RNA–Protein interactions for RNA: ENST00000601728.1

SNX6P1-201, Transcript of sorting nexin 6 pseudogene 1, humanhuman

BASIC

Gene SNX6P1, Length 1,224 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6P1-201ENST00000601728 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
SNX6P1-201ENST00000601728 NLRP6P59044 892 aa12.93□□□□□ -0.34
SNX6P1-201ENST00000601728 KRTAP3-3Q9BYR6 98 aa12.93□□□□□ -0.34
SNX6P1-201ENST00000601728 KRTAP3-2Q9BYR7 98 aa12.93□□□□□ -0.34
SNX6P1-201ENST00000601728 STK24Q9Y6E0 443 aa12.93□□□□□ -0.34
SNX6P1-201ENST00000601728 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
SNX6P1-201ENST00000601728 FBXO22Q8NEZ5 403 aa12.91□□□□□ -0.34
SNX6P1-201ENST00000601728 STK25O00506 426 aa12.88□□□□□ -0.35
SNX6P1-201ENST00000601728 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
SNX6P1-201ENST00000601728 ERBB3P21860 1342 aa12.87□□□□□ -0.35
SNX6P1-201ENST00000601728 MFRPQ9BY79 579 aa12.85□□□□□ -0.35
SNX6P1-201ENST00000601728 RGL2O15211 777 aa12.82□□□□□ -0.36
SNX6P1-201ENST00000601728 GPR153Q6NV75 609 aa12.8□□□□□ -0.36
SNX6P1-201ENST00000601728 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
SNX6P1-201ENST00000601728 ARSIQ5FYB1 569 aa12.73□□□□□ -0.37
SNX6P1-201ENST00000601728 KIF3CO14782 793 aa12.72□□□□□ -0.37
SNX6P1-201ENST00000601728 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
SNX6P1-201ENST00000601728 C2orf72A6NCS6 295 aa12.7□□□□□ -0.38
SNX6P1-201ENST00000601728 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
SNX6P1-201ENST00000601728 KHSRPQ92945 711 aaKnown RBP eCLIP12.66□□□□□ -0.38
SNX6P1-201ENST00000601728 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
SNX6P1-201ENST00000601728 PPP1R37O75864 691 aa12.62□□□□□ -0.39
SNX6P1-201ENST00000601728 TMC2Q8TDI7 906 aa12.62□□□□□ -0.39
SNX6P1-201ENST00000601728 SLC34A2O95436 690 aa12.6□□□□□ -0.39
SNX6P1-201ENST00000601728 NUDT7P0C024 238 aa12.58□□□□□ -0.4
SNX6P1-201ENST00000601728 RNF166Q96A37 237 aaPredicted RBP12.58□□□□□ -0.4
SNX6P1-201ENST00000601728 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
SNX6P1-201ENST00000601728 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
SNX6P1-201ENST00000601728 MYT1LQ9UL68 1186 aa12.55□□□□□ -0.4
SNX6P1-201ENST00000601728 PTGER2P43116 358 aa12.52□□□□□ -0.41
SNX6P1-201ENST00000601728 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
SNX6P1-201ENST00000601728 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
SNX6P1-201ENST00000601728 LSM11P83369 360 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX6P1-201ENST00000601728 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
SNX6P1-201ENST00000601728 PBX2P40425 430 aa12.48□□□□□ -0.41
SNX6P1-201ENST00000601728 BBXQ8WY36 941 aaPredicted RBP12.46□□□□□ -0.41
SNX6P1-201ENST00000601728 FOXK1P85037 733 aa12.45□□□□□ -0.42
SNX6P1-201ENST00000601728 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
SNX6P1-201ENST00000601728 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
SNX6P1-201ENST00000601728 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
SNX6P1-201ENST00000601728 PLPP6Q8IY26 295 aa12.42□□□□□ -0.42
SNX6P1-201ENST00000601728 PSDA5PKW4 1024 aaPredicted RBP12.41□□□□□ -0.42
SNX6P1-201ENST00000601728 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
SNX6P1-201ENST00000601728 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
SNX6P1-201ENST00000601728 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
SNX6P1-201ENST00000601728 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
SNX6P1-201ENST00000601728 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
SNX6P1-201ENST00000601728 PLCB2Q00722 1185 aa12.38□□□□□ -0.43
SNX6P1-201ENST00000601728 DSG2Q14126 1118 aa12.38□□□□□ -0.43
SNX6P1-201ENST00000601728 RYDENQ9NUL5 291 aaKnown RBP12.36□□□□□ -0.43
SNX6P1-201ENST00000601728 ARHGAP33O14559 1287 aa12.35□□□□□ -0.43
SNX6P1-201ENST00000601728 SLC24A1O60721 1099 aa12.35□□□□□ -0.43
SNX6P1-201ENST00000601728 TBC1D12O60347 775 aa12.34□□□□□ -0.43
SNX6P1-201ENST00000601728 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
SNX6P1-201ENST00000601728 PPP4R3BQ5MIZ7 849 aa12.28□□□□□ -0.44
SNX6P1-201ENST00000601728 CRISPLD2Q9H0B8 497 aa12.28□□□□□ -0.44
SNX6P1-201ENST00000601728 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
SNX6P1-201ENST00000601728 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
SNX6P1-201ENST00000601728 OXER1Q8TDS5 423 aa12.26□□□□□ -0.45
SNX6P1-201ENST00000601728 TK2O00142 265 aa12.25□□□□□ -0.45
SNX6P1-201ENST00000601728 PSEN2P49810 448 aa12.25□□□□□ -0.45
SNX6P1-201ENST00000601728 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
SNX6P1-201ENST00000601728 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
SNX6P1-201ENST00000601728 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX6P1-201ENST00000601728 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
SNX6P1-201ENST00000601728 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
SNX6P1-201ENST00000601728 HRO43593 1189 aa12.2□□□□□ -0.46
SNX6P1-201ENST00000601728 PDE4AP27815 886 aa12.2□□□□□ -0.46
SNX6P1-201ENST00000601728 HCSTQ9UBK5 93 aa12.2□□□□□ -0.46
SNX6P1-201ENST00000601728 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
SNX6P1-201ENST00000601728 KCNH8Q96L42 1107 aa12.18□□□□□ -0.46
SNX6P1-201ENST00000601728 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
SNX6P1-201ENST00000601728 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
SNX6P1-201ENST00000601728 HAP1P54257 671 aaPredicted RBP12.14□□□□□ -0.47
SNX6P1-201ENST00000601728 LARP6Q9BRS8 491 aaKnown RBP12.12□□□□□ -0.47
SNX6P1-201ENST00000601728 BCL2L12Q9HB09 334 aa12.12□□□□□ -0.47
SNX6P1-201ENST00000601728 FOSBP53539 338 aa12.11□□□□□ -0.47
SNX6P1-201ENST00000601728 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SNX6P1-201ENST00000601728 STAC3Q96MF2 364 aa12.11□□□□□ -0.47
SNX6P1-201ENST00000601728 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
SNX6P1-201ENST00000601728 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
SNX6P1-201ENST00000601728 VPS9D1Q9Y2B5 631 aa12.1□□□□□ -0.47
SNX6P1-201ENST00000601728 KCTD12Q96CX2 325 aaKnown RBP12.08□□□□□ -0.48
SNX6P1-201ENST00000601728 EVI5O60447 810 aa12.07□□□□□ -0.48
SNX6P1-201ENST00000601728 MFSD10Q14728 455 aa12.07□□□□□ -0.48
SNX6P1-201ENST00000601728 JPH4Q96JJ6 628 aa12.07□□□□□ -0.48
SNX6P1-201ENST00000601728 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
SNX6P1-201ENST00000601728 PTPREP23469 700 aa12.06□□□□□ -0.48
SNX6P1-201ENST00000601728 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
SNX6P1-201ENST00000601728 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
SNX6P1-201ENST00000601728 ZDHHC16Q969W1 377 aa12.03□□□□□ -0.48
SNX6P1-201ENST00000601728 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
SNX6P1-201ENST00000601728 ZBED2Q9BTP6 218 aa12.01□□□□□ -0.49
SNX6P1-201ENST00000601728 ADAM33Q9BZ11 813 aa12.01□□□□□ -0.49
SNX6P1-201ENST00000601728 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
SNX6P1-201ENST00000601728 BHMG1C9JSJ3 638 aaPredicted RBP11.99□□□□□ -0.49
SNX6P1-201ENST00000601728 CADPS2Q86UW7 1296 aa11.98□□□□□ -0.49
SNX6P1-201ENST00000601728 PTPN5P54829 565 aa11.96□□□□□ -0.49
SNX6P1-201ENST00000601728 MRPL50Q8N5N7 158 aaKnown RBP11.94□□□□□ -0.5
SNX6P1-201ENST00000601728 PCDHGA10Q9Y5H3 936 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms