RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
LSP1P1-201ENST00000599825 ILDR1Q86SU0 546 aaPredicted RBP16.64■□□□□ 0.25
LSP1P1-201ENST00000599825 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
LSP1P1-201ENST00000599825 MYT1LQ9UL68 1186 aa16.62■□□□□ 0.25
LSP1P1-201ENST00000599825 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
LSP1P1-201ENST00000599825 PLCH2O75038 1416 aa16.62■□□□□ 0.25
LSP1P1-201ENST00000599825 SIGLEC1Q9BZZ2 1709 aa16.61■□□□□ 0.25
LSP1P1-201ENST00000599825 CLIP1P30622 1438 aa16.61■□□□□ 0.25
LSP1P1-201ENST00000599825 TROQ12816 1431 aaPredicted RBP16.6■□□□□ 0.25
LSP1P1-201ENST00000599825 POGZQ7Z3K3 1410 aa16.6■□□□□ 0.25
LSP1P1-201ENST00000599825 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
LSP1P1-201ENST00000599825 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
LSP1P1-201ENST00000599825 FER1L4A9Z1Z3 1794 aa16.53■□□□□ 0.24
LSP1P1-201ENST00000599825 CASKIN1Q8WXD9 1431 aa16.53■□□□□ 0.24
LSP1P1-201ENST00000599825 HSPA2P54652 639 aa16.52■□□□□ 0.24
LSP1P1-201ENST00000599825 AFAP1Q8N556 730 aa16.52■□□□□ 0.24
LSP1P1-201ENST00000599825 CCDC18Q5T9S5 1454 aa16.52■□□□□ 0.23
LSP1P1-201ENST00000599825 MAGI2Q86UL8 1455 aa16.51■□□□□ 0.23
LSP1P1-201ENST00000599825 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
LSP1P1-201ENST00000599825 CDC42BPBQ9Y5S2 1711 aa16.5■□□□□ 0.23
LSP1P1-201ENST00000599825 ZNF518AQ6AHZ1 1483 aa16.5■□□□□ 0.23
LSP1P1-201ENST00000599825 LMTK3Q96Q04 1460 aa16.5■□□□□ 0.23
LSP1P1-201ENST00000599825 PREX2Q70Z35 1606 aa16.5■□□□□ 0.23
LSP1P1-201ENST00000599825 ZNF777Q9ULD5 760 aaPredicted RBP16.5■□□□□ 0.23
LSP1P1-201ENST00000599825 ATP10AO60312 1499 aa16.49■□□□□ 0.23
LSP1P1-201ENST00000599825 FYCO1Q9BQS8 1478 aa16.48■□□□□ 0.23
LSP1P1-201ENST00000599825 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
LSP1P1-201ENST00000599825 ITSN2Q9NZM3 1697 aa16.46■□□□□ 0.23
LSP1P1-201ENST00000599825 ABCC1P33527 1531 aa16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 ABCA6Q8N139 1617 aa16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 CDC42BPAQ5VT25 1732 aa16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 KDM5CP41229 1560 aa16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 TRAPPC8Q9Y2L5 1435 aa16.45■□□□□ 0.22
LSP1P1-201ENST00000599825 ARHGEF12Q9NZN5 1544 aa16.44■□□□□ 0.22
LSP1P1-201ENST00000599825 SYCP2Q9BX26 1530 aa16.4■□□□□ 0.22
LSP1P1-201ENST00000599825 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
LSP1P1-201ENST00000599825 MTUS2Q5JR59 1369 aa16.38■□□□□ 0.21
LSP1P1-201ENST00000599825 HNRNPMP52272 730 aaKnown RBP eCLIP16.37■□□□□ 0.21
LSP1P1-201ENST00000599825 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
LSP1P1-201ENST00000599825 CCNB3Q8WWL7 1395 aa16.36■□□□□ 0.21
LSP1P1-201ENST00000599825 KIDINS220Q9ULH0 1771 aa16.36■□□□□ 0.21
LSP1P1-201ENST00000599825 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
LSP1P1-201ENST00000599825 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
LSP1P1-201ENST00000599825 GPATCH8Q9UKJ3 1502 aaKnown RBP16.35■□□□□ 0.21
LSP1P1-201ENST00000599825 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
LSP1P1-201ENST00000599825 CFDP1Q9UEE9 299 aaPredicted RBP16.34■□□□□ 0.21
LSP1P1-201ENST00000599825 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.2
LSP1P1-201ENST00000599825 SUPT6HQ7KZ85 1726 aaKnown RBP16.32■□□□□ 0.2
LSP1P1-201ENST00000599825 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
LSP1P1-201ENST00000599825 REREQ9P2R6 1566 aa16.32■□□□□ 0.2
LSP1P1-201ENST00000599825 C3P01024 1663 aa16.31■□□□□ 0.2
LSP1P1-201ENST00000599825 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
LSP1P1-201ENST00000599825 TIAM1Q13009 1591 aa16.3■□□□□ 0.2
LSP1P1-201ENST00000599825 ATP7AQ04656 1500 aa16.29■□□□□ 0.2
LSP1P1-201ENST00000599825 EHBP1L1Q8N3D4 1523 aa16.29■□□□□ 0.2
LSP1P1-201ENST00000599825 ZNF644Q9H582 1327 aaPredicted RBP16.29■□□□□ 0.2
LSP1P1-201ENST00000599825 AGLP35573 1532 aa16.27■□□□□ 0.2
LSP1P1-201ENST00000599825 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
LSP1P1-201ENST00000599825 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
LSP1P1-201ENST00000599825 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
LSP1P1-201ENST00000599825 CLTCQ00610 1675 aaKnown RBP16.24■□□□□ 0.19
LSP1P1-201ENST00000599825 A2MP01023 1474 aa16.23■□□□□ 0.19
LSP1P1-201ENST00000599825 GGT6Q6P531 493 aa16.23■□□□□ 0.19
LSP1P1-201ENST00000599825 KIAA1107Q9UPP5 1409 aa16.21■□□□□ 0.19
LSP1P1-201ENST00000599825 STRCQ7RTU9 1775 aa16.21■□□□□ 0.19
LSP1P1-201ENST00000599825 CERKQ8TCT0 537 aa16.21■□□□□ 0.19
LSP1P1-201ENST00000599825 CNTLNQ9NXG0 1405 aa16.2■□□□□ 0.18
LSP1P1-201ENST00000599825 NCOA2Q15596 1464 aa16.2■□□□□ 0.18
LSP1P1-201ENST00000599825 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
LSP1P1-201ENST00000599825 CAMSAP2Q08AD1 1489 aa16.18■□□□□ 0.18
LSP1P1-201ENST00000599825 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
LSP1P1-201ENST00000599825 MROH2AA6NES4 1674 aa16.17■□□□□ 0.18
LSP1P1-201ENST00000599825 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
LSP1P1-201ENST00000599825 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
LSP1P1-201ENST00000599825 CCDC141Q6ZP82 1450 aa16.15■□□□□ 0.18
LSP1P1-201ENST00000599825 VPS8Q8N3P4 1428 aa16.14■□□□□ 0.17
LSP1P1-201ENST00000599825 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
LSP1P1-201ENST00000599825 CAMSAP1Q5T5Y3 1602 aa16.14■□□□□ 0.17
LSP1P1-201ENST00000599825 MYO3AQ8NEV4 1616 aa16.14■□□□□ 0.17
LSP1P1-201ENST00000599825 SETD1BQ9UPS6 1966 aaKnown RBP16.13■□□□□ 0.17
LSP1P1-201ENST00000599825 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
LSP1P1-201ENST00000599825 KIF3BO15066 747 aa16.11■□□□□ 0.17
LSP1P1-201ENST00000599825 NPATQ14207 1427 aa16.11■□□□□ 0.17
LSP1P1-201ENST00000599825 NCOA1Q15788 1441 aa16.11■□□□□ 0.17
LSP1P1-201ENST00000599825 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
LSP1P1-201ENST00000599825 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
LSP1P1-201ENST00000599825 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
LSP1P1-201ENST00000599825 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
LSP1P1-201ENST00000599825 DHX29Q7Z478 1369 aaKnown RBP16.08■□□□□ 0.16
LSP1P1-201ENST00000599825 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.16
LSP1P1-201ENST00000599825 PTPRTO14522 1441 aa16.07■□□□□ 0.16
LSP1P1-201ENST00000599825 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
LSP1P1-201ENST00000599825 TSPY4P0CV99 314 aa16.05■□□□□ 0.16
LSP1P1-201ENST00000599825 TSPY10P0CW01 314 aa16.05■□□□□ 0.16
LSP1P1-201ENST00000599825 FBXO31Q5XUX0 539 aaPredicted RBP16.05■□□□□ 0.16
LSP1P1-201ENST00000599825 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
LSP1P1-201ENST00000599825 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
LSP1P1-201ENST00000599825 WASHC2CQ9Y4E1 1318 aa16.03■□□□□ 0.16
LSP1P1-201ENST00000599825 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms