RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
IRF3-213ENST00000596765 DENND4BO75064 1496 aaPredicted RBP20.91■□□□□ 0.94
IRF3-213ENST00000596765 ADGRL1O94910 1474 aa20.9■□□□□ 0.94
IRF3-213ENST00000596765 GPATCH8Q9UKJ3 1502 aaKnown RBP20.89■□□□□ 0.94
IRF3-213ENST00000596765 EHBP1L1Q8N3D4 1523 aa20.88■□□□□ 0.93
IRF3-213ENST00000596765 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
IRF3-213ENST00000596765 SIGLEC1Q9BZZ2 1709 aa20.88■□□□□ 0.93
IRF3-213ENST00000596765 EFCAB2Q5VUJ9 269 aa20.88■□□□□ 0.93
IRF3-213ENST00000596765 ARHGEF12Q9NZN5 1544 aa20.88■□□□□ 0.93
IRF3-213ENST00000596765 MTUS2Q5JR59 1369 aa20.87■□□□□ 0.93
IRF3-213ENST00000596765 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
IRF3-213ENST00000596765 ZMYM4Q5VZL5 1548 aa20.87■□□□□ 0.93
IRF3-213ENST00000596765 ITSN2Q9NZM3 1697 aa20.86■□□□□ 0.93
IRF3-213ENST00000596765 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
IRF3-213ENST00000596765 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
IRF3-213ENST00000596765 ABCC1P33527 1531 aa20.84■□□□□ 0.93
IRF3-213ENST00000596765 KANK4Q5T7N3 995 aaPredicted RBP20.83■□□□□ 0.93
IRF3-213ENST00000596765 MAP3K1Q13233 1512 aa20.83■□□□□ 0.92
IRF3-213ENST00000596765 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.92
IRF3-213ENST00000596765 SUPT6HQ7KZ85 1726 aaKnown RBP20.82■□□□□ 0.92
IRF3-213ENST00000596765 YEATS2Q9ULM3 1422 aa20.82■□□□□ 0.92
IRF3-213ENST00000596765 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
IRF3-213ENST00000596765 KDM5CP41229 1560 aa20.8■□□□□ 0.92
IRF3-213ENST00000596765 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
IRF3-213ENST00000596765 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
IRF3-213ENST00000596765 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
IRF3-213ENST00000596765 CCNB3Q8WWL7 1395 aa20.77■□□□□ 0.92
IRF3-213ENST00000596765 ZFYVE16Q7Z3T8 1539 aa20.77■□□□□ 0.92
IRF3-213ENST00000596765 SYCP2Q9BX26 1530 aa20.76■□□□□ 0.91
IRF3-213ENST00000596765 KIDINS220Q9ULH0 1771 aa20.75■□□□□ 0.91
IRF3-213ENST00000596765 ZNF644Q9H582 1327 aaPredicted RBP20.75■□□□□ 0.91
IRF3-213ENST00000596765 ZNF518AQ6AHZ1 1483 aa20.75■□□□□ 0.91
IRF3-213ENST00000596765 MAGI2Q86UL8 1455 aa20.74■□□□□ 0.91
IRF3-213ENST00000596765 ADAMTSL3P82987 1691 aa20.73■□□□□ 0.91
IRF3-213ENST00000596765 BCORL1Q5H9F3 1711 aa20.73■□□□□ 0.91
IRF3-213ENST00000596765 ZNF777Q9ULD5 760 aaPredicted RBP20.73■□□□□ 0.91
IRF3-213ENST00000596765 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
IRF3-213ENST00000596765 ABCA6Q8N139 1617 aa20.72■□□□□ 0.91
IRF3-213ENST00000596765 CFDP1Q9UEE9 299 aaPredicted RBP20.72■□□□□ 0.91
IRF3-213ENST00000596765 DIP2CQ9Y2E4 1556 aa20.71■□□□□ 0.91
IRF3-213ENST00000596765 HNRNPMP52272 730 aaKnown RBP eCLIP20.7■□□□□ 0.9
IRF3-213ENST00000596765 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
IRF3-213ENST00000596765 MBD5Q9P267 1494 aa20.69■□□□□ 0.9
IRF3-213ENST00000596765 MLH3Q9UHC1 1453 aa20.69■□□□□ 0.9
IRF3-213ENST00000596765 ATP10AO60312 1499 aa20.66■□□□□ 0.9
IRF3-213ENST00000596765 MADDQ8WXG6 1647 aa20.64■□□□□ 0.9
IRF3-213ENST00000596765 INO80Q9ULG1 1556 aaPredicted RBP20.64■□□□□ 0.9
IRF3-213ENST00000596765 CAMSAP2Q08AD1 1489 aa20.63■□□□□ 0.89
IRF3-213ENST00000596765 PLEKHH2Q8IVE3 1493 aa20.63■□□□□ 0.89
IRF3-213ENST00000596765 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
IRF3-213ENST00000596765 REREQ9P2R6 1566 aa20.61■□□□□ 0.89
IRF3-213ENST00000596765 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
IRF3-213ENST00000596765 ATP7AQ04656 1500 aa20.59■□□□□ 0.89
IRF3-213ENST00000596765 ARID4BQ4LE39 1312 aaPredicted RBP20.58■□□□□ 0.89
IRF3-213ENST00000596765 RIMS1Q86UR5 1692 aaKnown RBP20.58■□□□□ 0.89
IRF3-213ENST00000596765 FER1L4A9Z1Z3 1794 aa20.57■□□□□ 0.88
IRF3-213ENST00000596765 SPAG9O60271 1321 aaKnown RBP20.56■□□□□ 0.88
IRF3-213ENST00000596765 ARHGEF5Q12774 1597 aa20.56■□□□□ 0.88
IRF3-213ENST00000596765 APLP2Q06481 763 aa20.56■□□□□ 0.88
IRF3-213ENST00000596765 ADGBQ8N7X0 1667 aa20.56■□□□□ 0.88
IRF3-213ENST00000596765 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
IRF3-213ENST00000596765 PTPRMP28827 1452 aa20.54■□□□□ 0.88
IRF3-213ENST00000596765 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
IRF3-213ENST00000596765 AGLP35573 1532 aa20.53■□□□□ 0.88
IRF3-213ENST00000596765 CCDC141Q6ZP82 1450 aa20.53■□□□□ 0.88
IRF3-213ENST00000596765 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
IRF3-213ENST00000596765 PLXNC1O60486 1568 aa20.52■□□□□ 0.88
IRF3-213ENST00000596765 MLECQ14165 292 aa20.52■□□□□ 0.88
IRF3-213ENST00000596765 RTEL1-TNFRSF6BF6WH68 1400 aa20.48■□□□□ 0.87
IRF3-213ENST00000596765 FGD6Q6ZV73 1430 aa20.48■□□□□ 0.87
IRF3-213ENST00000596765 CROCC2H7BZ55 1655 aa20.48■□□□□ 0.87
IRF3-213ENST00000596765 A2MP01023 1474 aa20.47■□□□□ 0.87
IRF3-213ENST00000596765 MAST1Q9Y2H9 1570 aa20.46■□□□□ 0.87
IRF3-213ENST00000596765 TCOF1Q13428 1488 aaKnown RBP20.46■□□□□ 0.87
IRF3-213ENST00000596765 PPARGC1BQ86YN6 1023 aaKnown RBP20.45■□□□□ 0.86
IRF3-213ENST00000596765 RSPH4AQ5TD94 716 aa20.43■□□□□ 0.86
IRF3-213ENST00000596765 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
IRF3-213ENST00000596765 ABCC5O15440 1437 aa20.42■□□□□ 0.86
IRF3-213ENST00000596765 C3P01024 1663 aa20.41■□□□□ 0.86
IRF3-213ENST00000596765 DHX29Q7Z478 1369 aaKnown RBP20.39■□□□□ 0.85
IRF3-213ENST00000596765 FBXO41Q8TF61 875 aa20.39■□□□□ 0.85
IRF3-213ENST00000596765 SETD1BQ9UPS6 1966 aaKnown RBP20.39■□□□□ 0.85
IRF3-213ENST00000596765 DAPK1P53355 1430 aa20.37■□□□□ 0.85
IRF3-213ENST00000596765 CEBPAP49715 358 aaPredicted RBP20.37■□□□□ 0.85
IRF3-213ENST00000596765 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
IRF3-213ENST00000596765 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
IRF3-213ENST00000596765 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
IRF3-213ENST00000596765 MROH2AA6NES4 1674 aa20.35■□□□□ 0.85
IRF3-213ENST00000596765 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
IRF3-213ENST00000596765 SHANK2Q9UPX8 1470 aa20.34■□□□□ 0.85
IRF3-213ENST00000596765 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
IRF3-213ENST00000596765 LMTK3Q96Q04 1460 aa20.3■□□□□ 0.84
IRF3-213ENST00000596765 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
IRF3-213ENST00000596765 GGT6Q6P531 493 aa20.3■□□□□ 0.84
IRF3-213ENST00000596765 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
IRF3-213ENST00000596765 RNF17Q9BXT8 1623 aaKnown RBP20.3■□□□□ 0.84
IRF3-213ENST00000596765 KIF3BO15066 747 aa20.29■□□□□ 0.84
IRF3-213ENST00000596765 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
IRF3-213ENST00000596765 EIF2AK4Q9P2K8 1649 aaKnown RBP20.27■□□□□ 0.84
IRF3-213ENST00000596765 CFAP65Q6ZU64 1925 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms