RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 MAP3K1Q13233 1512 aa21.8■■□□□ 1.08
SHKBP1-207ENST00000595631 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
SHKBP1-207ENST00000595631 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
SHKBP1-207ENST00000595631 ITSN2Q9NZM3 1697 aa21.77■■□□□ 1.08
SHKBP1-207ENST00000595631 ADGRL1O94910 1474 aa21.77■■□□□ 1.07
SHKBP1-207ENST00000595631 GPATCH8Q9UKJ3 1502 aaKnown RBP21.76■■□□□ 1.07
SHKBP1-207ENST00000595631 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
SHKBP1-207ENST00000595631 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
SHKBP1-207ENST00000595631 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
SHKBP1-207ENST00000595631 SAMD9LQ8IVG5 1584 aa21.74■■□□□ 1.07
SHKBP1-207ENST00000595631 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
SHKBP1-207ENST00000595631 DENND4BO75064 1496 aaPredicted RBP21.73■■□□□ 1.07
SHKBP1-207ENST00000595631 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
SHKBP1-207ENST00000595631 ABCC1P33527 1531 aa21.72■■□□□ 1.07
SHKBP1-207ENST00000595631 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
SHKBP1-207ENST00000595631 POGZQ7Z3K3 1410 aa21.69■■□□□ 1.06
SHKBP1-207ENST00000595631 APLP2Q06481 763 aa21.68■■□□□ 1.06
SHKBP1-207ENST00000595631 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
SHKBP1-207ENST00000595631 ZMYM4Q5VZL5 1548 aa21.67■■□□□ 1.06
SHKBP1-207ENST00000595631 ZNF777Q9ULD5 760 aaPredicted RBP21.66■■□□□ 1.06
SHKBP1-207ENST00000595631 SYCP2Q9BX26 1530 aa21.65■■□□□ 1.06
SHKBP1-207ENST00000595631 CFDP1Q9UEE9 299 aaPredicted RBP21.64■■□□□ 1.05
SHKBP1-207ENST00000595631 ARHGEF40Q8TER5 1519 aa21.64■■□□□ 1.05
SHKBP1-207ENST00000595631 KDM5CP41229 1560 aa21.62■■□□□ 1.05
SHKBP1-207ENST00000595631 TRAPPC8Q9Y2L5 1435 aa21.62■■□□□ 1.05
SHKBP1-207ENST00000595631 ZFYVE16Q7Z3T8 1539 aa21.6■■□□□ 1.05
SHKBP1-207ENST00000595631 ZNF518AQ6AHZ1 1483 aa21.6■■□□□ 1.05
SHKBP1-207ENST00000595631 SIGLEC1Q9BZZ2 1709 aa21.6■■□□□ 1.05
SHKBP1-207ENST00000595631 ZNF644Q9H582 1327 aaPredicted RBP21.59■■□□□ 1.05
SHKBP1-207ENST00000595631 HECW2Q9P2P5 1572 aa21.59■■□□□ 1.05
SHKBP1-207ENST00000595631 YEATS2Q9ULM3 1422 aa21.59■■□□□ 1.05
SHKBP1-207ENST00000595631 AFAP1Q8N556 730 aa21.58■■□□□ 1.05
SHKBP1-207ENST00000595631 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
SHKBP1-207ENST00000595631 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.04
SHKBP1-207ENST00000595631 KIDINS220Q9ULH0 1771 aa21.56■■□□□ 1.04
SHKBP1-207ENST00000595631 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
SHKBP1-207ENST00000595631 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
SHKBP1-207ENST00000595631 PLEKHH2Q8IVE3 1493 aa21.55■■□□□ 1.04
SHKBP1-207ENST00000595631 MAGI2Q86UL8 1455 aa21.54■■□□□ 1.04
SHKBP1-207ENST00000595631 KIAA1107Q9UPP5 1409 aa21.53■■□□□ 1.04
SHKBP1-207ENST00000595631 DIP2CQ9Y2E4 1556 aa21.53■■□□□ 1.04
SHKBP1-207ENST00000595631 INO80Q9ULG1 1556 aaPredicted RBP21.51■■□□□ 1.03
SHKBP1-207ENST00000595631 MBD5Q9P267 1494 aa21.51■■□□□ 1.03
SHKBP1-207ENST00000595631 PPARGC1BQ86YN6 1023 aaKnown RBP21.5■■□□□ 1.03
SHKBP1-207ENST00000595631 PTPN23Q9H3S7 1636 aa21.5■■□□□ 1.03
SHKBP1-207ENST00000595631 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
SHKBP1-207ENST00000595631 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
SHKBP1-207ENST00000595631 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
SHKBP1-207ENST00000595631 BCORL1Q5H9F3 1711 aa21.47■■□□□ 1.03
SHKBP1-207ENST00000595631 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
SHKBP1-207ENST00000595631 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
SHKBP1-207ENST00000595631 ARHGEF5Q12774 1597 aa21.47■■□□□ 1.03
SHKBP1-207ENST00000595631 ATP10AO60312 1499 aa21.45■■□□□ 1.03
SHKBP1-207ENST00000595631 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.02
SHKBP1-207ENST00000595631 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
SHKBP1-207ENST00000595631 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
SHKBP1-207ENST00000595631 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
SHKBP1-207ENST00000595631 SPAG9O60271 1321 aaKnown RBP21.43■■□□□ 1.02
SHKBP1-207ENST00000595631 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
SHKBP1-207ENST00000595631 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
SHKBP1-207ENST00000595631 ARID4BQ4LE39 1312 aaPredicted RBP21.41■■□□□ 1.02
SHKBP1-207ENST00000595631 REREQ9P2R6 1566 aa21.4■■□□□ 1.02
SHKBP1-207ENST00000595631 TCOF1Q13428 1488 aaKnown RBP21.39■■□□□ 1.02
SHKBP1-207ENST00000595631 MADDQ8WXG6 1647 aa21.39■■□□□ 1.01
SHKBP1-207ENST00000595631 DNMT1P26358 1616 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-207ENST00000595631 FER1L4A9Z1Z3 1794 aa21.36■■□□□ 1.01
SHKBP1-207ENST00000595631 RIMS1Q86UR5 1692 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-207ENST00000595631 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
SHKBP1-207ENST00000595631 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
SHKBP1-207ENST00000595631 RTEL1-TNFRSF6BF6WH68 1400 aa21.33■■□□□ 1.01
SHKBP1-207ENST00000595631 MLECQ14165 292 aa21.32■■□□□ 1
SHKBP1-207ENST00000595631 AEBP2Q6ZN18 517 aaPredicted RBP21.32■■□□□ 1
SHKBP1-207ENST00000595631 ABCC5O15440 1437 aa21.31■■□□□ 1
SHKBP1-207ENST00000595631 AGLP35573 1532 aa21.31■■□□□ 1
SHKBP1-207ENST00000595631 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
SHKBP1-207ENST00000595631 A2MP01023 1474 aa21.31■■□□□ 1
SHKBP1-207ENST00000595631 DAPK1P53355 1430 aa21.3■■□□□ 1
SHKBP1-207ENST00000595631 FAM50AQ14320 339 aaKnown RBP21.29■■□□□ 1
SHKBP1-207ENST00000595631 TSPY4P0CV99 314 aa21.27■■□□□ 1
SHKBP1-207ENST00000595631 TSPY10P0CW01 314 aa21.27■■□□□ 1
SHKBP1-207ENST00000595631 SHANK2Q9UPX8 1470 aa21.26■□□□□ 0.99
SHKBP1-207ENST00000595631 PTPRMP28827 1452 aa21.24■□□□□ 0.99
SHKBP1-207ENST00000595631 DHX29Q7Z478 1369 aaKnown RBP21.21■□□□□ 0.99
SHKBP1-207ENST00000595631 CHIC2Q9UKJ5 165 aa21.2■□□□□ 0.98
SHKBP1-207ENST00000595631 CLTCQ00610 1675 aaKnown RBP21.2■□□□□ 0.98
SHKBP1-207ENST00000595631 PTPRKQ15262 1439 aa21.18■□□□□ 0.98
SHKBP1-207ENST00000595631 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-207ENST00000595631 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
SHKBP1-207ENST00000595631 C3P01024 1663 aa21.18■□□□□ 0.98
SHKBP1-207ENST00000595631 DUOX2Q9NRD8 1548 aa21.17■□□□□ 0.98
SHKBP1-207ENST00000595631 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
SHKBP1-207ENST00000595631 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
SHKBP1-207ENST00000595631 MROH2AA6NES4 1674 aa21.15■□□□□ 0.98
SHKBP1-207ENST00000595631 RNF17Q9BXT8 1623 aaKnown RBP21.15■□□□□ 0.98
SHKBP1-207ENST00000595631 ADGRL2O95490 1459 aa21.14■□□□□ 0.98
SHKBP1-207ENST00000595631 RRP7BPQ9NSQ0 103 aa21.14■□□□□ 0.97
SHKBP1-207ENST00000595631 KIF3BO15066 747 aa21.13■□□□□ 0.97
SHKBP1-207ENST00000595631 ITGAEP38570 1179 aa21.13■□□□□ 0.97
SHKBP1-207ENST00000595631 GGT6Q6P531 493 aa21.13■□□□□ 0.97
SHKBP1-207ENST00000595631 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms