RNA–Protein interactions for RNA: ENST00000600252.5

SYDE1-203, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 2 BASIC

Gene SYDE1, Length 3,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-203ENST00000600252 TONSLQ96HA7 1378 aa17.85■□□□□ 0.45
SYDE1-203ENST00000600252 ARID4BQ4LE39 1312 aaPredicted RBP17.83■□□□□ 0.45
SYDE1-203ENST00000600252 MLECQ14165 292 aa17.83■□□□□ 0.45
SYDE1-203ENST00000600252 CHD1O14646 1710 aa17.83■□□□□ 0.44
SYDE1-203ENST00000600252 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
SYDE1-203ENST00000600252 GGT6Q6P531 493 aa17.82■□□□□ 0.44
SYDE1-203ENST00000600252 AFAP1Q8N556 730 aa17.82■□□□□ 0.44
SYDE1-203ENST00000600252 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
SYDE1-203ENST00000600252 SPAG9O60271 1321 aaKnown RBP17.81■□□□□ 0.44
SYDE1-203ENST00000600252 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
SYDE1-203ENST00000600252 EHBP1L1Q8N3D4 1523 aa17.8■□□□□ 0.44
SYDE1-203ENST00000600252 ATP10BO94823 1461 aa17.8■□□□□ 0.44
SYDE1-203ENST00000600252 NEFLP07196 543 aa17.79■□□□□ 0.44
SYDE1-203ENST00000600252 ARHGEF11O15085 1522 aa17.79■□□□□ 0.44
SYDE1-203ENST00000600252 ANKRD30AQ9BXX3 1397 aa17.78■□□□□ 0.44
SYDE1-203ENST00000600252 RAPGEF6Q8TEU7 1601 aa17.77■□□□□ 0.44
SYDE1-203ENST00000600252 HIRIP3Q9BW71 556 aaPredicted RBP17.77■□□□□ 0.43
SYDE1-203ENST00000600252 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
SYDE1-203ENST00000600252 KIF3BO15066 747 aa17.76■□□□□ 0.43
SYDE1-203ENST00000600252 ARHGAP5Q13017 1502 aa17.75■□□□□ 0.43
SYDE1-203ENST00000600252 SAMD9Q5K651 1589 aa17.74■□□□□ 0.43
SYDE1-203ENST00000600252 PKD2Q13563 968 aa17.74■□□□□ 0.43
SYDE1-203ENST00000600252 CCDC136Q96JN2 1154 aa17.74■□□□□ 0.43
SYDE1-203ENST00000600252 NUP155O75694 1391 aa17.73■□□□□ 0.43
SYDE1-203ENST00000600252 MPHOSPH9Q99550 1183 aa17.73■□□□□ 0.43
SYDE1-203ENST00000600252 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
SYDE1-203ENST00000600252 RSPH4AQ5TD94 716 aa17.72■□□□□ 0.43
SYDE1-203ENST00000600252 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
SYDE1-203ENST00000600252 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
SYDE1-203ENST00000600252 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
SYDE1-203ENST00000600252 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
SYDE1-203ENST00000600252 RAPGEF3O95398 923 aa17.69■□□□□ 0.42
SYDE1-203ENST00000600252 ZNF316A6NFI3 1004 aaPredicted RBP17.68■□□□□ 0.42
SYDE1-203ENST00000600252 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
SYDE1-203ENST00000600252 MIA2Q96PC5 1412 aa17.64■□□□□ 0.42
SYDE1-203ENST00000600252 KIF15Q9NS87 1388 aa17.64■□□□□ 0.41
SYDE1-203ENST00000600252 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
SYDE1-203ENST00000600252 ASXL2Q76L83 1435 aa17.63■□□□□ 0.41
SYDE1-203ENST00000600252 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.61■□□□□ 0.41
SYDE1-203ENST00000600252 CD109Q6YHK3 1445 aa17.6■□□□□ 0.41
SYDE1-203ENST00000600252 GPATCH8Q9UKJ3 1502 aaKnown RBP17.6■□□□□ 0.41
SYDE1-203ENST00000600252 KIF14Q15058 1648 aa17.6■□□□□ 0.41
SYDE1-203ENST00000600252 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SYDE1-203ENST00000600252 SCAPERQ9BY12 1400 aa17.6■□□□□ 0.41
SYDE1-203ENST00000600252 ABCC2Q92887 1545 aa17.59■□□□□ 0.41
SYDE1-203ENST00000600252 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
SYDE1-203ENST00000600252 DAPK1P53355 1430 aa17.58■□□□□ 0.4
SYDE1-203ENST00000600252 KANK1Q14678 1352 aa17.57■□□□□ 0.4
SYDE1-203ENST00000600252 CAMSAP2Q08AD1 1489 aa17.57■□□□□ 0.4
SYDE1-203ENST00000600252 C9orf84Q5VXU9 1444 aa17.57■□□□□ 0.4
SYDE1-203ENST00000600252 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
SYDE1-203ENST00000600252 ANKRD50Q9ULJ7 1429 aa17.56■□□□□ 0.4
SYDE1-203ENST00000600252 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
SYDE1-203ENST00000600252 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
SYDE1-203ENST00000600252 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
SYDE1-203ENST00000600252 ABCC5O15440 1437 aa17.54■□□□□ 0.4
SYDE1-203ENST00000600252 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
SYDE1-203ENST00000600252 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
SYDE1-203ENST00000600252 PTPRKQ15262 1439 aa17.53■□□□□ 0.4
SYDE1-203ENST00000600252 WDR7Q9Y4E6 1490 aa17.52■□□□□ 0.39
SYDE1-203ENST00000600252 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
SYDE1-203ENST00000600252 NBR1Q14596 966 aa17.5■□□□□ 0.39
SYDE1-203ENST00000600252 NAIPQ13075 1403 aa17.5■□□□□ 0.39
SYDE1-203ENST00000600252 ABCA8O94911 1581 aa17.5■□□□□ 0.39
SYDE1-203ENST00000600252 FANCAO15360 1455 aa17.49■□□□□ 0.39
SYDE1-203ENST00000600252 L3MBTL2Q969R5 705 aa17.49■□□□□ 0.39
SYDE1-203ENST00000600252 HFM1A2PYH4 1435 aa17.49■□□□□ 0.39
SYDE1-203ENST00000600252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.48■□□□□ 0.39
SYDE1-203ENST00000600252 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
SYDE1-203ENST00000600252 ADGRL1O94910 1474 aa17.47■□□□□ 0.39
SYDE1-203ENST00000600252 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
SYDE1-203ENST00000600252 MIER1Q8N108 512 aa17.46■□□□□ 0.39
SYDE1-203ENST00000600252 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
SYDE1-203ENST00000600252 PLCH2O75038 1416 aa17.45■□□□□ 0.38
SYDE1-203ENST00000600252 PPP1R15AO75807 674 aaPredicted RBP17.45■□□□□ 0.38
SYDE1-203ENST00000600252 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
SYDE1-203ENST00000600252 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
SYDE1-203ENST00000600252 SUPT16HQ9Y5B9 1047 aaKnown RBP17.44■□□□□ 0.38
SYDE1-203ENST00000600252 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
SYDE1-203ENST00000600252 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
SYDE1-203ENST00000600252 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
SYDE1-203ENST00000600252 CARD11Q9BXL7 1154 aa17.42■□□□□ 0.38
SYDE1-203ENST00000600252 AKNAQ7Z591 1439 aa17.41■□□□□ 0.38
SYDE1-203ENST00000600252 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
SYDE1-203ENST00000600252 SYCP2Q9BX26 1530 aa17.4■□□□□ 0.38
SYDE1-203ENST00000600252 FKBP8Q14318 412 aa17.39■□□□□ 0.37
SYDE1-203ENST00000600252 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
SYDE1-203ENST00000600252 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
SYDE1-203ENST00000600252 ROCK1Q13464 1354 aa17.36■□□□□ 0.37
SYDE1-203ENST00000600252 CCDC144AA2RUR9 1427 aa17.35■□□□□ 0.37
SYDE1-203ENST00000600252 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
SYDE1-203ENST00000600252 UHRF1BP1LA0JNW5 1464 aa17.35■□□□□ 0.37
SYDE1-203ENST00000600252 ANP32CO43423 234 aa17.34■□□□□ 0.37
SYDE1-203ENST00000600252 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.33■□□□□ 0.37
SYDE1-203ENST00000600252 ZCCHC11Q5TAX3 1644 aaKnown RBP17.33■□□□□ 0.36
SYDE1-203ENST00000600252 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
SYDE1-203ENST00000600252 DENND4BO75064 1496 aaPredicted RBP17.31■□□□□ 0.36
SYDE1-203ENST00000600252 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
SYDE1-203ENST00000600252 TCOF1Q13428 1488 aaKnown RBP17.31■□□□□ 0.36
SYDE1-203ENST00000600252 GLIPR1L2Q4G1C9 344 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms