RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 ZFYVE16Q7Z3T8 1539 aa32.11■■■□□ 2.73
COPE-207ENST00000597646 POGZQ7Z3K3 1410 aa32.11■■■□□ 2.73
COPE-207ENST00000597646 ZMYM4Q5VZL5 1548 aa32.1■■■□□ 2.73
COPE-207ENST00000597646 YEATS2Q9ULM3 1422 aa32.09■■■□□ 2.73
COPE-207ENST00000597646 MYT1LQ9UL68 1186 aa32.09■■■□□ 2.73
COPE-207ENST00000597646 BCORL1Q5H9F3 1711 aa32.09■■■□□ 2.73
COPE-207ENST00000597646 ADAMTSL3P82987 1691 aa32.08■■■□□ 2.73
COPE-207ENST00000597646 MAGI2Q86UL8 1455 aa32.07■■■□□ 2.72
COPE-207ENST00000597646 HECW2Q9P2P5 1572 aa32.06■■■□□ 2.72
COPE-207ENST00000597646 PTPRMP28827 1452 aa32.03■■■□□ 2.72
COPE-207ENST00000597646 CDC42BPBQ9Y5S2 1711 aa32.03■■■□□ 2.72
COPE-207ENST00000597646 MADDQ8WXG6 1647 aa32.01■■■□□ 2.72
COPE-207ENST00000597646 MLECQ14165 292 aa32.01■■■□□ 2.71
COPE-207ENST00000597646 AFAP1Q8N556 730 aa32.01■■■□□ 2.71
COPE-207ENST00000597646 ZNF518AQ6AHZ1 1483 aa31.98■■■□□ 2.71
COPE-207ENST00000597646 PREX2Q70Z35 1606 aa31.98■■■□□ 2.71
COPE-207ENST00000597646 PLPPR3Q6T4P5 718 aa31.98■■■□□ 2.71
COPE-207ENST00000597646 CEP162Q5TB80 1403 aa31.98■■■□□ 2.71
COPE-207ENST00000597646 ZNF777Q9ULD5 760 aaPredicted RBP31.97■■■□□ 2.71
COPE-207ENST00000597646 ATP10AO60312 1499 aa31.94■■■□□ 2.7
COPE-207ENST00000597646 RIMS1Q86UR5 1692 aaKnown RBP31.94■■■□□ 2.7
COPE-207ENST00000597646 CDC42BPAQ5VT25 1732 aa31.92■■■□□ 2.7
COPE-207ENST00000597646 SIGLEC1Q9BZZ2 1709 aa31.92■■■□□ 2.7
COPE-207ENST00000597646 LOC105371045A0A1W2PR82 267 aa31.92■■■□□ 2.7
COPE-207ENST00000597646 MTUS2Q5JR59 1369 aa31.92■■■□□ 2.7
COPE-207ENST00000597646 C9orf84Q5VXU9 1444 aa31.9■■■□□ 2.7
COPE-207ENST00000597646 KDM5CP41229 1560 aa31.87■■■□□ 2.69
COPE-207ENST00000597646 ABCC1P33527 1531 aa31.86■■■□□ 2.69
COPE-207ENST00000597646 TRAPPC8Q9Y2L5 1435 aa31.85■■■□□ 2.69
COPE-207ENST00000597646 ARHGEF12Q9NZN5 1544 aa31.85■■■□□ 2.69
COPE-207ENST00000597646 CCNB3Q8WWL7 1395 aa31.84■■■□□ 2.69
COPE-207ENST00000597646 ITSN2Q9NZM3 1697 aa31.84■■■□□ 2.69
COPE-207ENST00000597646 CFDP1Q9UEE9 299 aaPredicted RBP31.83■■■□□ 2.69
COPE-207ENST00000597646 GPATCH8Q9UKJ3 1502 aaKnown RBP31.83■■■□□ 2.69
COPE-207ENST00000597646 FER1L4A9Z1Z3 1794 aa31.8■■■□□ 2.68
COPE-207ENST00000597646 HNRNPMP52272 730 aaKnown RBP eCLIP31.78■■■□□ 2.68
COPE-207ENST00000597646 MLH3Q9UHC1 1453 aa31.78■■■□□ 2.68
COPE-207ENST00000597646 SAMD9LQ8IVG5 1584 aa31.77■■■□□ 2.68
COPE-207ENST00000597646 DIP2CQ9Y2E4 1556 aa31.77■■■□□ 2.68
COPE-207ENST00000597646 ABCA6Q8N139 1617 aa31.74■■■□□ 2.67
COPE-207ENST00000597646 SYCP2Q9BX26 1530 aa31.74■■■□□ 2.67
COPE-207ENST00000597646 EHBP1L1Q8N3D4 1523 aa31.73■■■□□ 2.67
COPE-207ENST00000597646 SPAG9O60271 1321 aaKnown RBP31.7■■■□□ 2.66
COPE-207ENST00000597646 PLEKHH2Q8IVE3 1493 aa31.68■■■□□ 2.66
COPE-207ENST00000597646 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
COPE-207ENST00000597646 ESF1Q9H501 851 aaKnown RBP31.67■■■□□ 2.66
COPE-207ENST00000597646 CEBPAP49715 358 aaPredicted RBP31.66■■■□□ 2.66
COPE-207ENST00000597646 LMTK3Q96Q04 1460 aa31.65■■■□□ 2.66
COPE-207ENST00000597646 REREQ9P2R6 1566 aa31.65■■■□□ 2.66
COPE-207ENST00000597646 TIAM1Q13009 1591 aa31.64■■■□□ 2.66
COPE-207ENST00000597646 KIAA1107Q9UPP5 1409 aa31.64■■■□□ 2.66
COPE-207ENST00000597646 ZNF644Q9H582 1327 aaPredicted RBP31.63■■■□□ 2.65
COPE-207ENST00000597646 HSPA2P54652 639 aa31.62■■■□□ 2.65
COPE-207ENST00000597646 VPS8Q8N3P4 1428 aa31.61■■■□□ 2.65
COPE-207ENST00000597646 SUPT6HQ7KZ85 1726 aaKnown RBP31.58■■■□□ 2.65
COPE-207ENST00000597646 AGLP35573 1532 aa31.58■■■□□ 2.65
COPE-207ENST00000597646 ATP7AQ04656 1500 aa31.56■■■□□ 2.64
COPE-207ENST00000597646 NCOA2Q15596 1464 aa31.56■■■□□ 2.64
COPE-207ENST00000597646 ILDR1Q86SU0 546 aaPredicted RBP31.54■■■□□ 2.64
COPE-207ENST00000597646 INO80Q9ULG1 1556 aaPredicted RBP31.49■■■□□ 2.63
COPE-207ENST00000597646 A2MP01023 1474 aa31.46■■■□□ 2.63
COPE-207ENST00000597646 LRRC9Q6ZRR7 1453 aa31.46■■■□□ 2.63
COPE-207ENST00000597646 PREX1Q8TCU6 1659 aa31.46■■■□□ 2.63
COPE-207ENST00000597646 MBD5Q9P267 1494 aa31.46■■■□□ 2.63
COPE-207ENST00000597646 C3P01024 1663 aa31.44■■■□□ 2.62
COPE-207ENST00000597646 KANK4Q5T7N3 995 aaPredicted RBP31.43■■■□□ 2.62
COPE-207ENST00000597646 GGT6Q6P531 493 aa31.43■■■□□ 2.62
COPE-207ENST00000597646 CAMSAP2Q08AD1 1489 aa31.43■■■□□ 2.62
COPE-207ENST00000597646 CNTLNQ9NXG0 1405 aa31.42■■■□□ 2.62
COPE-207ENST00000597646 APLP2Q06481 763 aa31.42■■■□□ 2.62
COPE-207ENST00000597646 UHRF1BP1Q6BDS2 1440 aa31.41■■■□□ 2.62
COPE-207ENST00000597646 SETD1BQ9UPS6 1966 aaKnown RBP31.39■■■□□ 2.62
COPE-207ENST00000597646 ADGBQ8N7X0 1667 aa31.39■■■□□ 2.62
COPE-207ENST00000597646 RSPH4AQ5TD94 716 aa31.38■■■□□ 2.61
COPE-207ENST00000597646 RTEL1-TNFRSF6BF6WH68 1400 aa31.37■■■□□ 2.61
COPE-207ENST00000597646 CCDC141Q6ZP82 1450 aa31.37■■■□□ 2.61
COPE-207ENST00000597646 PLXNC1O60486 1568 aa31.36■■■□□ 2.61
COPE-207ENST00000597646 MAP3K1Q13233 1512 aa31.35■■■□□ 2.61
COPE-207ENST00000597646 TSPY4P0CV99 314 aa31.34■■■□□ 2.61
COPE-207ENST00000597646 TSPY10P0CW01 314 aa31.34■■■□□ 2.61
COPE-207ENST00000597646 ZMYM3Q14202 1370 aa31.32■■■□□ 2.6
COPE-207ENST00000597646 CLTCQ00610 1675 aaKnown RBP31.31■■■□□ 2.6
COPE-207ENST00000597646 DHX29Q7Z478 1369 aaKnown RBP31.3■■■□□ 2.6
COPE-207ENST00000597646 MROH2AA6NES4 1674 aa31.29■■■□□ 2.6
COPE-207ENST00000597646 KIF3BO15066 747 aa31.27■■■□□ 2.6
COPE-207ENST00000597646 ARHGEF5Q12774 1597 aa31.25■■■□□ 2.59
COPE-207ENST00000597646 PPP6R1Q9UPN7 881 aa31.24■■■□□ 2.59
COPE-207ENST00000597646 MYOM3Q5VTT5 1437 aa31.24■■■□□ 2.59
COPE-207ENST00000597646 DMRT2Q9Y5R5 561 aa31.22■■■□□ 2.59
COPE-207ENST00000597646 FBXO41Q8TF61 875 aa31.21■■■□□ 2.59
COPE-207ENST00000597646 NPATQ14207 1427 aa31.21■■■□□ 2.59
COPE-207ENST00000597646 MIA2Q96PC5 1412 aa31.19■■■□□ 2.58
COPE-207ENST00000597646 STRCQ7RTU9 1775 aa31.17■■■□□ 2.58
COPE-207ENST00000597646 WASHC2CQ9Y4E1 1318 aa31.13■■■□□ 2.57
COPE-207ENST00000597646 PTPRKQ15262 1439 aa31.12■■■□□ 2.57
COPE-207ENST00000597646 CERKQ8TCT0 537 aa31.09■■■□□ 2.57
COPE-207ENST00000597646 MAST1Q9Y2H9 1570 aa31.08■■■□□ 2.57
COPE-207ENST00000597646 CAMSAP1Q5T5Y3 1602 aa31.06■■■□□ 2.56
COPE-207ENST00000597646 MYO3AQ8NEV4 1616 aa31.06■■■□□ 2.56
COPE-207ENST00000597646 PTPN23Q9H3S7 1636 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms