RNA–Protein interactions for RNA: ENST00000593103.1

RHBDF2-218, Transcript of rhomboid 5 homolog 2, human

TSL 5

Gene RHBDF2, Length 562 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHBDF2-218	ENST00000593103	TRO	Q12816	1431 aa	Predicted RBP	32.05	■■■□□ 2.72
RHBDF2-218	ENST00000593103	POGZ	Q7Z3K3	1410 aa		32.05	■■■□□ 2.72
RHBDF2-218	ENST00000593103	SCAPER	Q9BY12	1400 aa		32.04	■■■□□ 2.72
RHBDF2-218	ENST00000593103	RIMS1	Q86UR5	1692 aa	Known RBP	32.03	■■■□□ 2.72
RHBDF2-218	ENST00000593103	MAGI2	Q86UL8	1455 aa		31.99	■■■□□ 2.71
RHBDF2-218	ENST00000593103	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.99	■■■□□ 2.71
RHBDF2-218	ENST00000593103	CASKIN1	Q8WXD9	1431 aa		31.97	■■■□□ 2.71
RHBDF2-218	ENST00000593103	CDC42BPB	Q9Y5S2	1711 aa		31.96	■■■□□ 2.71
RHBDF2-218	ENST00000593103	CLIP1	P30622	1438 aa		31.93	■■■□□ 2.7
RHBDF2-218	ENST00000593103	EFCAB2	Q5VUJ9	269 aa		31.93	■■■□□ 2.7
RHBDF2-218	ENST00000593103	ARHGAP5	Q13017	1502 aa		31.93	■■■□□ 2.7
RHBDF2-218	ENST00000593103	CCDC18	Q5T9S5	1454 aa		31.91	■■■□□ 2.7
RHBDF2-218	ENST00000593103	ILDR1	Q86SU0	546 aa	Predicted RBP	31.9	■■■□□ 2.7
RHBDF2-218	ENST00000593103	PREX2	Q70Z35	1606 aa		31.89	■■■□□ 2.7
RHBDF2-218	ENST00000593103	FER1L4	A9Z1Z3	1794 aa		31.87	■■■□□ 2.69
RHBDF2-218	ENST00000593103	KDM5C	P41229	1560 aa		31.87	■■■□□ 2.69
RHBDF2-218	ENST00000593103	LMTK3	Q96Q04	1460 aa		31.85	■■■□□ 2.69
RHBDF2-218	ENST00000593103	FYCO1	Q9BQS8	1478 aa		31.85	■■■□□ 2.69
RHBDF2-218	ENST00000593103	ATP10A	O60312	1499 aa		31.84	■■■□□ 2.69
RHBDF2-218	ENST00000593103	ZNF518A	Q6AHZ1	1483 aa		31.84	■■■□□ 2.69
RHBDF2-218	ENST00000593103	CDC42BPA	Q5VT25	1732 aa		31.83	■■■□□ 2.69
RHBDF2-218	ENST00000593103	C9orf84	Q5VXU9	1444 aa		31.82	■■■□□ 2.68
RHBDF2-218	ENST00000593103	ABCC1	P33527	1531 aa		31.8	■■■□□ 2.68
RHBDF2-218	ENST00000593103	MLEC	Q14165	292 aa		31.79	■■■□□ 2.68
RHBDF2-218	ENST00000593103	ITSN2	Q9NZM3	1697 aa		31.79	■■■□□ 2.68
RHBDF2-218	ENST00000593103	ARHGEF12	Q9NZN5	1544 aa		31.79	■■■□□ 2.68
RHBDF2-218	ENST00000593103	AFAP1	Q8N556	730 aa		31.78	■■■□□ 2.68
RHBDF2-218	ENST00000593103	DIP2C	Q9Y2E4	1556 aa		31.77	■■■□□ 2.68
RHBDF2-218	ENST00000593103	ABCA6	Q8N139	1617 aa		31.75	■■■□□ 2.67
RHBDF2-218	ENST00000593103	PLPPR3	Q6T4P5	718 aa		31.73	■■■□□ 2.67
RHBDF2-218	ENST00000593103	TRAPPC8	Q9Y2L5	1435 aa		31.73	■■■□□ 2.67
RHBDF2-218	ENST00000593103	RERE	Q9P2R6	1566 aa		31.68	■■■□□ 2.66
RHBDF2-218	ENST00000593103	MLH3	Q9UHC1	1453 aa		31.68	■■■□□ 2.66
RHBDF2-218	ENST00000593103	SAMD9L	Q8IVG5	1584 aa		31.66	■■■□□ 2.66
RHBDF2-218	ENST00000593103	KIDINS220	Q9ULH0	1771 aa		31.66	■■■□□ 2.66
RHBDF2-218	ENST00000593103	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.63	■■■□□ 2.65
RHBDF2-218	ENST00000593103	HSPA2	P54652	639 aa		31.62	■■■□□ 2.65
RHBDF2-218	ENST00000593103	MYT1L	Q9UL68	1186 aa		31.6	■■■□□ 2.65
RHBDF2-218	ENST00000593103	SYCP2	Q9BX26	1530 aa		31.59	■■■□□ 2.65
RHBDF2-218	ENST00000593103	PREX1	Q8TCU6	1659 aa		31.57	■■■□□ 2.64
RHBDF2-218	ENST00000593103	AGL	P35573	1532 aa		31.56	■■■□□ 2.64
RHBDF2-218	ENST00000593103	CEBPA	P49715	358 aa	Predicted RBP	31.55	■■■□□ 2.64
RHBDF2-218	ENST00000593103	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.53	■■■□□ 2.64
RHBDF2-218	ENST00000593103	C3	P01024	1663 aa		31.51	■■■□□ 2.63
RHBDF2-218	ENST00000593103	CEP162	Q5TB80	1403 aa		31.5	■■■□□ 2.63
RHBDF2-218	ENST00000593103	TIAM1	Q13009	1591 aa		31.47	■■■□□ 2.63
RHBDF2-218	ENST00000593103	MTUS2	Q5JR59	1369 aa		31.47	■■■□□ 2.63
RHBDF2-218	ENST00000593103	CCNB3	Q8WWL7	1395 aa		31.45	■■■□□ 2.63
RHBDF2-218	ENST00000593103	EHBP1L1	Q8N3D4	1523 aa		31.45	■■■□□ 2.63
RHBDF2-218	ENST00000593103	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.45	■■■□□ 2.63	3e-6	■■■■■ 30.3
RHBDF2-218	ENST00000593103	INO80	Q9ULG1	1556 aa	Predicted RBP	31.45	■■■□□ 2.63
RHBDF2-218	ENST00000593103	SETD1B	Q9UPS6	1966 aa	Known RBP	31.43	■■■□□ 2.62
RHBDF2-218	ENST00000593103	KIAA1107	Q9UPP5	1409 aa		31.43	■■■□□ 2.62
RHBDF2-218	ENST00000593103	ATP7A	Q04656	1500 aa		31.43	■■■□□ 2.62
RHBDF2-218	ENST00000593103	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.42	■■■□□ 2.62
RHBDF2-218	ENST00000593103	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.42	■■■□□ 2.62
RHBDF2-218	ENST00000593103	PLEKHH2	Q8IVE3	1493 aa		31.4	■■■□□ 2.62
RHBDF2-218	ENST00000593103	FBXO41	Q8TF61	875 aa		31.4	■■■□□ 2.62
RHBDF2-218	ENST00000593103	SPAG9	O60271	1321 aa	Known RBP	31.39	■■■□□ 2.62
RHBDF2-218	ENST00000593103	STRC	Q7RTU9	1775 aa		31.38	■■■□□ 2.61
RHBDF2-218	ENST00000593103	PLXNC1	O60486	1568 aa		31.38	■■■□□ 2.61
RHBDF2-218	ENST00000593103	UHRF1BP1	Q6BDS2	1440 aa		31.35	■■■□□ 2.61
RHBDF2-218	ENST00000593103	ZNF644	Q9H582	1327 aa	Predicted RBP	31.34	■■■□□ 2.61
RHBDF2-218	ENST00000593103	MROH2A	A6NES4	1674 aa		31.32	■■■□□ 2.6
RHBDF2-218	ENST00000593103	MBD5	Q9P267	1494 aa		31.31	■■■□□ 2.6
RHBDF2-218	ENST00000593103	CNTLN	Q9NXG0	1405 aa		31.3	■■■□□ 2.6
RHBDF2-218	ENST00000593103	A2M	P01023	1474 aa		31.29	■■■□□ 2.6
RHBDF2-218	ENST00000593103	ADGB	Q8N7X0	1667 aa		31.29	■■■□□ 2.6
RHBDF2-218	ENST00000593103	ESF1	Q9H501	851 aa	Known RBP	31.27	■■■□□ 2.6
RHBDF2-218	ENST00000593103	CLTC	Q00610	1675 aa	Known RBP	31.27	■■■□□ 2.6
RHBDF2-218	ENST00000593103	NCOA2	Q15596	1464 aa		31.26	■■■□□ 2.59
RHBDF2-218	ENST00000593103	LOC105371045	A0A1W2PR82	267 aa		31.22	■■■□□ 2.59
RHBDF2-218	ENST00000593103	CAMSAP2	Q08AD1	1489 aa		31.19	■■■□□ 2.58
RHBDF2-218	ENST00000593103	ZMYM3	Q14202	1370 aa		31.18	■■■□□ 2.58
RHBDF2-218	ENST00000593103	VPS8	Q8N3P4	1428 aa		31.17	■■■□□ 2.58
RHBDF2-218	ENST00000593103	NPAT	Q14207	1427 aa		31.16	■■■□□ 2.58
RHBDF2-218	ENST00000593103	CERK	Q8TCT0	537 aa		31.16	■■■□□ 2.58
RHBDF2-218	ENST00000593103	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.15	■■■□□ 2.58
RHBDF2-218	ENST00000593103	CCDC141	Q6ZP82	1450 aa		31.14	■■■□□ 2.57
RHBDF2-218	ENST00000593103	MYO3A	Q8NEV4	1616 aa		31.12	■■■□□ 2.57
RHBDF2-218	ENST00000593103	GGT6	Q6P531	493 aa		31.11	■■■□□ 2.57
RHBDF2-218	ENST00000593103	LRRC9	Q6ZRR7	1453 aa		31.11	■■■□□ 2.57
RHBDF2-218	ENST00000593103	NCOA1	Q15788	1441 aa		31.1	■■■□□ 2.57
RHBDF2-218	ENST00000593103	ZNF142	P52746	1687 aa	Predicted RBP	31.09	■■■□□ 2.57
RHBDF2-218	ENST00000593103	PTPRK	Q15262	1439 aa		31.09	■■■□□ 2.57
RHBDF2-218	ENST00000593103	PTPRT	O14522	1441 aa		31.08	■■■□□ 2.57
RHBDF2-218	ENST00000593103	DMRT2	Q9Y5R5	561 aa		31.08	■■■□□ 2.57
RHBDF2-218	ENST00000593103	CAMSAP1	Q5T5Y3	1602 aa		31.08	■■■□□ 2.57
RHBDF2-218	ENST00000593103	ARHGEF5	Q12774	1597 aa		31.07	■■■□□ 2.56
RHBDF2-218	ENST00000593103	DHX29	Q7Z478	1369 aa	Known RBP	31.06	■■■□□ 2.56
RHBDF2-218	ENST00000593103	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.01	■■■□□ 2.56
RHBDF2-218	ENST00000593103	MAP3K1	Q13233	1512 aa		31	■■■□□ 2.55
RHBDF2-218	ENST00000593103	KANK4	Q5T7N3	995 aa	Predicted RBP	31	■■■□□ 2.55
RHBDF2-218	ENST00000593103	PPP6R1	Q9UPN7	881 aa		30.98	■■■□□ 2.55
RHBDF2-218	ENST00000593103	LTBP4	Q8N2S1	1624 aa		30.98	■■■□□ 2.55
RHBDF2-218	ENST00000593103	RSPH4A	Q5TD94	716 aa		30.95	■■■□□ 2.55
RHBDF2-218	ENST00000593103	KIF3B	O15066	747 aa		30.94	■■■□□ 2.54
RHBDF2-218	ENST00000593103	KDM5D	Q9BY66	1539 aa		30.93	■■■□□ 2.54
RHBDF2-218	ENST00000593103	MAST1	Q9Y2H9	1570 aa		30.93	■■■□□ 2.54
RHBDF2-218	ENST00000593103	PLA2R1	Q13018	1463 aa		30.91	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms