RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 CDC42BPBQ9Y5S2 1711 aa14.37□□□□□ -0.11
ARHGEF1-215ENST00000598444 ZMYM4Q5VZL5 1548 aa14.36□□□□□ -0.11
ARHGEF1-215ENST00000598444 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
ARHGEF1-215ENST00000598444 ARHGAP5Q13017 1502 aa14.35□□□□□ -0.11
ARHGEF1-215ENST00000598444 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
ARHGEF1-215ENST00000598444 MADDQ8WXG6 1647 aa14.34□□□□□ -0.11
ARHGEF1-215ENST00000598444 PTPRMP28827 1452 aa14.34□□□□□ -0.11
ARHGEF1-215ENST00000598444 MAGI2Q86UL8 1455 aa14.34□□□□□ -0.11
ARHGEF1-215ENST00000598444 YEATS2Q9ULM3 1422 aa14.33□□□□□ -0.11
ARHGEF1-215ENST00000598444 RIMS1Q86UR5 1692 aaKnown RBP14.33□□□□□ -0.12
ARHGEF1-215ENST00000598444 POGZQ7Z3K3 1410 aa14.32□□□□□ -0.12
ARHGEF1-215ENST00000598444 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
ARHGEF1-215ENST00000598444 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
ARHGEF1-215ENST00000598444 CDC42BPAQ5VT25 1732 aa14.31□□□□□ -0.12
ARHGEF1-215ENST00000598444 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
ARHGEF1-215ENST00000598444 MYT1LQ9UL68 1186 aa14.3□□□□□ -0.12
ARHGEF1-215ENST00000598444 PREX2Q70Z35 1606 aa14.3□□□□□ -0.12
ARHGEF1-215ENST00000598444 MLECQ14165 292 aa14.29□□□□□ -0.12
ARHGEF1-215ENST00000598444 ATP10AO60312 1499 aa14.28□□□□□ -0.12
ARHGEF1-215ENST00000598444 ZNF518AQ6AHZ1 1483 aa14.28□□□□□ -0.12
ARHGEF1-215ENST00000598444 FER1L4A9Z1Z3 1794 aa14.27□□□□□ -0.12
ARHGEF1-215ENST00000598444 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
ARHGEF1-215ENST00000598444 ITSN2Q9NZM3 1697 aa14.25□□□□□ -0.13
ARHGEF1-215ENST00000598444 KDM5CP41229 1560 aa14.25□□□□□ -0.13
ARHGEF1-215ENST00000598444 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
ARHGEF1-215ENST00000598444 ZNF777Q9ULD5 760 aaPredicted RBP14.24□□□□□ -0.13
ARHGEF1-215ENST00000598444 ABCC1P33527 1531 aa14.22□□□□□ -0.13
ARHGEF1-215ENST00000598444 ARHGEF12Q9NZN5 1544 aa14.22□□□□□ -0.13
ARHGEF1-215ENST00000598444 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
ARHGEF1-215ENST00000598444 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
ARHGEF1-215ENST00000598444 DIP2CQ9Y2E4 1556 aa14.21□□□□□ -0.14
ARHGEF1-215ENST00000598444 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.14
ARHGEF1-215ENST00000598444 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
ARHGEF1-215ENST00000598444 SETD1BQ9UPS6 1966 aaKnown RBP14.2□□□□□ -0.14
ARHGEF1-215ENST00000598444 MLH3Q9UHC1 1453 aa14.2□□□□□ -0.14
ARHGEF1-215ENST00000598444 KIDINS220Q9ULH0 1771 aa14.2□□□□□ -0.14
ARHGEF1-215ENST00000598444 ABCA6Q8N139 1617 aa14.19□□□□□ -0.14
ARHGEF1-215ENST00000598444 SAMD9LQ8IVG5 1584 aa14.19□□□□□ -0.14
ARHGEF1-215ENST00000598444 LOC105371045A0A1W2PR82 267 aa14.19□□□□□ -0.14
ARHGEF1-215ENST00000598444 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF1-215ENST00000598444 HNRNPMP52272 730 aaKnown RBP eCLIP14.18□□□□□ -0.14
ARHGEF1-215ENST00000598444 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
ARHGEF1-215ENST00000598444 CCNB3Q8WWL7 1395 aa14.18□□□□□ -0.14
ARHGEF1-215ENST00000598444 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
ARHGEF1-215ENST00000598444 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
ARHGEF1-215ENST00000598444 CEBPAP49715 358 aaPredicted RBP14.16□□□□□ -0.14
ARHGEF1-215ENST00000598444 SYCP2Q9BX26 1530 aa14.15□□□□□ -0.14
ARHGEF1-215ENST00000598444 HSPA2P54652 639 aa14.15□□□□□ -0.14
ARHGEF1-215ENST00000598444 SPAG9O60271 1321 aaKnown RBP14.15□□□□□ -0.15
ARHGEF1-215ENST00000598444 SUPT6HQ7KZ85 1726 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-215ENST00000598444 ESF1Q9H501 851 aaKnown RBP14.13□□□□□ -0.15
ARHGEF1-215ENST00000598444 EHBP1L1Q8N3D4 1523 aa14.13□□□□□ -0.15
ARHGEF1-215ENST00000598444 PLEKHH2Q8IVE3 1493 aa14.12□□□□□ -0.15
ARHGEF1-215ENST00000598444 AGLP35573 1532 aa14.12□□□□□ -0.15
ARHGEF1-215ENST00000598444 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
ARHGEF1-215ENST00000598444 KIAA1107Q9UPP5 1409 aa14.12□□□□□ -0.15
ARHGEF1-215ENST00000598444 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
ARHGEF1-215ENST00000598444 C3P01024 1663 aa14.11□□□□□ -0.15
ARHGEF1-215ENST00000598444 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF1-215ENST00000598444 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
ARHGEF1-215ENST00000598444 INO80Q9ULG1 1556 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF1-215ENST00000598444 ADGBQ8N7X0 1667 aa14.06□□□□□ -0.16
ARHGEF1-215ENST00000598444 VPS8Q8N3P4 1428 aa14.06□□□□□ -0.16
ARHGEF1-215ENST00000598444 NCOA2Q15596 1464 aa14.06□□□□□ -0.16
ARHGEF1-215ENST00000598444 A2MP01023 1474 aa14.05□□□□□ -0.16
ARHGEF1-215ENST00000598444 CNTLNQ9NXG0 1405 aa14.04□□□□□ -0.16
ARHGEF1-215ENST00000598444 MBD5Q9P267 1494 aa14.04□□□□□ -0.16
ARHGEF1-215ENST00000598444 MROH2AA6NES4 1674 aa14.04□□□□□ -0.16
ARHGEF1-215ENST00000598444 UHRF1BP1Q6BDS2 1440 aa14.03□□□□□ -0.16
ARHGEF1-215ENST00000598444 CLTCQ00610 1675 aaKnown RBP14.03□□□□□ -0.16
ARHGEF1-215ENST00000598444 STRCQ7RTU9 1775 aa14.03□□□□□ -0.16
ARHGEF1-215ENST00000598444 PLXNC1O60486 1568 aa14.02□□□□□ -0.16
ARHGEF1-215ENST00000598444 GGT6Q6P531 493 aa14.02□□□□□ -0.17
ARHGEF1-215ENST00000598444 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
ARHGEF1-215ENST00000598444 FBXO41Q8TF61 875 aa14.01□□□□□ -0.17
ARHGEF1-215ENST00000598444 CAMSAP2Q08AD1 1489 aa14□□□□□ -0.17
ARHGEF1-215ENST00000598444 RTEL1-TNFRSF6BF6WH68 1400 aa14□□□□□ -0.17
ARHGEF1-215ENST00000598444 ZMYM3Q14202 1370 aa14□□□□□ -0.17
ARHGEF1-215ENST00000598444 KANK4Q5T7N3 995 aaPredicted RBP14□□□□□ -0.17
ARHGEF1-215ENST00000598444 RSPH4AQ5TD94 716 aa14□□□□□ -0.17
ARHGEF1-215ENST00000598444 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
ARHGEF1-215ENST00000598444 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
ARHGEF1-215ENST00000598444 CCDC141Q6ZP82 1450 aa13.98□□□□□ -0.17
ARHGEF1-215ENST00000598444 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
ARHGEF1-215ENST00000598444 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
ARHGEF1-215ENST00000598444 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
ARHGEF1-215ENST00000598444 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
ARHGEF1-215ENST00000598444 APLP2Q06481 763 aa13.96□□□□□ -0.17
ARHGEF1-215ENST00000598444 ARHGEF5Q12774 1597 aa13.96□□□□□ -0.18
ARHGEF1-215ENST00000598444 KIF3BO15066 747 aa13.95□□□□□ -0.18
ARHGEF1-215ENST00000598444 NPATQ14207 1427 aa13.95□□□□□ -0.18
ARHGEF1-215ENST00000598444 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
ARHGEF1-215ENST00000598444 CFAP65Q6ZU64 1925 aaKnown RBP13.92□□□□□ -0.18
ARHGEF1-215ENST00000598444 PTPRKQ15262 1439 aa13.91□□□□□ -0.18
ARHGEF1-215ENST00000598444 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
ARHGEF1-215ENST00000598444 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
ARHGEF1-215ENST00000598444 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.19
ARHGEF1-215ENST00000598444 PTPRTO14522 1441 aa13.9□□□□□ -0.19
ARHGEF1-215ENST00000598444 MIA2Q96PC5 1412 aa13.9□□□□□ -0.19
ARHGEF1-215ENST00000598444 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms