RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 BCORL1Q5H9F3 1711 aa18.91■□□□□ 0.62
SYMPK-207ENST00000596824 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
SYMPK-207ENST00000596824 ADAMTSL3P82987 1691 aa18.9■□□□□ 0.62
SYMPK-207ENST00000596824 SIGLEC1Q9BZZ2 1709 aa18.9■□□□□ 0.62
SYMPK-207ENST00000596824 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
SYMPK-207ENST00000596824 ITSN2Q9NZM3 1697 aa18.89■□□□□ 0.61
SYMPK-207ENST00000596824 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
SYMPK-207ENST00000596824 ZFYVE16Q7Z3T8 1539 aa18.87■□□□□ 0.61
SYMPK-207ENST00000596824 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
SYMPK-207ENST00000596824 KDM5CP41229 1560 aa18.84■□□□□ 0.61
SYMPK-207ENST00000596824 ABCC1P33527 1531 aa18.83■□□□□ 0.6
SYMPK-207ENST00000596824 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.6
SYMPK-207ENST00000596824 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
SYMPK-207ENST00000596824 EFCAB2Q5VUJ9 269 aa18.82■□□□□ 0.6
SYMPK-207ENST00000596824 HECW2Q9P2P5 1572 aa18.81■□□□□ 0.6
SYMPK-207ENST00000596824 YEATS2Q9ULM3 1422 aa18.8■□□□□ 0.6
SYMPK-207ENST00000596824 RIMS1Q86UR5 1692 aaKnown RBP18.79■□□□□ 0.6
SYMPK-207ENST00000596824 ZNF518AQ6AHZ1 1483 aa18.79■□□□□ 0.6
SYMPK-207ENST00000596824 SAMD9LQ8IVG5 1584 aa18.79■□□□□ 0.6
SYMPK-207ENST00000596824 EHBP1L1Q8N3D4 1523 aa18.79■□□□□ 0.6
SYMPK-207ENST00000596824 FER1L4A9Z1Z3 1794 aa18.78■□□□□ 0.6
SYMPK-207ENST00000596824 ABCA6Q8N139 1617 aa18.76■□□□□ 0.59
SYMPK-207ENST00000596824 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
SYMPK-207ENST00000596824 LOC105371045A0A1W2PR82 267 aa18.75■□□□□ 0.59
SYMPK-207ENST00000596824 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
SYMPK-207ENST00000596824 DIP2CQ9Y2E4 1556 aa18.75■□□□□ 0.59
SYMPK-207ENST00000596824 GPATCH8Q9UKJ3 1502 aaKnown RBP18.74■□□□□ 0.59
SYMPK-207ENST00000596824 KIDINS220Q9ULH0 1771 aa18.74■□□□□ 0.59
SYMPK-207ENST00000596824 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
SYMPK-207ENST00000596824 PTPRMP28827 1452 aa18.72■□□□□ 0.59
SYMPK-207ENST00000596824 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
SYMPK-207ENST00000596824 ATP10AO60312 1499 aa18.71■□□□□ 0.59
SYMPK-207ENST00000596824 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
SYMPK-207ENST00000596824 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
SYMPK-207ENST00000596824 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
SYMPK-207ENST00000596824 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
SYMPK-207ENST00000596824 VPS8Q8N3P4 1428 aa18.7■□□□□ 0.58
SYMPK-207ENST00000596824 TRAPPC8Q9Y2L5 1435 aa18.7■□□□□ 0.58
SYMPK-207ENST00000596824 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
SYMPK-207ENST00000596824 AFAP1Q8N556 730 aa18.67■□□□□ 0.58
SYMPK-207ENST00000596824 CCNB3Q8WWL7 1395 aa18.67■□□□□ 0.58
SYMPK-207ENST00000596824 INO80Q9ULG1 1556 aaPredicted RBP18.66■□□□□ 0.58
SYMPK-207ENST00000596824 PLEKHH2Q8IVE3 1493 aa18.64■□□□□ 0.57
SYMPK-207ENST00000596824 KIAA1107Q9UPP5 1409 aa18.62■□□□□ 0.57
SYMPK-207ENST00000596824 NCOA2Q15596 1464 aa18.62■□□□□ 0.57
SYMPK-207ENST00000596824 ADGBQ8N7X0 1667 aa18.61■□□□□ 0.57
SYMPK-207ENST00000596824 ATP7AQ04656 1500 aa18.61■□□□□ 0.57
SYMPK-207ENST00000596824 MAP3K1Q13233 1512 aa18.61■□□□□ 0.57
SYMPK-207ENST00000596824 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
SYMPK-207ENST00000596824 AGLP35573 1532 aa18.6■□□□□ 0.57
SYMPK-207ENST00000596824 CFDP1Q9UEE9 299 aaPredicted RBP18.6■□□□□ 0.57
SYMPK-207ENST00000596824 LRRC9Q6ZRR7 1453 aa18.59■□□□□ 0.57
SYMPK-207ENST00000596824 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
SYMPK-207ENST00000596824 C3P01024 1663 aa18.57■□□□□ 0.56
SYMPK-207ENST00000596824 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
SYMPK-207ENST00000596824 MLECQ14165 292 aa18.56■□□□□ 0.56
SYMPK-207ENST00000596824 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
SYMPK-207ENST00000596824 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
SYMPK-207ENST00000596824 CAMSAP2Q08AD1 1489 aa18.54■□□□□ 0.56
SYMPK-207ENST00000596824 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
SYMPK-207ENST00000596824 LMTK3Q96Q04 1460 aa18.53■□□□□ 0.56
SYMPK-207ENST00000596824 MROH2AA6NES4 1674 aa18.53■□□□□ 0.56
SYMPK-207ENST00000596824 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
SYMPK-207ENST00000596824 SPAG9O60271 1321 aaKnown RBP18.51■□□□□ 0.55
SYMPK-207ENST00000596824 ARHGEF5Q12774 1597 aa18.51■□□□□ 0.55
SYMPK-207ENST00000596824 SETD1BQ9UPS6 1966 aaKnown RBP18.5■□□□□ 0.55
SYMPK-207ENST00000596824 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
SYMPK-207ENST00000596824 CCDC141Q6ZP82 1450 aa18.48■□□□□ 0.55
SYMPK-207ENST00000596824 A2MP01023 1474 aa18.47■□□□□ 0.55
SYMPK-207ENST00000596824 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
SYMPK-207ENST00000596824 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
SYMPK-207ENST00000596824 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
SYMPK-207ENST00000596824 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
SYMPK-207ENST00000596824 MAST1Q9Y2H9 1570 aa18.43■□□□□ 0.54
SYMPK-207ENST00000596824 MYOM3Q5VTT5 1437 aa18.43■□□□□ 0.54
SYMPK-207ENST00000596824 MIA2Q96PC5 1412 aa18.4■□□□□ 0.54
SYMPK-207ENST00000596824 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
SYMPK-207ENST00000596824 PTPN23Q9H3S7 1636 aa18.4■□□□□ 0.54
SYMPK-207ENST00000596824 CEBPAP49715 358 aaPredicted RBP18.39■□□□□ 0.53
SYMPK-207ENST00000596824 STRCQ7RTU9 1775 aa18.37■□□□□ 0.53
SYMPK-207ENST00000596824 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
SYMPK-207ENST00000596824 EIF2AK4Q9P2K8 1649 aaKnown RBP18.35■□□□□ 0.53
SYMPK-207ENST00000596824 APLP2Q06481 763 aa18.35■□□□□ 0.53
SYMPK-207ENST00000596824 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-207ENST00000596824 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
SYMPK-207ENST00000596824 DHX29Q7Z478 1369 aaKnown RBP18.34■□□□□ 0.53
SYMPK-207ENST00000596824 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
SYMPK-207ENST00000596824 MYO3AQ8NEV4 1616 aa18.34■□□□□ 0.53
SYMPK-207ENST00000596824 RNF17Q9BXT8 1623 aaKnown RBP18.34■□□□□ 0.53
SYMPK-207ENST00000596824 HSPA2P54652 639 aa18.33■□□□□ 0.52
SYMPK-207ENST00000596824 UHRF1BP1Q6BDS2 1440 aa18.32■□□□□ 0.52
SYMPK-207ENST00000596824 FAM135AQ9P2D6 1515 aa18.32■□□□□ 0.52
SYMPK-207ENST00000596824 TCOF1Q13428 1488 aaKnown RBP18.31■□□□□ 0.52
SYMPK-207ENST00000596824 NPATQ14207 1427 aa18.31■□□□□ 0.52
SYMPK-207ENST00000596824 ZC3H13Q5T200 1668 aaKnown RBP18.3■□□□□ 0.52
SYMPK-207ENST00000596824 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
SYMPK-207ENST00000596824 ZMYM3Q14202 1370 aa18.3■□□□□ 0.52
SYMPK-207ENST00000596824 KDM5DQ9BY66 1539 aa18.29■□□□□ 0.52
SYMPK-207ENST00000596824 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
SYMPK-207ENST00000596824 CEP152O94986 1710 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms