RNA–Protein interactions for RNA: ENST00000602287.5

SFXN2-204, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-204ENST00000602287 CLIP1P30622 1438 aa24.98■■□□□ 1.59
SFXN2-204ENST00000602287 POGZQ7Z3K3 1410 aa24.98■■□□□ 1.59
SFXN2-204ENST00000602287 SCAPERQ9BY12 1400 aa24.97■■□□□ 1.59
SFXN2-204ENST00000602287 EFCAB2Q5VUJ9 269 aa24.95■■□□□ 1.58
SFXN2-204ENST00000602287 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
SFXN2-204ENST00000602287 CCDC18Q5T9S5 1454 aa24.94■■□□□ 1.58
SFXN2-204ENST00000602287 YEATS2Q9ULM3 1422 aa24.94■■□□□ 1.58
SFXN2-204ENST00000602287 PCF11O94913 1555 aaKnown RBP24.93■■□□□ 1.58
SFXN2-204ENST00000602287 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
SFXN2-204ENST00000602287 SIGLEC1Q9BZZ2 1709 aa24.91■■□□□ 1.58
SFXN2-204ENST00000602287 ARHGAP5Q13017 1502 aa24.9■■□□□ 1.58
SFXN2-204ENST00000602287 ZNF518AQ6AHZ1 1483 aa24.89■■□□□ 1.57
SFXN2-204ENST00000602287 CDC42BPBQ9Y5S2 1711 aa24.87■■□□□ 1.57
SFXN2-204ENST00000602287 FER1L4A9Z1Z3 1794 aa24.86■■□□□ 1.57
SFXN2-204ENST00000602287 ILDR1Q86SU0 546 aaPredicted RBP24.86■■□□□ 1.57
SFXN2-204ENST00000602287 PREX2Q70Z35 1606 aa24.86■■□□□ 1.57
SFXN2-204ENST00000602287 KDM5CP41229 1560 aa24.85■■□□□ 1.57
SFXN2-204ENST00000602287 ATP10AO60312 1499 aa24.85■■□□□ 1.57
SFXN2-204ENST00000602287 FYCO1Q9BQS8 1478 aa24.85■■□□□ 1.57
SFXN2-204ENST00000602287 C9orf84Q5VXU9 1444 aa24.84■■□□□ 1.57
SFXN2-204ENST00000602287 LMTK3Q96Q04 1460 aa24.83■■□□□ 1.56
SFXN2-204ENST00000602287 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
SFXN2-204ENST00000602287 CDC42BPAQ5VT25 1732 aa24.78■■□□□ 1.56
SFXN2-204ENST00000602287 ABCC1P33527 1531 aa24.76■■□□□ 1.55
SFXN2-204ENST00000602287 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
SFXN2-204ENST00000602287 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
SFXN2-204ENST00000602287 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
SFXN2-204ENST00000602287 DIP2CQ9Y2E4 1556 aa24.74■■□□□ 1.55
SFXN2-204ENST00000602287 MLECQ14165 292 aa24.73■■□□□ 1.55
SFXN2-204ENST00000602287 AFAP1Q8N556 730 aa24.73■■□□□ 1.55
SFXN2-204ENST00000602287 ABCA6Q8N139 1617 aa24.7■■□□□ 1.54
SFXN2-204ENST00000602287 PREX1Q8TCU6 1659 aa24.67■■□□□ 1.54
SFXN2-204ENST00000602287 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
SFXN2-204ENST00000602287 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
SFXN2-204ENST00000602287 AGLP35573 1532 aa24.65■■□□□ 1.54
SFXN2-204ENST00000602287 KIDINS220Q9ULH0 1771 aa24.65■■□□□ 1.54
SFXN2-204ENST00000602287 PLPPR3Q6T4P5 718 aa24.64■■□□□ 1.54
SFXN2-204ENST00000602287 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
SFXN2-204ENST00000602287 GPATCH8Q9UKJ3 1502 aaKnown RBP24.61■■□□□ 1.53
SFXN2-204ENST00000602287 SETD1BQ9UPS6 1966 aaKnown RBP24.6■■□□□ 1.53
SFXN2-204ENST00000602287 SYCP2Q9BX26 1530 aa24.58■■□□□ 1.53
SFXN2-204ENST00000602287 HSPA2P54652 639 aa24.58■■□□□ 1.53
SFXN2-204ENST00000602287 FBXO41Q8TF61 875 aa24.58■■□□□ 1.53
SFXN2-204ENST00000602287 PLEKHH2Q8IVE3 1493 aa24.58■■□□□ 1.52
SFXN2-204ENST00000602287 MTUS2Q5JR59 1369 aa24.55■■□□□ 1.52
SFXN2-204ENST00000602287 C3P01024 1663 aa24.55■■□□□ 1.52
SFXN2-204ENST00000602287 KIAA1107Q9UPP5 1409 aa24.54■■□□□ 1.52
SFXN2-204ENST00000602287 CCNB3Q8WWL7 1395 aa24.54■■□□□ 1.52
SFXN2-204ENST00000602287 EHBP1L1Q8N3D4 1523 aa24.53■■□□□ 1.52
SFXN2-204ENST00000602287 ZNF777Q9ULD5 760 aaPredicted RBP24.53■■□□□ 1.52
SFXN2-204ENST00000602287 CEBPAP49715 358 aaPredicted RBP24.51■■□□□ 1.51
SFXN2-204ENST00000602287 ESF1Q9H501 851 aaKnown RBP24.51■■□□□ 1.51
SFXN2-204ENST00000602287 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
SFXN2-204ENST00000602287 UHRF1BP1Q6BDS2 1440 aa24.51■■□□□ 1.51
SFXN2-204ENST00000602287 CNTLNQ9NXG0 1405 aa24.51■■□□□ 1.51
SFXN2-204ENST00000602287 ATP7AQ04656 1500 aa24.51■■□□□ 1.51
SFXN2-204ENST00000602287 INO80Q9ULG1 1556 aaPredicted RBP24.5■■□□□ 1.51
SFXN2-204ENST00000602287 SPAG9O60271 1321 aaKnown RBP24.5■■□□□ 1.51
SFXN2-204ENST00000602287 CEP162Q5TB80 1403 aa24.5■■□□□ 1.51
SFXN2-204ENST00000602287 MROH2AA6NES4 1674 aa24.49■■□□□ 1.51
SFXN2-204ENST00000602287 TIAM1Q13009 1591 aa24.48■■□□□ 1.51
SFXN2-204ENST00000602287 HNRNPMP52272 730 aaKnown RBP eCLIP24.46■■□□□ 1.51
SFXN2-204ENST00000602287 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
SFXN2-204ENST00000602287 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
SFXN2-204ENST00000602287 STRCQ7RTU9 1775 aa24.43■■□□□ 1.5
SFXN2-204ENST00000602287 ADGBQ8N7X0 1667 aa24.43■■□□□ 1.5
SFXN2-204ENST00000602287 A2MP01023 1474 aa24.4■■□□□ 1.5
SFXN2-204ENST00000602287 DMRT2Q9Y5R5 561 aa24.4■■□□□ 1.5
SFXN2-204ENST00000602287 NPATQ14207 1427 aa24.37■■□□□ 1.49
SFXN2-204ENST00000602287 MBD5Q9P267 1494 aa24.36■■□□□ 1.49
SFXN2-204ENST00000602287 CLTCQ00610 1675 aaKnown RBP24.35■■□□□ 1.49
SFXN2-204ENST00000602287 RTEL1-TNFRSF6BF6WH68 1400 aa24.35■■□□□ 1.49
SFXN2-204ENST00000602287 CERKQ8TCT0 537 aa24.33■■□□□ 1.49
SFXN2-204ENST00000602287 NCOA2Q15596 1464 aa24.32■■□□□ 1.48
SFXN2-204ENST00000602287 ZNF644Q9H582 1327 aaPredicted RBP24.32■■□□□ 1.48
SFXN2-204ENST00000602287 ZMYM3Q14202 1370 aa24.31■■□□□ 1.48
SFXN2-204ENST00000602287 PTPRTO14522 1441 aa24.3■■□□□ 1.48
SFXN2-204ENST00000602287 PPP6R1Q9UPN7 881 aa24.3■■□□□ 1.48
SFXN2-204ENST00000602287 CAMSAP2Q08AD1 1489 aa24.28■■□□□ 1.48
SFXN2-204ENST00000602287 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
SFXN2-204ENST00000602287 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
SFXN2-204ENST00000602287 VPS8Q8N3P4 1428 aa24.27■■□□□ 1.48
SFXN2-204ENST00000602287 RSPH4AQ5TD94 716 aa24.26■■□□□ 1.47
SFXN2-204ENST00000602287 NCOA1Q15788 1441 aa24.26■■□□□ 1.47
SFXN2-204ENST00000602287 MYO3AQ8NEV4 1616 aa24.25■■□□□ 1.47
SFXN2-204ENST00000602287 GGT6Q6P531 493 aa24.24■■□□□ 1.47
SFXN2-204ENST00000602287 ARHGEF5Q12774 1597 aa24.24■■□□□ 1.47
SFXN2-204ENST00000602287 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
SFXN2-204ENST00000602287 FAM135AQ9P2D6 1515 aa24.23■■□□□ 1.47
SFXN2-204ENST00000602287 CAMSAP1Q5T5Y3 1602 aa24.23■■□□□ 1.47
SFXN2-204ENST00000602287 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
SFXN2-204ENST00000602287 MAP3K1Q13233 1512 aa24.21■■□□□ 1.47
SFXN2-204ENST00000602287 PTPRKQ15262 1439 aa24.21■■□□□ 1.47
SFXN2-204ENST00000602287 CEP170BQ9Y4F5 1589 aaPredicted RBP24.2■■□□□ 1.46
SFXN2-204ENST00000602287 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
SFXN2-204ENST00000602287 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
SFXN2-204ENST00000602287 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.45
SFXN2-204ENST00000602287 LTBP4Q8N2S1 1624 aa24.13■■□□□ 1.45
SFXN2-204ENST00000602287 IQSEC2Q5JU85 1478 aa24.13■■□□□ 1.45
SFXN2-204ENST00000602287 MAST1Q9Y2H9 1570 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms