RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 C7P10643 843 aa17■□□□□ 0.31
SGMS1-206ENST00000602565 KCNV2Q8TDN2 545 aa17■□□□□ 0.31
SGMS1-206ENST00000602565 L3MBTL3Q96JM7 780 aaPredicted RBP17■□□□□ 0.31
SGMS1-206ENST00000602565 E2F4Q16254 413 aa16.98■□□□□ 0.31
SGMS1-206ENST00000602565 METRNQ9UJH8 293 aa16.97■□□□□ 0.31
SGMS1-206ENST00000602565 MFSD10Q14728 455 aa16.96■□□□□ 0.31
SGMS1-206ENST00000602565 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.3
SGMS1-206ENST00000602565 TMC2Q8TDI7 906 aa16.95■□□□□ 0.3
SGMS1-206ENST00000602565 TMEM121BQ9BXQ6 578 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-206ENST00000602565 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
SGMS1-206ENST00000602565 PPP1R15BQ5SWA1 713 aa16.89■□□□□ 0.29
SGMS1-206ENST00000602565 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
SGMS1-206ENST00000602565 POTEFA5A3E0 1075 aa16.84■□□□□ 0.29
SGMS1-206ENST00000602565 DSG2Q14126 1118 aa16.8■□□□□ 0.28
SGMS1-206ENST00000602565 C3orf67Q6ZVT6 689 aa16.8■□□□□ 0.28
SGMS1-206ENST00000602565 C2orf72A6NCS6 295 aa16.79■□□□□ 0.28
SGMS1-206ENST00000602565 CAMK2BQ13554 666 aa16.79■□□□□ 0.28
SGMS1-206ENST00000602565 FOXK1P85037 733 aa16.78■□□□□ 0.28
SGMS1-206ENST00000602565 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
SGMS1-206ENST00000602565 KIF3CO14782 793 aa16.73■□□□□ 0.27
SGMS1-206ENST00000602565 PLPP6Q8IY26 295 aa16.73■□□□□ 0.27
SGMS1-206ENST00000602565 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-206ENST00000602565 TMEM92Q6UXU6 159 aa16.7■□□□□ 0.26
SGMS1-206ENST00000602565 ARIH1Q9Y4X5 557 aaPredicted RBP16.7■□□□□ 0.26
SGMS1-206ENST00000602565 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-206ENST00000602565 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.67■□□□□ 0.26
SGMS1-206ENST00000602565 SEMA3EO15041 775 aa16.65■□□□□ 0.26
SGMS1-206ENST00000602565 EMILIN3Q9NT22 766 aa16.65■□□□□ 0.26
SGMS1-206ENST00000602565 DPYSL4O14531 572 aa16.63■□□□□ 0.25
SGMS1-206ENST00000602565 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
SGMS1-206ENST00000602565 SMYD5Q6GMV2 418 aa16.58■□□□□ 0.24
SGMS1-206ENST00000602565 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
SGMS1-206ENST00000602565 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
SGMS1-206ENST00000602565 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
SGMS1-206ENST00000602565 SPDYE16A6NNV3 312 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-206ENST00000602565 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
SGMS1-206ENST00000602565 POTEB2H3BUK9 544 aa16.52■□□□□ 0.24
SGMS1-206ENST00000602565 PDIA6Q15084 440 aa16.52■□□□□ 0.24
SGMS1-206ENST00000602565 OXER1Q8TDS5 423 aa16.47■□□□□ 0.23
SGMS1-206ENST00000602565 TBC1D12O60347 775 aa16.46■□□□□ 0.23
SGMS1-206ENST00000602565 OTUD5Q96G74 571 aa16.46■□□□□ 0.23
SGMS1-206ENST00000602565 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
SGMS1-206ENST00000602565 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
SGMS1-206ENST00000602565 MLLT3P42568 568 aaPredicted RBP16.44■□□□□ 0.22
SGMS1-206ENST00000602565 MAMSTRQ6ZN01 415 aa16.44■□□□□ 0.22
SGMS1-206ENST00000602565 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
SGMS1-206ENST00000602565 SLC34A2O95436 690 aa16.4■□□□□ 0.22
SGMS1-206ENST00000602565 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
SGMS1-206ENST00000602565 PTCD2Q8WV60 388 aaKnown RBP16.4■□□□□ 0.22
SGMS1-206ENST00000602565 EVI5O60447 810 aa16.37■□□□□ 0.21
SGMS1-206ENST00000602565 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
SGMS1-206ENST00000602565 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
SGMS1-206ENST00000602565 DOK7Q18PE1 504 aa16.3■□□□□ 0.2
SGMS1-206ENST00000602565 ZC3H15Q8WU90 426 aaKnown RBP16.3■□□□□ 0.2
SGMS1-206ENST00000602565 DDX12PQ92771 950 aa16.3■□□□□ 0.2
SGMS1-206ENST00000602565 PCDHGA4Q9Y5G9 962 aa16.3■□□□□ 0.2
SGMS1-206ENST00000602565 GPIHBP1Q8IV16 184 aa16.29■□□□□ 0.2
SGMS1-206ENST00000602565 RIMBP2O15034 1052 aa16.27■□□□□ 0.2
SGMS1-206ENST00000602565 PTGER2P43116 358 aa16.27■□□□□ 0.2
SGMS1-206ENST00000602565 ZNF710Q8N1W2 664 aa16.22■□□□□ 0.19
SGMS1-206ENST00000602565 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
SGMS1-206ENST00000602565 HOXB3P14651 431 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-206ENST00000602565 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
SGMS1-206ENST00000602565 OSBPP22059 807 aa16.19■□□□□ 0.18
SGMS1-206ENST00000602565 SNPHO15079 494 aa16.18■□□□□ 0.18
SGMS1-206ENST00000602565 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
SGMS1-206ENST00000602565 ZMYND10O75800 440 aa16.16■□□□□ 0.18
SGMS1-206ENST00000602565 ARSIQ5FYB1 569 aa16.16■□□□□ 0.18
SGMS1-206ENST00000602565 PHF14O94880 888 aa16.15■□□□□ 0.18
SGMS1-206ENST00000602565 NUDT7P0C024 238 aa16.14■□□□□ 0.17
SGMS1-206ENST00000602565 EPAS1Q99814 870 aa16.14■□□□□ 0.17
SGMS1-206ENST00000602565 KHSRPQ92945 711 aaKnown RBP eCLIP16.11■□□□□ 0.17
SGMS1-206ENST00000602565 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
SGMS1-206ENST00000602565 KRI1Q8N9T8 703 aaKnown RBP16.1■□□□□ 0.17
SGMS1-206ENST00000602565 SLC24A3Q9HC58 644 aa16.1■□□□□ 0.17
SGMS1-206ENST00000602565 JPH4Q96JJ6 628 aa16.09■□□□□ 0.17
SGMS1-206ENST00000602565 MAP3K7O43318 606 aa16.08■□□□□ 0.16
SGMS1-206ENST00000602565 TYW1BQ6NUM6 668 aa16.08■□□□□ 0.16
SGMS1-206ENST00000602565 GPR153Q6NV75 609 aa16.08■□□□□ 0.16
SGMS1-206ENST00000602565 KDM4FA0A1W2PPD8 638 aa16.07■□□□□ 0.16
SGMS1-206ENST00000602565 EN1Q05925 392 aaPredicted RBP16.07■□□□□ 0.16
SGMS1-206ENST00000602565 PCDHGA10Q9Y5H3 936 aa16.07■□□□□ 0.16
SGMS1-206ENST00000602565 RBM33Q96EV2 1170 aaKnown RBP16.06■□□□□ 0.16
SGMS1-206ENST00000602565 POTEMA6NI47 508 aa16.05■□□□□ 0.16
SGMS1-206ENST00000602565 FCHSD2O94868 740 aa16.05■□□□□ 0.16
SGMS1-206ENST00000602565 PRIM1P49642 420 aaKnown RBP16.05■□□□□ 0.16
SGMS1-206ENST00000602565 ZNF454Q8N9F8 522 aa16.05■□□□□ 0.16
SGMS1-206ENST00000602565 FBXW7Q969H0 707 aa16.05■□□□□ 0.16
SGMS1-206ENST00000602565 GPR37O15354 613 aa16.02■□□□□ 0.16
SGMS1-206ENST00000602565 FOSBP53539 338 aa16.02■□□□□ 0.16
SGMS1-206ENST00000602565 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
SGMS1-206ENST00000602565 PLSCR2Q9NRY7 297 aa16.01■□□□□ 0.15
SGMS1-206ENST00000602565 HIC1Q14526 733 aa16■□□□□ 0.15
SGMS1-206ENST00000602565 GNPATO15228 680 aa15.99■□□□□ 0.15
SGMS1-206ENST00000602565 ZDHHC16Q969W1 377 aa15.99■□□□□ 0.15
SGMS1-206ENST00000602565 LHX6Q9UPM6 363 aa15.98■□□□□ 0.15
SGMS1-206ENST00000602565 HOXB1P14653 301 aaPredicted RBP15.96■□□□□ 0.15
SGMS1-206ENST00000602565 PTGDRQ13258 359 aa15.96■□□□□ 0.15
SGMS1-206ENST00000602565 AK7Q96M32 723 aa15.96■□□□□ 0.15
SGMS1-206ENST00000602565 CDHR5Q9HBB8 845 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms