RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 ZNF710Q8N1W2 664 aa16.5■□□□□ 0.23
LINC00343-208ENST00000599264 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
LINC00343-208ENST00000599264 TMC2Q8TDI7 906 aa16.48■□□□□ 0.23
LINC00343-208ENST00000599264 HOXB3P14651 431 aaPredicted RBP16.44■□□□□ 0.22
LINC00343-208ENST00000599264 GTPBP6O43824 516 aaPredicted RBP16.43■□□□□ 0.22
LINC00343-208ENST00000599264 C2orf72A6NCS6 295 aa16.42■□□□□ 0.22
LINC00343-208ENST00000599264 BBXQ8WY36 941 aaPredicted RBP16.42■□□□□ 0.22
LINC00343-208ENST00000599264 KIF3CO14782 793 aa16.41■□□□□ 0.22
LINC00343-208ENST00000599264 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
LINC00343-208ENST00000599264 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
LINC00343-208ENST00000599264 EMP3P54852 163 aa16.36■□□□□ 0.21
LINC00343-208ENST00000599264 MARVELD3Q96A59 401 aa16.36■□□□□ 0.21
LINC00343-208ENST00000599264 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
LINC00343-208ENST00000599264 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
LINC00343-208ENST00000599264 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
LINC00343-208ENST00000599264 FOXK1P85037 733 aa16.25■□□□□ 0.19
LINC00343-208ENST00000599264 PDE4AP27815 886 aa16.24■□□□□ 0.19
LINC00343-208ENST00000599264 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
LINC00343-208ENST00000599264 SPRYD3Q8NCJ5 442 aa16.24■□□□□ 0.19
LINC00343-208ENST00000599264 FAM205CA6NFA0 338 aa16.23■□□□□ 0.19
LINC00343-208ENST00000599264 SLC34A2O95436 690 aa16.23■□□□□ 0.19
LINC00343-208ENST00000599264 GPR153Q6NV75 609 aa16.23■□□□□ 0.19
LINC00343-208ENST00000599264 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
LINC00343-208ENST00000599264 ARSIQ5FYB1 569 aa16.2■□□□□ 0.18
LINC00343-208ENST00000599264 CRISPLD2Q9H0B8 497 aa16.2■□□□□ 0.18
LINC00343-208ENST00000599264 ERBB3P21860 1342 aa16.19■□□□□ 0.18
LINC00343-208ENST00000599264 DSG2Q14126 1118 aa16.18■□□□□ 0.18
LINC00343-208ENST00000599264 HS3ST6Q96QI5 342 aa16.18■□□□□ 0.18
LINC00343-208ENST00000599264 PCDHGA4Q9Y5G9 962 aa16.14■□□□□ 0.17
LINC00343-208ENST00000599264 PPP1R15BQ5SWA1 713 aa16.12■□□□□ 0.17
LINC00343-208ENST00000599264 NCKAP5LQ9HCH0 1330 aa16.12■□□□□ 0.17
LINC00343-208ENST00000599264 TBC1D12O60347 775 aa16.11■□□□□ 0.17
LINC00343-208ENST00000599264 PAXIP1Q6ZW49 1069 aaPredicted RBP16.11■□□□□ 0.17
LINC00343-208ENST00000599264 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
LINC00343-208ENST00000599264 LARP6Q9BRS8 491 aaKnown RBP16.11■□□□□ 0.17
LINC00343-208ENST00000599264 PTCD2Q8WV60 388 aaKnown RBP16.1■□□□□ 0.17
LINC00343-208ENST00000599264 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
LINC00343-208ENST00000599264 VARS2Q5ST30 1063 aaKnown RBP16.08■□□□□ 0.16
LINC00343-208ENST00000599264 KHSRPQ92945 711 aaKnown RBP eCLIP16.08■□□□□ 0.16
LINC00343-208ENST00000599264 NUDT7P0C024 238 aa16.07■□□□□ 0.16
LINC00343-208ENST00000599264 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
LINC00343-208ENST00000599264 POTEB3A0JP26 581 aa16.05■□□□□ 0.16
LINC00343-208ENST00000599264 POTEBQ6S5H4 581 aa16.05■□□□□ 0.16
LINC00343-208ENST00000599264 PLSCR2Q9NRY7 297 aa16.04■□□□□ 0.16
LINC00343-208ENST00000599264 CADPS2Q86UW7 1296 aa16.03■□□□□ 0.16
LINC00343-208ENST00000599264 MFSD10Q14728 455 aa16.02■□□□□ 0.16
LINC00343-208ENST00000599264 ZNF687Q8N1G0 1237 aa15.98■□□□□ 0.15
LINC00343-208ENST00000599264 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
LINC00343-208ENST00000599264 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
LINC00343-208ENST00000599264 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.15
LINC00343-208ENST00000599264 LHX6Q9UPM6 363 aa15.96■□□□□ 0.15
LINC00343-208ENST00000599264 KRTAP3-3Q9BYR6 98 aa15.9■□□□□ 0.14
LINC00343-208ENST00000599264 KRTAP3-2Q9BYR7 98 aa15.9■□□□□ 0.14
LINC00343-208ENST00000599264 KDM4FA0A1W2PPD8 638 aa15.89■□□□□ 0.13
LINC00343-208ENST00000599264 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
LINC00343-208ENST00000599264 PBX2P40425 430 aa15.84■□□□□ 0.13
LINC00343-208ENST00000599264 WDR70Q9NW82 654 aa15.84■□□□□ 0.13
LINC00343-208ENST00000599264 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.12
LINC00343-208ENST00000599264 SPNS2Q8IVW8 549 aa15.81■□□□□ 0.12
LINC00343-208ENST00000599264 EMILIN3Q9NT22 766 aa15.81■□□□□ 0.12
LINC00343-208ENST00000599264 EVI5O60447 810 aa15.8■□□□□ 0.12
LINC00343-208ENST00000599264 CAMK2BQ13554 666 aa15.8■□□□□ 0.12
LINC00343-208ENST00000599264 ANO8Q9HCE9 1232 aaPredicted RBP15.77■□□□□ 0.12
LINC00343-208ENST00000599264 ZNF454Q8N9F8 522 aa15.74■□□□□ 0.11
LINC00343-208ENST00000599264 KCNH8Q96L42 1107 aa15.74■□□□□ 0.11
LINC00343-208ENST00000599264 ARHGAP33O14559 1287 aa15.73■□□□□ 0.11
LINC00343-208ENST00000599264 E2F4Q16254 413 aa15.72■□□□□ 0.11
LINC00343-208ENST00000599264 ANKRD13DQ6ZTN6 518 aa15.72■□□□□ 0.11
LINC00343-208ENST00000599264 LSM11P83369 360 aaKnown RBP eCLIP15.71■□□□□ 0.11
LINC00343-208ENST00000599264 MMRN1Q13201 1228 aa15.7■□□□□ 0.1
LINC00343-208ENST00000599264 TSHZ2Q9NRE2 1034 aa15.7■□□□□ 0.1
LINC00343-208ENST00000599264 DPYSL4O14531 572 aa15.69■□□□□ 0.1
LINC00343-208ENST00000599264 FOSBP53539 338 aa15.69■□□□□ 0.1
LINC00343-208ENST00000599264 JPH4Q96JJ6 628 aa15.69■□□□□ 0.1
LINC00343-208ENST00000599264 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
LINC00343-208ENST00000599264 PTGER2P43116 358 aa15.67■□□□□ 0.1
LINC00343-208ENST00000599264 PLCB2Q00722 1185 aa15.67■□□□□ 0.1
LINC00343-208ENST00000599264 POTEEQ6S8J3 1075 aa15.65■□□□□ 0.1
LINC00343-208ENST00000599264 ZDHHC16Q969W1 377 aa15.63■□□□□ 0.09
LINC00343-208ENST00000599264 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
LINC00343-208ENST00000599264 KCNK17Q96T54 332 aa15.61■□□□□ 0.09
LINC00343-208ENST00000599264 SPDYE16A6NNV3 312 aaPredicted RBP15.6■□□□□ 0.09
LINC00343-208ENST00000599264 PHF14O94880 888 aa15.59■□□□□ 0.09
LINC00343-208ENST00000599264 PTPREP23469 700 aa15.59■□□□□ 0.09
LINC00343-208ENST00000599264 PSEN2P49810 448 aa15.59■□□□□ 0.09
LINC00343-208ENST00000599264 FBXW7Q969H0 707 aa15.58■□□□□ 0.08
LINC00343-208ENST00000599264 ARIH1Q9Y4X5 557 aaPredicted RBP15.58■□□□□ 0.08
LINC00343-208ENST00000599264 TK2O00142 265 aa15.57■□□□□ 0.08
LINC00343-208ENST00000599264 MYT1LQ9UL68 1186 aa15.57■□□□□ 0.08
LINC00343-208ENST00000599264 PDIA6Q15084 440 aa15.56■□□□□ 0.08
LINC00343-208ENST00000599264 TYW1BQ6NUM6 668 aa15.56■□□□□ 0.08
LINC00343-208ENST00000599264 PCDHGA10Q9Y5H3 936 aa15.56■□□□□ 0.08
LINC00343-208ENST00000599264 ADGRD1Q6QNK2 874 aa15.55■□□□□ 0.08
LINC00343-208ENST00000599264 EPAS1Q99814 870 aa15.55■□□□□ 0.08
LINC00343-208ENST00000599264 DMRTA1Q5VZB9 504 aa15.53■□□□□ 0.08
LINC00343-208ENST00000599264 ADAM33Q9BZ11 813 aa15.53■□□□□ 0.08
LINC00343-208ENST00000599264 RNF166Q96A37 237 aaPredicted RBP15.52■□□□□ 0.08
LINC00343-208ENST00000599264 STAC3Q96MF2 364 aa15.5■□□□□ 0.07
LINC00343-208ENST00000599264 DDX12PQ92771 950 aa15.49■□□□□ 0.07
LINC00343-208ENST00000599264 SLC4A5Q9BY07 1137 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms