RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 GLI2P10070 1586 aa25.1■■□□□ 1.61
U2AF1L4-220ENST00000600296 PCGF6Q9BYE7 350 aa25.08■■□□□ 1.61
U2AF1L4-220ENST00000600296 DIP2BQ9P265 1576 aa25.07■■□□□ 1.6
U2AF1L4-220ENST00000600296 CAMSAP2Q08AD1 1489 aa25.06■■□□□ 1.6
U2AF1L4-220ENST00000600296 SAMD9LQ8IVG5 1584 aa25.05■■□□□ 1.6
U2AF1L4-220ENST00000600296 DNMT1P26358 1616 aaKnown RBP25.05■■□□□ 1.6
U2AF1L4-220ENST00000600296 MAP3K4Q9Y6R4 1608 aa25.04■■□□□ 1.6
U2AF1L4-220ENST00000600296 PLCH2O75038 1416 aa25.04■■□□□ 1.6
U2AF1L4-220ENST00000600296 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
U2AF1L4-220ENST00000600296 ARHGAP5Q13017 1502 aa25.01■■□□□ 1.59
U2AF1L4-220ENST00000600296 ARHGEF5Q12774 1597 aa24.99■■□□□ 1.59
U2AF1L4-220ENST00000600296 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
U2AF1L4-220ENST00000600296 CFAP74Q9C0B2 1584 aa24.98■■□□□ 1.59
U2AF1L4-220ENST00000600296 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
U2AF1L4-220ENST00000600296 ABCC1P33527 1531 aa24.96■■□□□ 1.59
U2AF1L4-220ENST00000600296 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
U2AF1L4-220ENST00000600296 PLEKHH2Q8IVE3 1493 aa24.94■■□□□ 1.58
U2AF1L4-220ENST00000600296 ADGBQ8N7X0 1667 aa24.93■■□□□ 1.58
U2AF1L4-220ENST00000600296 DAPK1P53355 1430 aa24.91■■□□□ 1.58
U2AF1L4-220ENST00000600296 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
U2AF1L4-220ENST00000600296 PPRC1Q5VV67 1664 aaKnown RBP24.91■■□□□ 1.58
U2AF1L4-220ENST00000600296 TSPOAP1O95153 1857 aa24.9■■□□□ 1.58
U2AF1L4-220ENST00000600296 PTPRKQ15262 1439 aa24.9■■□□□ 1.58
U2AF1L4-220ENST00000600296 KIAA1107Q9UPP5 1409 aa24.9■■□□□ 1.58
U2AF1L4-220ENST00000600296 MBD5Q9P267 1494 aa24.89■■□□□ 1.58
U2AF1L4-220ENST00000600296 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
U2AF1L4-220ENST00000600296 ZNF644Q9H582 1327 aaPredicted RBP24.89■■□□□ 1.58
U2AF1L4-220ENST00000600296 CD109Q6YHK3 1445 aa24.89■■□□□ 1.58
U2AF1L4-220ENST00000600296 FANCAO15360 1455 aa24.89■■□□□ 1.57
U2AF1L4-220ENST00000600296 ABCC5O15440 1437 aa24.88■■□□□ 1.57
U2AF1L4-220ENST00000600296 GCC2Q8IWJ2 1684 aa24.88■■□□□ 1.57
U2AF1L4-220ENST00000600296 AKNAQ7Z591 1439 aa24.86■■□□□ 1.57
U2AF1L4-220ENST00000600296 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
U2AF1L4-220ENST00000600296 CCDC141Q6ZP82 1450 aa24.84■■□□□ 1.57
U2AF1L4-220ENST00000600296 ARHGEF12Q9NZN5 1544 aa24.84■■□□□ 1.57
U2AF1L4-220ENST00000600296 ADGRL2O95490 1459 aa24.83■■□□□ 1.57
U2AF1L4-220ENST00000600296 NEO1Q92859 1461 aa24.83■■□□□ 1.57
U2AF1L4-220ENST00000600296 EFCAB2Q5VUJ9 269 aa24.83■■□□□ 1.57
U2AF1L4-220ENST00000600296 ZNF777Q9ULD5 760 aaPredicted RBP24.8■■□□□ 1.56
U2AF1L4-220ENST00000600296 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
U2AF1L4-220ENST00000600296 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
U2AF1L4-220ENST00000600296 ADGRL1O94910 1474 aa24.77■■□□□ 1.56
U2AF1L4-220ENST00000600296 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
U2AF1L4-220ENST00000600296 ITGAEP38570 1179 aa24.75■■□□□ 1.55
U2AF1L4-220ENST00000600296 RSPH4AQ5TD94 716 aa24.74■■□□□ 1.55
U2AF1L4-220ENST00000600296 C9orf84Q5VXU9 1444 aa24.74■■□□□ 1.55
U2AF1L4-220ENST00000600296 KDM6BO15054 1643 aa24.73■■□□□ 1.55
U2AF1L4-220ENST00000600296 INO80Q9ULG1 1556 aaPredicted RBP24.73■■□□□ 1.55
U2AF1L4-220ENST00000600296 TEX14Q8IWB6 1497 aa24.73■■□□□ 1.55
U2AF1L4-220ENST00000600296 RICTORQ6R327 1708 aa24.72■■□□□ 1.55
U2AF1L4-220ENST00000600296 KDM5CP41229 1560 aa24.72■■□□□ 1.55
U2AF1L4-220ENST00000600296 NAIPQ13075 1403 aa24.72■■□□□ 1.55
U2AF1L4-220ENST00000600296 COL17A1Q9UMD9 1497 aaPredicted RBP24.71■■□□□ 1.55
U2AF1L4-220ENST00000600296 TRAPPC8Q9Y2L5 1435 aa24.71■■□□□ 1.55
U2AF1L4-220ENST00000600296 SETD5Q9C0A6 1442 aa24.7■■□□□ 1.55
U2AF1L4-220ENST00000600296 HNRNPMP52272 730 aaKnown RBP eCLIP24.7■■□□□ 1.54
U2AF1L4-220ENST00000600296 ZFYVE16Q7Z3T8 1539 aa24.7■■□□□ 1.54
U2AF1L4-220ENST00000600296 NCOA1Q15788 1441 aa24.69■■□□□ 1.54
U2AF1L4-220ENST00000600296 SCAPERQ9BY12 1400 aa24.69■■□□□ 1.54
U2AF1L4-220ENST00000600296 POGZQ7Z3K3 1410 aa24.68■■□□□ 1.54
U2AF1L4-220ENST00000600296 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
U2AF1L4-220ENST00000600296 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
U2AF1L4-220ENST00000600296 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
U2AF1L4-220ENST00000600296 KIDINS220Q9ULH0 1771 aa24.65■■□□□ 1.54
U2AF1L4-220ENST00000600296 RAB3GAP2Q9H2M9 1393 aa24.64■■□□□ 1.53
U2AF1L4-220ENST00000600296 ATP7AQ04656 1500 aa24.63■■□□□ 1.53
U2AF1L4-220ENST00000600296 ANKRD30AQ9BXX3 1397 aa24.63■■□□□ 1.53
U2AF1L4-220ENST00000600296 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
U2AF1L4-220ENST00000600296 HRCP23327 699 aa24.61■■□□□ 1.53
U2AF1L4-220ENST00000600296 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
U2AF1L4-220ENST00000600296 CHIC2Q9UKJ5 165 aa24.61■■□□□ 1.53
U2AF1L4-220ENST00000600296 DENND4BO75064 1496 aaPredicted RBP24.61■■□□□ 1.53
U2AF1L4-220ENST00000600296 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
U2AF1L4-220ENST00000600296 TSPY4P0CV99 314 aa24.6■■□□□ 1.53
U2AF1L4-220ENST00000600296 TSPY10P0CW01 314 aa24.6■■□□□ 1.53
U2AF1L4-220ENST00000600296 MLH3Q9UHC1 1453 aa24.58■■□□□ 1.52
U2AF1L4-220ENST00000600296 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
U2AF1L4-220ENST00000600296 KIF15Q9NS87 1388 aa24.55■■□□□ 1.52
U2AF1L4-220ENST00000600296 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
U2AF1L4-220ENST00000600296 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
U2AF1L4-220ENST00000600296 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
U2AF1L4-220ENST00000600296 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
U2AF1L4-220ENST00000600296 EIF2AK4Q9P2K8 1649 aaKnown RBP24.51■■□□□ 1.51
U2AF1L4-220ENST00000600296 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
U2AF1L4-220ENST00000600296 ANKRD50Q9ULJ7 1429 aa24.51■■□□□ 1.51
U2AF1L4-220ENST00000600296 ERBINQ96RT1 1412 aa24.5■■□□□ 1.51
U2AF1L4-220ENST00000600296 UNC13BO14795 1591 aa24.5■■□□□ 1.51
U2AF1L4-220ENST00000600296 DIP2CQ9Y2E4 1556 aa24.49■■□□□ 1.51
U2AF1L4-220ENST00000600296 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
U2AF1L4-220ENST00000600296 KDM5DQ9BY66 1539 aa24.47■■□□□ 1.51
U2AF1L4-220ENST00000600296 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
U2AF1L4-220ENST00000600296 ACIN1Q9UKV3 1341 aaKnown RBP24.46■■□□□ 1.51
U2AF1L4-220ENST00000600296 DEPDC5O75140 1603 aa24.46■■□□□ 1.51
U2AF1L4-220ENST00000600296 MAGI2Q86UL8 1455 aa24.45■■□□□ 1.51
U2AF1L4-220ENST00000600296 RAPGEF3O95398 923 aa24.42■■□□□ 1.5
U2AF1L4-220ENST00000600296 REREQ9P2R6 1566 aa24.42■■□□□ 1.5
U2AF1L4-220ENST00000600296 ARHGEF40Q8TER5 1519 aa24.4■■□□□ 1.5
U2AF1L4-220ENST00000600296 RNF17Q9BXT8 1623 aaKnown RBP24.4■■□□□ 1.5
U2AF1L4-220ENST00000600296 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
U2AF1L4-220ENST00000600296 A2MP01023 1474 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms