RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PTPRKQ15262 1439 aa31.25■■■□□ 2.59
PNKP-203ENST00000593946 ZNF644Q9H582 1327 aaPredicted RBP31.24■■■□□ 2.59
PNKP-203ENST00000593946 ABCA9Q8IUA7 1624 aa31.23■■■□□ 2.59
PNKP-203ENST00000593946 MAPKBP1O60336 1514 aa31.19■■■□□ 2.58
PNKP-203ENST00000593946 SAMD9LQ8IVG5 1584 aa31.18■■■□□ 2.58
PNKP-203ENST00000593946 ARHGAP5Q13017 1502 aa31.18■■■□□ 2.58
PNKP-203ENST00000593946 DAPK1P53355 1430 aa31.18■■■□□ 2.58
PNKP-203ENST00000593946 CROCC2H7BZ55 1655 aa31.16■■■□□ 2.58
PNKP-203ENST00000593946 PLCH2O75038 1416 aa31.16■■■□□ 2.58
PNKP-203ENST00000593946 ARAP3Q8WWN8 1544 aa31.16■■■□□ 2.58
PNKP-203ENST00000593946 ZNF777Q9ULD5 760 aaPredicted RBP31.15■■■□□ 2.58
PNKP-203ENST00000593946 ABCC5O15440 1437 aa31.14■■■□□ 2.58
PNKP-203ENST00000593946 SETD5Q9C0A6 1442 aa31.13■■■□□ 2.57
PNKP-203ENST00000593946 HFM1A2PYH4 1435 aa31.1■■■□□ 2.57
PNKP-203ENST00000593946 ARHGEF5Q12774 1597 aa31.1■■■□□ 2.57
PNKP-203ENST00000593946 AKNAQ7Z591 1439 aa31.09■■■□□ 2.57
PNKP-203ENST00000593946 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
PNKP-203ENST00000593946 GCC2Q8IWJ2 1684 aa31.08■■■□□ 2.57
PNKP-203ENST00000593946 HRCP23327 699 aa31.07■■■□□ 2.56
PNKP-203ENST00000593946 ADGBQ8N7X0 1667 aa31.06■■■□□ 2.56
PNKP-203ENST00000593946 MBD5Q9P267 1494 aa31.05■■■□□ 2.56
PNKP-203ENST00000593946 PLEKHH2Q8IVE3 1493 aa31.04■■■□□ 2.56
PNKP-203ENST00000593946 NAIPQ13075 1403 aa31.04■■■□□ 2.56
PNKP-203ENST00000593946 ROCK1Q13464 1354 aa31.03■■■□□ 2.56
PNKP-203ENST00000593946 SYCP2Q9BX26 1530 aa31.03■■■□□ 2.56
PNKP-203ENST00000593946 SHANK2Q9UPX8 1470 aa31.03■■■□□ 2.56
PNKP-203ENST00000593946 CCER1Q8TC90 406 aaPredicted RBP31.02■■■□□ 2.56
PNKP-203ENST00000593946 KIAA1107Q9UPP5 1409 aa31.02■■■□□ 2.56
PNKP-203ENST00000593946 EFCAB2Q5VUJ9 269 aa31.01■■■□□ 2.55
PNKP-203ENST00000593946 CHIC2Q9UKJ5 165 aa31.01■■■□□ 2.55
PNKP-203ENST00000593946 ABCC1P33527 1531 aa31■■■□□ 2.55
PNKP-203ENST00000593946 ADGRL2O95490 1459 aa30.98■■■□□ 2.55
PNKP-203ENST00000593946 CCDC141Q6ZP82 1450 aa30.98■■■□□ 2.55
PNKP-203ENST00000593946 HNRNPMP52272 730 aaKnown RBP eCLIP30.96■■■□□ 2.55
PNKP-203ENST00000593946 FANCAO15360 1455 aa30.96■■■□□ 2.55
PNKP-203ENST00000593946 GLI2P10070 1586 aa30.95■■■□□ 2.54
PNKP-203ENST00000593946 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
PNKP-203ENST00000593946 RSPH4AQ5TD94 716 aa30.93■■■□□ 2.54
PNKP-203ENST00000593946 RRP7BPQ9NSQ0 103 aa30.93■■■□□ 2.54
PNKP-203ENST00000593946 C9orf84Q5VXU9 1444 aa30.92■■■□□ 2.54
PNKP-203ENST00000593946 CD109Q6YHK3 1445 aa30.92■■■□□ 2.54
PNKP-203ENST00000593946 MAP3K4Q9Y6R4 1608 aa30.92■■■□□ 2.54
PNKP-203ENST00000593946 NCOA1Q15788 1441 aa30.91■■■□□ 2.54
PNKP-203ENST00000593946 DHX57Q6P158 1386 aaKnown RBP30.91■■■□□ 2.54
PNKP-203ENST00000593946 CFAP74Q9C0B2 1584 aa30.9■■■□□ 2.54
PNKP-203ENST00000593946 MAST1Q9Y2H9 1570 aa30.9■■■□□ 2.54
PNKP-203ENST00000593946 DIP2BQ9P265 1576 aa30.9■■■□□ 2.54
PNKP-203ENST00000593946 KDM6BO15054 1643 aa30.88■■■□□ 2.53
PNKP-203ENST00000593946 ANKRD30AQ9BXX3 1397 aa30.86■■■□□ 2.53
PNKP-203ENST00000593946 TSPY4P0CV99 314 aa30.86■■■□□ 2.53
PNKP-203ENST00000593946 TSPY10P0CW01 314 aa30.86■■■□□ 2.53
PNKP-203ENST00000593946 ZEB1P37275 1124 aaPredicted RBP30.84■■■□□ 2.53
PNKP-203ENST00000593946 ADGRL1O94910 1474 aa30.81■■■□□ 2.52
PNKP-203ENST00000593946 TRAPPC8Q9Y2L5 1435 aa30.8■■■□□ 2.52
PNKP-203ENST00000593946 PLXNC1O60486 1568 aa30.79■■■□□ 2.52
PNKP-203ENST00000593946 CLSPNQ9HAW4 1339 aa30.76■■■□□ 2.51
PNKP-203ENST00000593946 KIF13AQ9H1H9 1805 aa30.76■■■□□ 2.51
PNKP-203ENST00000593946 NEO1Q92859 1461 aa30.76■■■□□ 2.51
PNKP-203ENST00000593946 SCAPERQ9BY12 1400 aa30.75■■■□□ 2.51
PNKP-203ENST00000593946 KIF15Q9NS87 1388 aa30.73■■■□□ 2.51
PNKP-203ENST00000593946 FAM69CQ0P6D2 419 aa30.72■■■□□ 2.51
PNKP-203ENST00000593946 ZFYVE16Q7Z3T8 1539 aa30.7■■■□□ 2.51
PNKP-203ENST00000593946 ANKRD50Q9ULJ7 1429 aa30.7■■■□□ 2.5
PNKP-203ENST00000593946 ACIN1Q9UKV3 1341 aaKnown RBP30.7■■■□□ 2.5
PNKP-203ENST00000593946 PPRC1Q5VV67 1664 aaKnown RBP30.7■■■□□ 2.5
PNKP-203ENST00000593946 INO80Q9ULG1 1556 aaPredicted RBP30.7■■■□□ 2.5
PNKP-203ENST00000593946 RTEL1-TNFRSF6BF6WH68 1400 aa30.69■■■□□ 2.5
PNKP-203ENST00000593946 TSPOAP1O95153 1857 aa30.67■■■□□ 2.5
PNKP-203ENST00000593946 AFAP1Q8N556 730 aa30.67■■■□□ 2.5
PNKP-203ENST00000593946 ZNF518AQ6AHZ1 1483 aa30.66■■■□□ 2.5
PNKP-203ENST00000593946 DNAJC5Q9H3Z4 198 aa30.64■■■□□ 2.5
PNKP-203ENST00000593946 SPAG9O60271 1321 aaKnown RBP30.64■■■□□ 2.5
PNKP-203ENST00000593946 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
PNKP-203ENST00000593946 KDM5CP41229 1560 aa30.64■■■□□ 2.49
PNKP-203ENST00000593946 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
PNKP-203ENST00000593946 DUOX2Q9NRD8 1548 aa30.62■■■□□ 2.49
PNKP-203ENST00000593946 KIDINS220Q9ULH0 1771 aa30.59■■■□□ 2.49
PNKP-203ENST00000593946 TEX14Q8IWB6 1497 aa30.58■■■□□ 2.49
PNKP-203ENST00000593946 RICTORQ6R327 1708 aa30.58■■■□□ 2.49
PNKP-203ENST00000593946 TRIM52Q96A61 297 aa30.57■■■□□ 2.48
PNKP-203ENST00000593946 DENND4BO75064 1496 aaPredicted RBP30.56■■■□□ 2.48
PNKP-203ENST00000593946 ERBINQ96RT1 1412 aa30.54■■■□□ 2.48
PNKP-203ENST00000593946 HECW2Q9P2P5 1572 aa30.53■■■□□ 2.48
PNKP-203ENST00000593946 KDM5DQ9BY66 1539 aa30.52■■■□□ 2.48
PNKP-203ENST00000593946 MLH3Q9UHC1 1453 aa30.51■■■□□ 2.48
PNKP-203ENST00000593946 UNC13BO14795 1591 aa30.51■■■□□ 2.47
PNKP-203ENST00000593946 PZPP20742 1482 aa30.51■■■□□ 2.47
PNKP-203ENST00000593946 MPHOSPH9Q99550 1183 aa30.48■■■□□ 2.47
PNKP-203ENST00000593946 FRMPD1Q5SYB0 1578 aa30.48■■■□□ 2.47
PNKP-203ENST00000593946 RAPGEF3O95398 923 aa30.43■■■□□ 2.46
PNKP-203ENST00000593946 EIF2AK4Q9P2K8 1649 aaKnown RBP30.43■■■□□ 2.46
PNKP-203ENST00000593946 MAGI2Q86UL8 1455 aa30.42■■■□□ 2.46
PNKP-203ENST00000593946 ABCA6Q8N139 1617 aa30.42■■■□□ 2.46
PNKP-203ENST00000593946 NUP155O75694 1391 aa30.41■■■□□ 2.46
PNKP-203ENST00000593946 ZMYM4Q5VZL5 1548 aa30.4■■■□□ 2.46
PNKP-203ENST00000593946 SLC4A1APQ9BWU0 796 aaKnown RBP30.39■■■□□ 2.46
PNKP-203ENST00000593946 MYT1LQ9UL68 1186 aa30.39■■■□□ 2.46
PNKP-203ENST00000593946 DEPDC5O75140 1603 aa30.39■■■□□ 2.46
PNKP-203ENST00000593946 DHX29Q7Z478 1369 aaKnown RBP30.38■■■□□ 2.45
PNKP-203ENST00000593946 IQGAP3Q86VI3 1631 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms