□□□ -0.41
UBE2E3-208ENST00000602632 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
UBE2E3-208ENST00000602632 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.41
UBE2E3-208ENST00000602632 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
UBE2E3-208ENST00000602632 A0A0G2JS52 829 aa12.48□□□□□ -0.41
UBE2E3-208ENST00000602632 PCDHGA4Q9Y5G9 962 aa12.48□□□□□ -0.41
UBE2E3-208ENST00000602632 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
UBE2E3-208ENST00000602632 KIF3CO14782 793 aa12.43□□□□□ -0.42
UBE2E3-208ENST00000602632 MYO15BQ96JP2 1530 aa12.42□□□□□ -0.42
UBE2E3-208ENST00000602632 NLRP6P59044 892 aa12.39□□□□□ -0.43
UBE2E3-208ENST00000602632 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
UBE2E3-208ENST00000602632 Q6ZNB5 142 aa12.38□□□□□ -0.43
UBE2E3-208ENST00000602632 C2orf72A6NCS6 295 aa12.37□□□□□ -0.43
UBE2E3-208ENST00000602632 DMRTA1Q5VZB9 504 aa12.37□□□□□ -0.43
UBE2E3-208ENST00000602632 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
UBE2E3-208ENST00000602632 PTPN5P54829 565 aa12.35□□□□□ -0.43
UBE2E3-208ENST00000602632 PSEN2P49810 448 aa12.32□□□□□ -0.44
UBE2E3-208ENST00000602632 PPP4R3BQ5MIZ7 849 aa12.32□□□□□ -0.44
UBE2E3-208ENST00000602632 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
UBE2E3-208ENST00000602632 VGFO15240 615 aaPredicted RBP12.29□□□□□ -0.44
UBE2E3-208ENST00000602632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
UBE2E3-208ENST00000602632 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
UBE2E3-208ENST00000602632 LAPTM4AQ15012 233 aa12.27□□□□□ -0.45
UBE2E3-208ENST00000602632 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
UBE2E3-208ENST00000602632 TMC2Q8TDI7 906 aa12.26□□□□□ -0.45
UBE2E3-208ENST00000602632 KDM4FA0A1W2PPD8 638 aa12.25□□□□□ -0.45
UBE2E3-208ENST00000602632 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
UBE2E3-208ENST00000602632 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
UBE2E3-208ENST00000602632 VPS9D1Q9Y2B5 631 aa12.23□□□□□ -0.45
UBE2E3-208ENST00000602632 SHROOM4Q9ULL8 1493 aa12.22□□□□□ -0.45
UBE2E3-208ENST00000602632 PTCD2Q8WV60 388 aaKnown RBP12.2□□□□□ -0.46
UBE2E3-208ENST00000602632 SLC4A5Q9BY07 1137 aa12.2□□□□□ -0.46
UBE2E3-208ENST00000602632 DCAF1Q9Y4B6 1507 aa12.2□□□□□ -0.46
UBE2E3-208ENST00000602632 ZCCHC6Q5VYS8 1495 aaKnown RBP12.2□□□□□ -0.46
UBE2E3-208ENST00000602632 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
UBE2E3-208ENST00000602632 CC2D2AQ9P2K1 1620 aa12.19□□□□□ -0.46
UBE2E3-208ENST00000602632 GOLGA8CPA6NN73 597 aa12.17□□□□□ -0.46
UBE2E3-208ENST00000602632 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
UBE2E3-208ENST00000602632 TAOK2Q9UL54 1235 aa12.16□□□□□ -0.46
UBE2E3-208ENST00000602632 SCRIBQ14160 1630 aa12.15□□□□□ -0.47
UBE2E3-208ENST00000602632 ITGBL1O95965 494 aaPredicted RBP12.14□□□□□ -0.47
UBE2E3-208ENST00000602632 WNT2BQ93097 391 aa12.14□□□□□ -0.47
UBE2E3-208ENST00000602632 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
UBE2E3-208ENST00000602632 TBC1D12O60347 775 aa12.11□□□□□ -0.47
UBE2E3-208ENST00000602632 RNF25Q96BH1 459 aaPredicted RBP12.11□□□□□ -0.47
UBE2E3-208ENST00000602632 BHMG1C9JSJ3 638 aaPredicted RBP12.1□□□□□ -0.47
UBE2E3-208ENST00000602632 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
UBE2E3-208ENST00000602632 MFRPQ9BY79 579 aa12.09□□□□□ -0.47
UBE2E3-208ENST00000602632 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.48
UBE2E3-208ENST00000602632 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
UBE2E3-208ENST00000602632 NBPF3Q9H094 633 aa12.05□□□□□ -0.48
UBE2E3-208ENST00000602632 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
UBE2E3-208ENST00000602632 NYAP1Q6ZVC0 841 aa12□□□□□ -0.49
UBE2E3-208ENST00000602632 STK24Q9Y6E0 443 aa11.99□□□□□ -0.49
UBE2E3-208ENST00000602632 LCE2BO14633 110 aa11.98□□□□□ -0.49
UBE2E3-208ENST00000602632 GFRA3O60609 400 aa11.97□□□□□ -0.49
UBE2E3-208ENST00000602632 PTPREP23469 700 aa11.97□□□□□ -0.49
UBE2E3-208ENST00000602632 FOXK1P85037 733 aa11.97□□□□□ -0.49
UBE2E3-208ENST00000602632 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
UBE2E3-208ENST00000602632 KCNC4Q03721 635 aa11.93□□□□□ -0.5
UBE2E3-208ENST00000602632 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
UBE2E3-208ENST00000602632 NRG2O14511 850 aaPredicted RBP11.92□□□□□ -0.5
UBE2E3-208ENST00000602632 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
UBE2E3-208ENST00000602632 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
UBE2E3-208ENST00000602632 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
UBE2E3-208ENST00000602632 STK25O00506 426 aa11.86□□□□□ -0.51
UBE2E3-208ENST00000602632 GPHNQ9NQX3 736 aaPredicted RBP11.86□□□□□ -0.51
UBE2E3-208ENST00000602632 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
UBE2E3-208ENST00000602632 FOSBP53539 338 aa11.81□□□□□ -0.52
UBE2E3-208ENST00000602632 LAPTM4BQ86VI4 370 aa11.8□□□□□ -0.52
UBE2E3-208ENST00000602632 ZNF775Q96BV0 537 aaPredicted RBP11.8□□□□□ -0.52
UBE2E3-208ENST00000602632 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
UBE2E3-208ENST00000602632 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
UBE2E3-208ENST00000602632 OXER1Q8TDS5 423 aa11.78□□□□□ -0.52
UBE2E3-208ENST00000602632 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms