RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 KDM5CP41229 1560 aa14.71□□□□□ -0.05
C19orf54-210ENST00000600139 ARHGEF12Q9NZN5 1544 aa14.71□□□□□ -0.06
C19orf54-210ENST00000600139 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
C19orf54-210ENST00000600139 FMN1Q68DA7 1419 aa14.69□□□□□ -0.06
C19orf54-210ENST00000600139 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
C19orf54-210ENST00000600139 FER1L4A9Z1Z3 1794 aa14.68□□□□□ -0.06
C19orf54-210ENST00000600139 CDC42BPBQ9Y5S2 1711 aa14.68□□□□□ -0.06
C19orf54-210ENST00000600139 DIP2CQ9Y2E4 1556 aa14.66□□□□□ -0.06
C19orf54-210ENST00000600139 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
C19orf54-210ENST00000600139 ABCA6Q8N139 1617 aa14.65□□□□□ -0.06
C19orf54-210ENST00000600139 ARID4BQ4LE39 1312 aaPredicted RBP14.65□□□□□ -0.06
C19orf54-210ENST00000600139 PREX2Q70Z35 1606 aa14.64□□□□□ -0.07
C19orf54-210ENST00000600139 C9orf84Q5VXU9 1444 aa14.64□□□□□ -0.07
C19orf54-210ENST00000600139 ATP10AO60312 1499 aa14.63□□□□□ -0.07
C19orf54-210ENST00000600139 REREQ9P2R6 1566 aa14.63□□□□□ -0.07
C19orf54-210ENST00000600139 ABCC1P33527 1531 aa14.62□□□□□ -0.07
C19orf54-210ENST00000600139 HSPA2P54652 639 aa14.62□□□□□ -0.07
C19orf54-210ENST00000600139 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
C19orf54-210ENST00000600139 ZNF518AQ6AHZ1 1483 aa14.61□□□□□ -0.07
C19orf54-210ENST00000600139 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
C19orf54-210ENST00000600139 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
C19orf54-210ENST00000600139 CDC42BPAQ5VT25 1732 aa14.61□□□□□ -0.07
C19orf54-210ENST00000600139 TRAPPC8Q9Y2L5 1435 aa14.6□□□□□ -0.07
C19orf54-210ENST00000600139 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
C19orf54-210ENST00000600139 FBXO41Q8TF61 875 aa14.59□□□□□ -0.07
C19orf54-210ENST00000600139 EFCAB2Q5VUJ9 269 aa14.58□□□□□ -0.08
C19orf54-210ENST00000600139 AFAP1Q8N556 730 aa14.58□□□□□ -0.08
C19orf54-210ENST00000600139 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
C19orf54-210ENST00000600139 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
C19orf54-210ENST00000600139 MLH3Q9UHC1 1453 aa14.57□□□□□ -0.08
C19orf54-210ENST00000600139 PREX1Q8TCU6 1659 aa14.57□□□□□ -0.08
C19orf54-210ENST00000600139 MLECQ14165 292 aa14.56□□□□□ -0.08
C19orf54-210ENST00000600139 AGLP35573 1532 aa14.56□□□□□ -0.08
C19orf54-210ENST00000600139 SAMD9LQ8IVG5 1584 aa14.55□□□□□ -0.08
C19orf54-210ENST00000600139 CCDC18Q5T9S5 1454 aa14.54□□□□□ -0.08
C19orf54-210ENST00000600139 FYCO1Q9BQS8 1478 aa14.54□□□□□ -0.08
C19orf54-210ENST00000600139 C3P01024 1663 aa14.54□□□□□ -0.08
C19orf54-210ENST00000600139 CLIP1P30622 1438 aa14.53□□□□□ -0.08
C19orf54-210ENST00000600139 CEBPAP49715 358 aaPredicted RBP14.53□□□□□ -0.08
C19orf54-210ENST00000600139 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.09
C19orf54-210ENST00000600139 PLPPR3Q6T4P5 718 aa14.51□□□□□ -0.09
C19orf54-210ENST00000600139 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
C19orf54-210ENST00000600139 CDK11AQ9UQ88 783 aaPredicted RBP14.5□□□□□ -0.09
C19orf54-210ENST00000600139 SYCP2Q9BX26 1530 aa14.49□□□□□ -0.09
C19orf54-210ENST00000600139 PLXNC1O60486 1568 aa14.48□□□□□ -0.09
C19orf54-210ENST00000600139 INO80Q9ULG1 1556 aaPredicted RBP14.48□□□□□ -0.09
C19orf54-210ENST00000600139 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
C19orf54-210ENST00000600139 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
C19orf54-210ENST00000600139 MROH2AA6NES4 1674 aa14.43□□□□□ -0.1
C19orf54-210ENST00000600139 UHRF1BP1Q6BDS2 1440 aa14.42□□□□□ -0.1
C19orf54-210ENST00000600139 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
C19orf54-210ENST00000600139 LTBP4Q8N2S1 1624 aa14.42□□□□□ -0.1
C19orf54-210ENST00000600139 CERKQ8TCT0 537 aa14.42□□□□□ -0.1
C19orf54-210ENST00000600139 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
C19orf54-210ENST00000600139 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
C19orf54-210ENST00000600139 SUPT6HQ7KZ85 1726 aaKnown RBP14.4□□□□□ -0.1
C19orf54-210ENST00000600139 NCOA1Q15788 1441 aa14.4□□□□□ -0.1
C19orf54-210ENST00000600139 PTPRTO14522 1441 aa14.38□□□□□ -0.11
C19orf54-210ENST00000600139 ZNF142P52746 1687 aaPredicted RBP14.37□□□□□ -0.11
C19orf54-210ENST00000600139 CLTCQ00610 1675 aaKnown RBP14.37□□□□□ -0.11
C19orf54-210ENST00000600139 CNTLNQ9NXG0 1405 aa14.37□□□□□ -0.11
C19orf54-210ENST00000600139 NPATQ14207 1427 aa14.36□□□□□ -0.11
C19orf54-210ENST00000600139 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
C19orf54-210ENST00000600139 MYO3AQ8NEV4 1616 aa14.36□□□□□ -0.11
C19orf54-210ENST00000600139 ZNF644Q9H582 1327 aaPredicted RBP14.36□□□□□ -0.11
C19orf54-210ENST00000600139 A2MP01023 1474 aa14.35□□□□□ -0.11
C19orf54-210ENST00000600139 ADGBQ8N7X0 1667 aa14.35□□□□□ -0.11
C19orf54-210ENST00000600139 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
C19orf54-210ENST00000600139 PTPRKQ15262 1439 aa14.34□□□□□ -0.11
C19orf54-210ENST00000600139 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.11
C19orf54-210ENST00000600139 CEP162Q5TB80 1403 aa14.33□□□□□ -0.11
C19orf54-210ENST00000600139 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.12
C19orf54-210ENST00000600139 SPAG9O60271 1321 aaKnown RBP14.33□□□□□ -0.12
C19orf54-210ENST00000600139 ZMYM3Q14202 1370 aa14.33□□□□□ -0.12
C19orf54-210ENST00000600139 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
C19orf54-210ENST00000600139 CCNB3Q8WWL7 1395 aa14.32□□□□□ -0.12
C19orf54-210ENST00000600139 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
C19orf54-210ENST00000600139 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
C19orf54-210ENST00000600139 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
C19orf54-210ENST00000600139 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
C19orf54-210ENST00000600139 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
C19orf54-210ENST00000600139 PLA2R1Q13018 1463 aa14.27□□□□□ -0.12
C19orf54-210ENST00000600139 NCOA2Q15596 1464 aa14.27□□□□□ -0.12
C19orf54-210ENST00000600139 CAMSAP2Q08AD1 1489 aa14.26□□□□□ -0.13
C19orf54-210ENST00000600139 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
C19orf54-210ENST00000600139 NEURL4Q96JN8 1562 aa14.26□□□□□ -0.13
C19orf54-210ENST00000600139 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
C19orf54-210ENST00000600139 DNMT1P26358 1616 aaKnown RBP14.24□□□□□ -0.13
C19orf54-210ENST00000600139 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
C19orf54-210ENST00000600139 DHX29Q7Z478 1369 aaKnown RBP14.23□□□□□ -0.13
C19orf54-210ENST00000600139 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
C19orf54-210ENST00000600139 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
C19orf54-210ENST00000600139 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
C19orf54-210ENST00000600139 A2ML1A8K2U0 1454 aa14.22□□□□□ -0.13
C19orf54-210ENST00000600139 MROH1Q8NDA8 1641 aa14.22□□□□□ -0.13
C19orf54-210ENST00000600139 ZNF335Q9H4Z2 1342 aaPredicted RBP14.21□□□□□ -0.13
C19orf54-210ENST00000600139 ILDR2Q71H61 639 aa14.21□□□□□ -0.13
C19orf54-210ENST00000600139 PZPP20742 1482 aa14.2□□□□□ -0.14
C19orf54-210ENST00000600139 RNF17Q9BXT8 1623 aaKnown RBP14.2□□□□□ -0.14
C19orf54-210ENST00000600139 KDM5DQ9BY66 1539 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms