RNA–Protein interactions for RNA: ENST00000594497.1

CAPN12-203, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 526 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-203ENST00000594497 CLIP1P30622 1438 aa26.48■■□□□ 1.83
CAPN12-203ENST00000594497 SCAPERQ9BY12 1400 aa26.48■■□□□ 1.83
CAPN12-203ENST00000594497 POGZQ7Z3K3 1410 aa26.48■■□□□ 1.83
CAPN12-203ENST00000594497 PCF11O94913 1555 aaKnown RBP26.47■■□□□ 1.83
CAPN12-203ENST00000594497 EFCAB2Q5VUJ9 269 aa26.45■■□□□ 1.82
CAPN12-203ENST00000594497 YEATS2Q9ULM3 1422 aa26.45■■□□□ 1.82
CAPN12-203ENST00000594497 RIMS1Q86UR5 1692 aaKnown RBP26.44■■□□□ 1.82
CAPN12-203ENST00000594497 CCDC18Q5T9S5 1454 aa26.43■■□□□ 1.82
CAPN12-203ENST00000594497 SIGLEC1Q9BZZ2 1709 aa26.43■■□□□ 1.82
CAPN12-203ENST00000594497 CASKIN1Q8WXD9 1431 aa26.43■■□□□ 1.82
CAPN12-203ENST00000594497 ARHGAP5Q13017 1502 aa26.42■■□□□ 1.82
CAPN12-203ENST00000594497 CDC42BPBQ9Y5S2 1711 aa26.38■■□□□ 1.81
CAPN12-203ENST00000594497 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
CAPN12-203ENST00000594497 FYCO1Q9BQS8 1478 aa26.36■■□□□ 1.81
CAPN12-203ENST00000594497 PREX2Q70Z35 1606 aa26.35■■□□□ 1.81
CAPN12-203ENST00000594497 FER1L4A9Z1Z3 1794 aa26.34■■□□□ 1.81
CAPN12-203ENST00000594497 ATP10AO60312 1499 aa26.33■■□□□ 1.81
CAPN12-203ENST00000594497 KDM5CP41229 1560 aa26.33■■□□□ 1.8
CAPN12-203ENST00000594497 C9orf84Q5VXU9 1444 aa26.31■■□□□ 1.8
CAPN12-203ENST00000594497 ILDR1Q86SU0 546 aaPredicted RBP26.31■■□□□ 1.8
CAPN12-203ENST00000594497 CDC42BPAQ5VT25 1732 aa26.28■■□□□ 1.8
CAPN12-203ENST00000594497 LMTK3Q96Q04 1460 aa26.28■■□□□ 1.8
CAPN12-203ENST00000594497 MLECQ14165 292 aa26.27■■□□□ 1.8
CAPN12-203ENST00000594497 ABCC1P33527 1531 aa26.26■■□□□ 1.79
CAPN12-203ENST00000594497 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
CAPN12-203ENST00000594497 AFAP1Q8N556 730 aa26.25■■□□□ 1.79
CAPN12-203ENST00000594497 ARHGEF12Q9NZN5 1544 aa26.24■■□□□ 1.79
CAPN12-203ENST00000594497 DIP2CQ9Y2E4 1556 aa26.23■■□□□ 1.79
CAPN12-203ENST00000594497 PLPPR3Q6T4P5 718 aa26.21■■□□□ 1.79
CAPN12-203ENST00000594497 MLH3Q9UHC1 1453 aa26.2■■□□□ 1.78
CAPN12-203ENST00000594497 MYT1LQ9UL68 1186 aa26.2■■□□□ 1.78
CAPN12-203ENST00000594497 ABCA6Q8N139 1617 aa26.2■■□□□ 1.78
CAPN12-203ENST00000594497 REREQ9P2R6 1566 aa26.2■■□□□ 1.78
CAPN12-203ENST00000594497 TRAPPC8Q9Y2L5 1435 aa26.17■■□□□ 1.78
CAPN12-203ENST00000594497 KIDINS220Q9ULH0 1771 aa26.13■■□□□ 1.77
CAPN12-203ENST00000594497 SAMD9LQ8IVG5 1584 aa26.13■■□□□ 1.77
CAPN12-203ENST00000594497 GPATCH8Q9UKJ3 1502 aaKnown RBP26.11■■□□□ 1.77
CAPN12-203ENST00000594497 PREX1Q8TCU6 1659 aa26.1■■□□□ 1.77
CAPN12-203ENST00000594497 AGLP35573 1532 aa26.09■■□□□ 1.77
CAPN12-203ENST00000594497 HSPA2P54652 639 aa26.09■■□□□ 1.77
CAPN12-203ENST00000594497 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
CAPN12-203ENST00000594497 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
CAPN12-203ENST00000594497 MTUS2Q5JR59 1369 aa26.07■■□□□ 1.76
CAPN12-203ENST00000594497 CEP162Q5TB80 1403 aa26.05■■□□□ 1.76
CAPN12-203ENST00000594497 CCNB3Q8WWL7 1395 aa26.04■■□□□ 1.76
CAPN12-203ENST00000594497 CEBPAP49715 358 aaPredicted RBP26.03■■□□□ 1.76
CAPN12-203ENST00000594497 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
CAPN12-203ENST00000594497 CFDP1Q9UEE9 299 aaPredicted RBP26.02■■□□□ 1.76
CAPN12-203ENST00000594497 EHBP1L1Q8N3D4 1523 aa26.02■■□□□ 1.76
CAPN12-203ENST00000594497 C3P01024 1663 aa26.02■■□□□ 1.76
CAPN12-203ENST00000594497 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
CAPN12-203ENST00000594497 SETD1BQ9UPS6 1966 aaKnown RBP26.01■■□□□ 1.75
CAPN12-203ENST00000594497 HNRNPMP52272 730 aaKnown RBP eCLIP25.99■■□□□ 1.75
CAPN12-203ENST00000594497 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
CAPN12-203ENST00000594497 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
CAPN12-203ENST00000594497 FBXO41Q8TF61 875 aa25.98■■□□□ 1.75
CAPN12-203ENST00000594497 ATP7AQ04656 1500 aa25.98■■□□□ 1.75
CAPN12-203ENST00000594497 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
CAPN12-203ENST00000594497 INO80Q9ULG1 1556 aaPredicted RBP25.97■■□□□ 1.75
CAPN12-203ENST00000594497 SUPT6HQ7KZ85 1726 aaKnown RBP25.96■■□□□ 1.75
CAPN12-203ENST00000594497 UHRF1BP1Q6BDS2 1440 aa25.95■■□□□ 1.74
CAPN12-203ENST00000594497 CNTLNQ9NXG0 1405 aa25.93■■□□□ 1.74
CAPN12-203ENST00000594497 MROH2AA6NES4 1674 aa25.91■■□□□ 1.74
CAPN12-203ENST00000594497 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
CAPN12-203ENST00000594497 ADGBQ8N7X0 1667 aa25.89■■□□□ 1.73
CAPN12-203ENST00000594497 STRCQ7RTU9 1775 aa25.88■■□□□ 1.73
CAPN12-203ENST00000594497 A2MP01023 1474 aa25.87■■□□□ 1.73
CAPN12-203ENST00000594497 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
CAPN12-203ENST00000594497 MBD5Q9P267 1494 aa25.84■■□□□ 1.73
CAPN12-203ENST00000594497 NCOA2Q15596 1464 aa25.83■■□□□ 1.73
CAPN12-203ENST00000594497 CLTCQ00610 1675 aaKnown RBP25.83■■□□□ 1.73
CAPN12-203ENST00000594497 NPATQ14207 1427 aa25.8■■□□□ 1.72
CAPN12-203ENST00000594497 DMRT2Q9Y5R5 561 aa25.79■■□□□ 1.72
CAPN12-203ENST00000594497 RTEL1-TNFRSF6BF6WH68 1400 aa25.79■■□□□ 1.72
CAPN12-203ENST00000594497 ZMYM3Q14202 1370 aa25.78■■□□□ 1.72
CAPN12-203ENST00000594497 VPS8Q8N3P4 1428 aa25.78■■□□□ 1.72
CAPN12-203ENST00000594497 CAMSAP2Q08AD1 1489 aa25.77■■□□□ 1.72
CAPN12-203ENST00000594497 LOC105371045A0A1W2PR82 267 aa25.76■■□□□ 1.71
CAPN12-203ENST00000594497 CERKQ8TCT0 537 aa25.76■■□□□ 1.71
CAPN12-203ENST00000594497 CCDC141Q6ZP82 1450 aa25.75■■□□□ 1.71
CAPN12-203ENST00000594497 GGT6Q6P531 493 aa25.74■■□□□ 1.71
CAPN12-203ENST00000594497 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
CAPN12-203ENST00000594497 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
CAPN12-203ENST00000594497 PTPRTO14522 1441 aa25.71■■□□□ 1.71
CAPN12-203ENST00000594497 MYO3AQ8NEV4 1616 aa25.7■■□□□ 1.71
CAPN12-203ENST00000594497 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
CAPN12-203ENST00000594497 ARHGEF5Q12774 1597 aa25.69■■□□□ 1.7
CAPN12-203ENST00000594497 ZNF142P52746 1687 aaPredicted RBP25.69■■□□□ 1.7
CAPN12-203ENST00000594497 RSPH4AQ5TD94 716 aa25.69■■□□□ 1.7
CAPN12-203ENST00000594497 NCOA1Q15788 1441 aa25.69■■□□□ 1.7
CAPN12-203ENST00000594497 CAMSAP1Q5T5Y3 1602 aa25.67■■□□□ 1.7
CAPN12-203ENST00000594497 PTPRKQ15262 1439 aa25.67■■□□□ 1.7
CAPN12-203ENST00000594497 MAP3K1Q13233 1512 aa25.67■■□□□ 1.7
CAPN12-203ENST00000594497 CEP170BQ9Y4F5 1589 aaPredicted RBP25.63■■□□□ 1.69
CAPN12-203ENST00000594497 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
CAPN12-203ENST00000594497 KIF3BO15066 747 aa25.6■■□□□ 1.69
CAPN12-203ENST00000594497 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
CAPN12-203ENST00000594497 TSPY4P0CV99 314 aa25.59■■□□□ 1.69
CAPN12-203ENST00000594497 TSPY10P0CW01 314 aa25.59■■□□□ 1.69
CAPN12-203ENST00000594497 MAST1Q9Y2H9 1570 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms