RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
CHMP2A-205ENST00000600006 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
CHMP2A-205ENST00000600006 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
CHMP2A-205ENST00000600006 VPS8Q8N3P4 1428 aa12.81□□□□□ -0.36
CHMP2A-205ENST00000600006 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
CHMP2A-205ENST00000600006 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-205ENST00000600006 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
CHMP2A-205ENST00000600006 ABCC1P33527 1531 aa12.8□□□□□ -0.36
CHMP2A-205ENST00000600006 KDM5CP41229 1560 aa12.8□□□□□ -0.36
CHMP2A-205ENST00000600006 SCAPERQ9BY12 1400 aa12.79□□□□□ -0.36
CHMP2A-205ENST00000600006 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
CHMP2A-205ENST00000600006 ZFYVE16Q7Z3T8 1539 aa12.79□□□□□ -0.36
CHMP2A-205ENST00000600006 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
CHMP2A-205ENST00000600006 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
CHMP2A-205ENST00000600006 MTUS2Q5JR59 1369 aa12.77□□□□□ -0.37
CHMP2A-205ENST00000600006 ZNF518AQ6AHZ1 1483 aa12.77□□□□□ -0.37
CHMP2A-205ENST00000600006 GPATCH8Q9UKJ3 1502 aaKnown RBP12.77□□□□□ -0.37
CHMP2A-205ENST00000600006 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
CHMP2A-205ENST00000600006 HECW2Q9P2P5 1572 aa12.76□□□□□ -0.37
CHMP2A-205ENST00000600006 ADAMTSL3P82987 1691 aa12.76□□□□□ -0.37
CHMP2A-205ENST00000600006 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
CHMP2A-205ENST00000600006 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
CHMP2A-205ENST00000600006 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
CHMP2A-205ENST00000600006 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
CHMP2A-205ENST00000600006 MAP3K1Q13233 1512 aa12.74□□□□□ -0.37
CHMP2A-205ENST00000600006 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
CHMP2A-205ENST00000600006 ABCA6Q8N139 1617 aa12.72□□□□□ -0.37
CHMP2A-205ENST00000600006 DIP2CQ9Y2E4 1556 aa12.72□□□□□ -0.37
CHMP2A-205ENST00000600006 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
CHMP2A-205ENST00000600006 CCNB3Q8WWL7 1395 aa12.71□□□□□ -0.37
CHMP2A-205ENST00000600006 MADDQ8WXG6 1647 aa12.71□□□□□ -0.37
CHMP2A-205ENST00000600006 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
CHMP2A-205ENST00000600006 NCOA2Q15596 1464 aa12.71□□□□□ -0.38
CHMP2A-205ENST00000600006 LRRC9Q6ZRR7 1453 aa12.71□□□□□ -0.38
CHMP2A-205ENST00000600006 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.38
CHMP2A-205ENST00000600006 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.38
CHMP2A-205ENST00000600006 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.38
CHMP2A-205ENST00000600006 KIDINS220Q9ULH0 1771 aa12.7□□□□□ -0.38
CHMP2A-205ENST00000600006 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
CHMP2A-205ENST00000600006 ATP10AO60312 1499 aa12.69□□□□□ -0.38
CHMP2A-205ENST00000600006 KIAA1107Q9UPP5 1409 aa12.69□□□□□ -0.38
CHMP2A-205ENST00000600006 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
CHMP2A-205ENST00000600006 AFAP1Q8N556 730 aa12.67□□□□□ -0.38
CHMP2A-205ENST00000600006 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
CHMP2A-205ENST00000600006 FER1L4A9Z1Z3 1794 aa12.66□□□□□ -0.38
CHMP2A-205ENST00000600006 CFDP1Q9UEE9 299 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-205ENST00000600006 ATP7AQ04656 1500 aa12.65□□□□□ -0.38
CHMP2A-205ENST00000600006 PTPRMP28827 1452 aa12.65□□□□□ -0.38
CHMP2A-205ENST00000600006 AGLP35573 1532 aa12.64□□□□□ -0.39
CHMP2A-205ENST00000600006 ZNF777Q9ULD5 760 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-205ENST00000600006 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
CHMP2A-205ENST00000600006 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-205ENST00000600006 MBD5Q9P267 1494 aa12.63□□□□□ -0.39
CHMP2A-205ENST00000600006 PLXNC1O60486 1568 aa12.62□□□□□ -0.39
CHMP2A-205ENST00000600006 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
CHMP2A-205ENST00000600006 ARHGEF5Q12774 1597 aa12.61□□□□□ -0.39
CHMP2A-205ENST00000600006 HNRNPMP52272 730 aaKnown RBP eCLIP12.6□□□□□ -0.39
CHMP2A-205ENST00000600006 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-205ENST00000600006 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
CHMP2A-205ENST00000600006 CCDC141Q6ZP82 1450 aa12.59□□□□□ -0.39
CHMP2A-205ENST00000600006 MYOM3Q5VTT5 1437 aa12.59□□□□□ -0.39
CHMP2A-205ENST00000600006 SPAG9O60271 1321 aaKnown RBP12.59□□□□□ -0.39
CHMP2A-205ENST00000600006 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
CHMP2A-205ENST00000600006 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
CHMP2A-205ENST00000600006 MIA2Q96PC5 1412 aa12.57□□□□□ -0.4
CHMP2A-205ENST00000600006 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
CHMP2A-205ENST00000600006 A2MP01023 1474 aa12.56□□□□□ -0.4
CHMP2A-205ENST00000600006 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 CROCC2H7BZ55 1655 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 APLP2Q06481 763 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 MLECQ14165 292 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 C3P01024 1663 aa12.54□□□□□ -0.4
CHMP2A-205ENST00000600006 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.41
CHMP2A-205ENST00000600006 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.41
CHMP2A-205ENST00000600006 LMTK3Q96Q04 1460 aa12.52□□□□□ -0.41
CHMP2A-205ENST00000600006 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
CHMP2A-205ENST00000600006 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
CHMP2A-205ENST00000600006 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
CHMP2A-205ENST00000600006 DNMT1P26358 1616 aaKnown RBP12.5□□□□□ -0.41
CHMP2A-205ENST00000600006 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
CHMP2A-205ENST00000600006 SHANK2Q9UPX8 1470 aa12.49□□□□□ -0.41
CHMP2A-205ENST00000600006 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
CHMP2A-205ENST00000600006 FAM135AQ9P2D6 1515 aa12.47□□□□□ -0.41
CHMP2A-205ENST00000600006 DHX29Q7Z478 1369 aaKnown RBP12.47□□□□□ -0.41
CHMP2A-205ENST00000600006 RNF17Q9BXT8 1623 aaKnown RBP12.46□□□□□ -0.41
CHMP2A-205ENST00000600006 ABCC5O15440 1437 aa12.45□□□□□ -0.42
CHMP2A-205ENST00000600006 DAPK1P53355 1430 aa12.45□□□□□ -0.42
CHMP2A-205ENST00000600006 SETD1BQ9UPS6 1966 aaKnown RBP12.44□□□□□ -0.42
CHMP2A-205ENST00000600006 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
CHMP2A-205ENST00000600006 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
CHMP2A-205ENST00000600006 KDM5DQ9BY66 1539 aa12.43□□□□□ -0.42
CHMP2A-205ENST00000600006 ZC3H13Q5T200 1668 aaKnown RBP12.43□□□□□ -0.42
CHMP2A-205ENST00000600006 CEBPAP49715 358 aaPredicted RBP12.43□□□□□ -0.42
CHMP2A-205ENST00000600006 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
CHMP2A-205ENST00000600006 MROH1Q8NDA8 1641 aa12.43□□□□□ -0.42
CHMP2A-205ENST00000600006 DUOX2Q9NRD8 1548 aa12.42□□□□□ -0.42
CHMP2A-205ENST00000600006 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
CHMP2A-205ENST00000600006 NPATQ14207 1427 aa12.42□□□□□ -0.42
CHMP2A-205ENST00000600006 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms