RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 EFCAB2Q5VUJ9 269 aa36.72■■■■□ 3.47
SSBP4-209ENST00000601357 MAGI2Q86UL8 1455 aa36.69■■■■□ 3.46
SSBP4-209ENST00000601357 BCORL1Q5H9F3 1711 aa36.68■■■■□ 3.46
SSBP4-209ENST00000601357 ARHGAP5Q13017 1502 aa36.68■■■■□ 3.46
SSBP4-209ENST00000601357 CDC42BPBQ9Y5S2 1711 aa36.68■■■■□ 3.46
SSBP4-209ENST00000601357 ZFYVE16Q7Z3T8 1539 aa36.67■■■■□ 3.46
SSBP4-209ENST00000601357 PREX2Q70Z35 1606 aa36.65■■■■□ 3.46
SSBP4-209ENST00000601357 YEATS2Q9ULM3 1422 aa36.65■■■■□ 3.46
SSBP4-209ENST00000601357 CEP162Q5TB80 1403 aa36.59■■■■□ 3.45
SSBP4-209ENST00000601357 SIGLEC1Q9BZZ2 1709 aa36.59■■■■□ 3.45
SSBP4-209ENST00000601357 CDC42BPAQ5VT25 1732 aa36.57■■■■□ 3.45
SSBP4-209ENST00000601357 ARID4BQ4LE39 1312 aaPredicted RBP36.57■■■■□ 3.44
SSBP4-209ENST00000601357 ZNF518AQ6AHZ1 1483 aa36.56■■■■□ 3.44
SSBP4-209ENST00000601357 KDM5CP41229 1560 aa36.56■■■■□ 3.44
SSBP4-209ENST00000601357 HECW2Q9P2P5 1572 aa36.55■■■■□ 3.44
SSBP4-209ENST00000601357 MADDQ8WXG6 1647 aa36.55■■■■□ 3.44
SSBP4-209ENST00000601357 PTPRMP28827 1452 aa36.55■■■■□ 3.44
SSBP4-209ENST00000601357 ABCC1P33527 1531 aa36.5■■■■□ 3.43
SSBP4-209ENST00000601357 ARHGEF12Q9NZN5 1544 aa36.46■■■■□ 3.43
SSBP4-209ENST00000601357 ATP10AO60312 1499 aa36.46■■■■□ 3.43
SSBP4-209ENST00000601357 ITSN2Q9NZM3 1697 aa36.45■■■■□ 3.43
SSBP4-209ENST00000601357 AFAP1Q8N556 730 aa36.45■■■■□ 3.43
SSBP4-209ENST00000601357 GPATCH8Q9UKJ3 1502 aaKnown RBP36.43■■■■□ 3.42
SSBP4-209ENST00000601357 C9orf84Q5VXU9 1444 aa36.42■■■■□ 3.42
SSBP4-209ENST00000601357 RIMS1Q86UR5 1692 aaKnown RBP36.42■■■■□ 3.42
SSBP4-209ENST00000601357 TRAPPC8Q9Y2L5 1435 aa36.39■■■■□ 3.42
SSBP4-209ENST00000601357 MLH3Q9UHC1 1453 aa36.38■■■■□ 3.41
SSBP4-209ENST00000601357 SAMD9LQ8IVG5 1584 aa36.38■■■■□ 3.41
SSBP4-209ENST00000601357 MTUS2Q5JR59 1369 aa36.38■■■■□ 3.41
SSBP4-209ENST00000601357 DIP2CQ9Y2E4 1556 aa36.36■■■■□ 3.41
SSBP4-209ENST00000601357 LOC105371045A0A1W2PR82 267 aa36.35■■■■□ 3.41
SSBP4-209ENST00000601357 ABCA6Q8N139 1617 aa36.34■■■■□ 3.41
SSBP4-209ENST00000601357 EHBP1L1Q8N3D4 1523 aa36.34■■■■□ 3.41
SSBP4-209ENST00000601357 REREQ9P2R6 1566 aa36.33■■■■□ 3.41
SSBP4-209ENST00000601357 FER1L4A9Z1Z3 1794 aa36.3■■■■□ 3.4
SSBP4-209ENST00000601357 CCNB3Q8WWL7 1395 aa36.28■■■■□ 3.4
SSBP4-209ENST00000601357 SYCP2Q9BX26 1530 aa36.28■■■■□ 3.4
SSBP4-209ENST00000601357 KIDINS220Q9ULH0 1771 aa36.27■■■■□ 3.4
SSBP4-209ENST00000601357 TIAM1Q13009 1591 aa36.27■■■■□ 3.4
SSBP4-209ENST00000601357 ZNF777Q9ULD5 760 aaPredicted RBP36.25■■■■□ 3.39
SSBP4-209ENST00000601357 MLECQ14165 292 aa36.24■■■■□ 3.39
SSBP4-209ENST00000601357 KIAA1107Q9UPP5 1409 aa36.24■■■■□ 3.39
SSBP4-209ENST00000601357 CFDP1Q9UEE9 299 aaPredicted RBP36.23■■■■□ 3.39
SSBP4-209ENST00000601357 MYT1LQ9UL68 1186 aa36.22■■■■□ 3.39
SSBP4-209ENST00000601357 PLEKHH2Q8IVE3 1493 aa36.22■■■■□ 3.39
SSBP4-209ENST00000601357 VPS8Q8N3P4 1428 aa36.21■■■■□ 3.39
SSBP4-209ENST00000601357 AGLP35573 1532 aa36.18■■■■□ 3.38
SSBP4-209ENST00000601357 LMTK3Q96Q04 1460 aa36.18■■■■□ 3.38
SSBP4-209ENST00000601357 HNRNPMP52272 730 aaKnown RBP eCLIP36.16■■■■□ 3.381e-6■■□□□ 12.6
SSBP4-209ENST00000601357 SUPT6HQ7KZ85 1726 aaKnown RBP36.14■■■■□ 3.38
SSBP4-209ENST00000601357 INO80Q9ULG1 1556 aaPredicted RBP36.12■■■■□ 3.37
SSBP4-209ENST00000601357 NCOA2Q15596 1464 aa36.1■■■■□ 3.37
SSBP4-209ENST00000601357 SPAG9O60271 1321 aaKnown RBP36.09■■■■□ 3.37
SSBP4-209ENST00000601357 ATP7AQ04656 1500 aa36.09■■■■□ 3.37
SSBP4-209ENST00000601357 ZNF644Q9H582 1327 aaPredicted RBP36.07■■■■□ 3.36
SSBP4-209ENST00000601357 MBD5Q9P267 1494 aa36.05■■■■□ 3.36
SSBP4-209ENST00000601357 PLPPR3Q6T4P5 718 aa36.03■■■■□ 3.36
SSBP4-209ENST00000601357 LRRC9Q6ZRR7 1453 aa36.03■■■■□ 3.36
SSBP4-209ENST00000601357 MAP3K1Q13233 1512 aa36.03■■■■□ 3.36
SSBP4-209ENST00000601357 PLXNC1O60486 1568 aa36■■■■□ 3.35
SSBP4-209ENST00000601357 PREX1Q8TCU6 1659 aa35.95■■■■□ 3.35
SSBP4-209ENST00000601357 CEBPAP49715 358 aaPredicted RBP35.95■■■■□ 3.35
SSBP4-209ENST00000601357 C3P01024 1663 aa35.94■■■■□ 3.34
SSBP4-209ENST00000601357 CAMSAP2Q08AD1 1489 aa35.94■■■■□ 3.34
SSBP4-209ENST00000601357 A2MP01023 1474 aa35.93■■■■□ 3.34
SSBP4-209ENST00000601357 ADGBQ8N7X0 1667 aa35.93■■■■□ 3.34
SSBP4-209ENST00000601357 RTEL1-TNFRSF6BF6WH68 1400 aa35.91■■■■□ 3.34
SSBP4-209ENST00000601357 CNTLNQ9NXG0 1405 aa35.89■■■■□ 3.34
SSBP4-209ENST00000601357 HSPA2P54652 639 aa35.88■■■■□ 3.33
SSBP4-209ENST00000601357 CCDC141Q6ZP82 1450 aa35.87■■■■□ 3.33
SSBP4-209ENST00000601357 KANK4Q5T7N3 995 aaPredicted RBP35.87■■■■□ 3.33
SSBP4-209ENST00000601357 MROH2AA6NES4 1674 aa35.85■■■■□ 3.33
SSBP4-209ENST00000601357 ARHGEF5Q12774 1597 aa35.84■■■■□ 3.33
SSBP4-209ENST00000601357 ESF1Q9H501 851 aaKnown RBP35.83■■■■□ 3.33
SSBP4-209ENST00000601357 SETD1BQ9UPS6 1966 aaKnown RBP35.83■■■■□ 3.33
SSBP4-209ENST00000601357 RSPH4AQ5TD94 716 aa35.81■■■■□ 3.32
SSBP4-209ENST00000601357 UHRF1BP1Q6BDS2 1440 aa35.76■■■■□ 3.32
SSBP4-209ENST00000601357 DHX29Q7Z478 1369 aaKnown RBP35.75■■■■□ 3.31
SSBP4-209ENST00000601357 CLTCQ00610 1675 aaKnown RBP35.75■■■■□ 3.31
SSBP4-209ENST00000601357 MYOM3Q5VTT5 1437 aa35.74■■■■□ 3.31
SSBP4-209ENST00000601357 ILDR1Q86SU0 546 aaPredicted RBP35.74■■■■□ 3.31
SSBP4-209ENST00000601357 MIA2Q96PC5 1412 aa35.73■■■■□ 3.31
SSBP4-209ENST00000601357 ZMYM3Q14202 1370 aa35.71■■■■□ 3.31
SSBP4-209ENST00000601357 NPATQ14207 1427 aa35.69■■■■□ 3.3
SSBP4-209ENST00000601357 GGT6Q6P531 493 aa35.67■■■■□ 3.3
SSBP4-209ENST00000601357 PPP6R1Q9UPN7 881 aa35.67■■■■□ 3.3
SSBP4-209ENST00000601357 MAST1Q9Y2H9 1570 aa35.67■■■■□ 3.3
SSBP4-209ENST00000601357 STRCQ7RTU9 1775 aa35.65■■■■□ 3.3
SSBP4-209ENST00000601357 TSPY4P0CV99 314 aa35.62■■■■□ 3.29
SSBP4-209ENST00000601357 TSPY10P0CW01 314 aa35.62■■■■□ 3.29
SSBP4-209ENST00000601357 APLP2Q06481 763 aa35.61■■■■□ 3.29
SSBP4-209ENST00000601357 FAM135AQ9P2D6 1515 aa35.57■■■■□ 3.28
SSBP4-209ENST00000601357 PTPRKQ15262 1439 aa35.57■■■■□ 3.28
SSBP4-209ENST00000601357 KIF3BO15066 747 aa35.56■■■■□ 3.28
SSBP4-209ENST00000601357 PTPN23Q9H3S7 1636 aa35.53■■■■□ 3.28
SSBP4-209ENST00000601357 MYO3AQ8NEV4 1616 aa35.52■■■■□ 3.28
SSBP4-209ENST00000601357 KDM5DQ9BY66 1539 aa35.52■■■■□ 3.28
SSBP4-209ENST00000601357 ZNF142P52746 1687 aaPredicted RBP35.51■■■■□ 3.28
SSBP4-209ENST00000601357 CROCC2H7BZ55 1655 aa35.49■■■■□ 3.27
SSBP4-209ENST00000601357 RNF17Q9BXT8 1623 aaKnown RBP35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms