RNA–Protein interactions for RNA: ENST00000596788.1

IRF3-214, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-214ENST00000596788 MIA2Q96PC5 1412 aa32.08■■■□□ 2.73
IRF3-214ENST00000596788 FAM69CQ0P6D2 419 aa32.05■■■□□ 2.72
IRF3-214ENST00000596788 CD109Q6YHK3 1445 aa32.05■■■□□ 2.72
IRF3-214ENST00000596788 PPRC1Q5VV67 1664 aaKnown RBP32.03■■■□□ 2.72
IRF3-214ENST00000596788 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
IRF3-214ENST00000596788 SAMD9LQ8IVG5 1584 aa32.02■■■□□ 2.72
IRF3-214ENST00000596788 TSPOAP1O95153 1857 aa32.01■■■□□ 2.71
IRF3-214ENST00000596788 CAMSAP2Q08AD1 1489 aa32■■■□□ 2.71
IRF3-214ENST00000596788 CFDP1Q9UEE9 299 aaPredicted RBP32■■■□□ 2.71
IRF3-214ENST00000596788 CFAP74Q9C0B2 1584 aa31.98■■■□□ 2.71
IRF3-214ENST00000596788 FANCAO15360 1455 aa31.96■■■□□ 2.71
IRF3-214ENST00000596788 ABCC1P33527 1531 aa31.92■■■□□ 2.7
IRF3-214ENST00000596788 ZNF644Q9H582 1327 aaPredicted RBP31.92■■■□□ 2.7
IRF3-214ENST00000596788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.79e-6■□□□□ 9.6
IRF3-214ENST00000596788 EFCAB2Q5VUJ9 269 aa31.89■■■□□ 2.7
IRF3-214ENST00000596788 ZNF777Q9ULD5 760 aaPredicted RBP31.89■■■□□ 2.7
IRF3-214ENST00000596788 FAM50AQ14320 339 aaKnown RBP31.88■■■□□ 2.69
IRF3-214ENST00000596788 SYCP2Q9BX26 1530 aa31.88■■■□□ 2.69
IRF3-214ENST00000596788 NEO1Q92859 1461 aa31.87■■■□□ 2.69
IRF3-214ENST00000596788 TRIM26Q12899 539 aaPredicted RBP31.87■■■□□ 2.69
IRF3-214ENST00000596788 DNMT1P26358 1616 aaKnown RBP31.86■■■□□ 2.69
IRF3-214ENST00000596788 PLEKHH2Q8IVE3 1493 aa31.85■■■□□ 2.69
IRF3-214ENST00000596788 TEX14Q8IWB6 1497 aa31.85■■■□□ 2.69
IRF3-214ENST00000596788 CROCC2H7BZ55 1655 aa31.83■■■□□ 2.69
IRF3-214ENST00000596788 ARHGEF5Q12774 1597 aa31.83■■■□□ 2.69
IRF3-214ENST00000596788 ARHGEF12Q9NZN5 1544 aa31.83■■■□□ 2.69
IRF3-214ENST00000596788 AKNAQ7Z591 1439 aa31.83■■■□□ 2.69
IRF3-214ENST00000596788 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
IRF3-214ENST00000596788 ADGRL1O94910 1474 aa31.82■■■□□ 2.68
IRF3-214ENST00000596788 KIAA1107Q9UPP5 1409 aa31.81■■■□□ 2.68
IRF3-214ENST00000596788 MBD5Q9P267 1494 aa31.8■■■□□ 2.68
IRF3-214ENST00000596788 DAPK1P53355 1430 aa31.75■■■□□ 2.67
IRF3-214ENST00000596788 CCDC141Q6ZP82 1450 aa31.74■■■□□ 2.67
IRF3-214ENST00000596788 ABCC5O15440 1437 aa31.74■■■□□ 2.67
IRF3-214ENST00000596788 SCAPERQ9BY12 1400 aa31.73■■■□□ 2.67
IRF3-214ENST00000596788 HNRNPMP52272 730 aaKnown RBP eCLIP31.72■■■□□ 2.67
IRF3-214ENST00000596788 TRAPPC8Q9Y2L5 1435 aa31.71■■■□□ 2.67
IRF3-214ENST00000596788 PTPRKQ15262 1439 aa31.7■■■□□ 2.67
IRF3-214ENST00000596788 RICTORQ6R327 1708 aa31.69■■■□□ 2.66
IRF3-214ENST00000596788 ADGBQ8N7X0 1667 aa31.68■■■□□ 2.66
IRF3-214ENST00000596788 SHANK2Q9UPX8 1470 aa31.68■■■□□ 2.66
IRF3-214ENST00000596788 POGZQ7Z3K3 1410 aa31.67■■■□□ 2.66
IRF3-214ENST00000596788 ITGAEP38570 1179 aa31.67■■■□□ 2.66
IRF3-214ENST00000596788 FRMPD1Q5SYB0 1578 aa31.67■■■□□ 2.66
IRF3-214ENST00000596788 MAST1Q9Y2H9 1570 aa31.65■■■□□ 2.66
IRF3-214ENST00000596788 DENND4BO75064 1496 aaPredicted RBP31.65■■■□□ 2.66
IRF3-214ENST00000596788 KDM5CP41229 1560 aa31.64■■■□□ 2.66
IRF3-214ENST00000596788 ZNF518AQ6AHZ1 1483 aa31.63■■■□□ 2.65
IRF3-214ENST00000596788 INO80Q9ULG1 1556 aaPredicted RBP31.61■■■□□ 2.65
IRF3-214ENST00000596788 C9orf84Q5VXU9 1444 aa31.61■■■□□ 2.65
IRF3-214ENST00000596788 PCGF6Q9BYE7 350 aa31.61■■■□□ 2.65
IRF3-214ENST00000596788 RSPH4AQ5TD94 716 aa31.59■■■□□ 2.65
IRF3-214ENST00000596788 ZFYVE16Q7Z3T8 1539 aa31.59■■■□□ 2.65
IRF3-214ENST00000596788 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
IRF3-214ENST00000596788 COL17A1Q9UMD9 1497 aaPredicted RBP31.57■■■□□ 2.64
IRF3-214ENST00000596788 HECW2Q9P2P5 1572 aa31.56■■■□□ 2.64
IRF3-214ENST00000596788 AFAP1Q8N556 730 aa31.55■■■□□ 2.64
IRF3-214ENST00000596788 ZMYM4Q5VZL5 1548 aa31.54■■■□□ 2.64
IRF3-214ENST00000596788 PLXNC1O60486 1568 aa31.54■■■□□ 2.64
IRF3-214ENST00000596788 ATP7AQ04656 1500 aa31.54■■■□□ 2.64
IRF3-214ENST00000596788 KIDINS220Q9ULH0 1771 aa31.53■■■□□ 2.64
IRF3-214ENST00000596788 GCC2Q8IWJ2 1684 aa31.53■■■□□ 2.64
IRF3-214ENST00000596788 CHIC2Q9UKJ5 165 aa31.52■■■□□ 2.64
IRF3-214ENST00000596788 KDM6BO15054 1643 aa31.52■■■□□ 2.64
IRF3-214ENST00000596788 RAPGEF3O95398 923 aa31.51■■■□□ 2.63
IRF3-214ENST00000596788 ROCK1Q13464 1354 aa31.51■■■□□ 2.63
IRF3-214ENST00000596788 TSPY4P0CV99 314 aa31.49■■■□□ 2.63
IRF3-214ENST00000596788 TSPY10P0CW01 314 aa31.49■■■□□ 2.63
IRF3-214ENST00000596788 SPAG9O60271 1321 aaKnown RBP31.49■■■□□ 2.63
IRF3-214ENST00000596788 RTEL1-TNFRSF6BF6WH68 1400 aa31.48■■■□□ 2.63
IRF3-214ENST00000596788 MLH3Q9UHC1 1453 aa31.47■■■□□ 2.63
IRF3-214ENST00000596788 NCOA1Q15788 1441 aa31.46■■■□□ 2.63
IRF3-214ENST00000596788 ABCA6Q8N139 1617 aa31.46■■■□□ 2.63
IRF3-214ENST00000596788 ANKRD30AQ9BXX3 1397 aa31.44■■■□□ 2.62
IRF3-214ENST00000596788 HFM1A2PYH4 1435 aa31.44■■■□□ 2.62
IRF3-214ENST00000596788 NAIPQ13075 1403 aa31.41■■■□□ 2.62
IRF3-214ENST00000596788 DIP2CQ9Y2E4 1556 aa31.4■■■□□ 2.62
IRF3-214ENST00000596788 RRP7BPQ9NSQ0 103 aa31.4■■■□□ 2.62
IRF3-214ENST00000596788 KIF15Q9NS87 1388 aa31.39■■■□□ 2.62
IRF3-214ENST00000596788 MAGI2Q86UL8 1455 aa31.37■■■□□ 2.61
IRF3-214ENST00000596788 ARHGEF40Q8TER5 1519 aa31.37■■■□□ 2.61
IRF3-214ENST00000596788 YEATS2Q9ULM3 1422 aa31.35■■■□□ 2.61
IRF3-214ENST00000596788 DUOX2Q9NRD8 1548 aa31.34■■■□□ 2.61
IRF3-214ENST00000596788 SETD5Q9C0A6 1442 aa31.33■■■□□ 2.61
IRF3-214ENST00000596788 MYT1LQ9UL68 1186 aa31.32■■■□□ 2.6
IRF3-214ENST00000596788 RAB3GAP2Q9H2M9 1393 aa31.28■■■□□ 2.6
IRF3-214ENST00000596788 ANKRD50Q9ULJ7 1429 aa31.27■■■□□ 2.6
IRF3-214ENST00000596788 A2MP01023 1474 aa31.26■■■□□ 2.59
IRF3-214ENST00000596788 ERBINQ96RT1 1412 aa31.25■■■□□ 2.59
IRF3-214ENST00000596788 EIF2AK4Q9P2K8 1649 aaKnown RBP31.25■■■□□ 2.59
IRF3-214ENST00000596788 REREQ9P2R6 1566 aa31.24■■■□□ 2.59
IRF3-214ENST00000596788 ATP10AO60312 1499 aa31.21■■■□□ 2.59
IRF3-214ENST00000596788 SIGLEC1Q9BZZ2 1709 aa31.21■■■□□ 2.59
IRF3-214ENST00000596788 DHX29Q7Z478 1369 aaKnown RBP31.2■■■□□ 2.59
IRF3-214ENST00000596788 BCORL1Q5H9F3 1711 aa31.2■■■□□ 2.58
IRF3-214ENST00000596788 UNC13BO14795 1591 aa31.17■■■□□ 2.58
IRF3-214ENST00000596788 DEPDC5O75140 1603 aa31.16■■■□□ 2.58
IRF3-214ENST00000596788 RNF17Q9BXT8 1623 aaKnown RBP31.13■■■□□ 2.57
IRF3-214ENST00000596788 MROH1Q8NDA8 1641 aa31.11■■■□□ 2.57
IRF3-214ENST00000596788 AGLP35573 1532 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms