RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 SCAPERQ9BY12 1400 aa27.11■■□□□ 1.93
AP3D1-212ENST00000592488 POGZQ7Z3K3 1410 aa27.09■■□□□ 1.93
AP3D1-212ENST00000592488 PREX2Q70Z35 1606 aa27.06■■□□□ 1.92
AP3D1-212ENST00000592488 CDC42BPBQ9Y5S2 1711 aa27.04■■□□□ 1.92
AP3D1-212ENST00000592488 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
AP3D1-212ENST00000592488 ZFYVE16Q7Z3T8 1539 aa27.04■■□□□ 1.92
AP3D1-212ENST00000592488 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
AP3D1-212ENST00000592488 YEATS2Q9ULM3 1422 aa26.99■■□□□ 1.91
AP3D1-212ENST00000592488 ZNF518AQ6AHZ1 1483 aa26.99■■□□□ 1.91
AP3D1-212ENST00000592488 CDC42BPAQ5VT25 1732 aa26.99■■□□□ 1.91
AP3D1-212ENST00000592488 ARID4BQ4LE39 1312 aaPredicted RBP26.98■■□□□ 1.91
AP3D1-212ENST00000592488 MTUS2Q5JR59 1369 aa26.97■■□□□ 1.91
AP3D1-212ENST00000592488 ADAMTSL3P82987 1691 aa26.96■■□□□ 1.91
AP3D1-212ENST00000592488 BCORL1Q5H9F3 1711 aa26.96■■□□□ 1.91
AP3D1-212ENST00000592488 KDM5CP41229 1560 aa26.94■■□□□ 1.9
AP3D1-212ENST00000592488 ABCC1P33527 1531 aa26.94■■□□□ 1.9
AP3D1-212ENST00000592488 EHBP1L1Q8N3D4 1523 aa26.92■■□□□ 1.9
AP3D1-212ENST00000592488 GPATCH8Q9UKJ3 1502 aaKnown RBP26.91■■□□□ 1.9
AP3D1-212ENST00000592488 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.9
AP3D1-212ENST00000592488 AFAP1Q8N556 730 aa26.89■■□□□ 1.9
AP3D1-212ENST00000592488 MADDQ8WXG6 1647 aa26.88■■□□□ 1.89
AP3D1-212ENST00000592488 ARHGEF12Q9NZN5 1544 aa26.88■■□□□ 1.89
AP3D1-212ENST00000592488 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
AP3D1-212ENST00000592488 HECW2Q9P2P5 1572 aa26.88■■□□□ 1.89
AP3D1-212ENST00000592488 SIGLEC1Q9BZZ2 1709 aa26.87■■□□□ 1.89
AP3D1-212ENST00000592488 ATP10AO60312 1499 aa26.87■■□□□ 1.89
AP3D1-212ENST00000592488 CCNB3Q8WWL7 1395 aa26.87■■□□□ 1.89
AP3D1-212ENST00000592488 C9orf84Q5VXU9 1444 aa26.86■■□□□ 1.89
AP3D1-212ENST00000592488 PTPRMP28827 1452 aa26.86■■□□□ 1.89
AP3D1-212ENST00000592488 SAMD9LQ8IVG5 1584 aa26.85■■□□□ 1.89
AP3D1-212ENST00000592488 TRAPPC8Q9Y2L5 1435 aa26.85■■□□□ 1.89
AP3D1-212ENST00000592488 ZNF777Q9ULD5 760 aaPredicted RBP26.84■■□□□ 1.89
AP3D1-212ENST00000592488 MLH3Q9UHC1 1453 aa26.83■■□□□ 1.89
AP3D1-212ENST00000592488 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
AP3D1-212ENST00000592488 TIAM1Q13009 1591 aa26.82■■□□□ 1.88
AP3D1-212ENST00000592488 MYT1LQ9UL68 1186 aa26.81■■□□□ 1.88
AP3D1-212ENST00000592488 SYCP2Q9BX26 1530 aa26.8■■□□□ 1.88
AP3D1-212ENST00000592488 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
AP3D1-212ENST00000592488 PLEKHH2Q8IVE3 1493 aa26.79■■□□□ 1.88
AP3D1-212ENST00000592488 ABCA6Q8N139 1617 aa26.78■■□□□ 1.88
AP3D1-212ENST00000592488 RIMS1Q86UR5 1692 aaKnown RBP26.78■■□□□ 1.88
AP3D1-212ENST00000592488 KIAA1107Q9UPP5 1409 aa26.76■■□□□ 1.87
AP3D1-212ENST00000592488 SUPT6HQ7KZ85 1726 aaKnown RBP26.76■■□□□ 1.87
AP3D1-212ENST00000592488 REREQ9P2R6 1566 aa26.75■■□□□ 1.87
AP3D1-212ENST00000592488 MLECQ14165 292 aa26.74■■□□□ 1.87
AP3D1-212ENST00000592488 NCOA2Q15596 1464 aa26.74■■□□□ 1.87
AP3D1-212ENST00000592488 KIDINS220Q9ULH0 1771 aa26.73■■□□□ 1.87
AP3D1-212ENST00000592488 HNRNPMP52272 730 aaKnown RBP eCLIP26.72■■□□□ 1.87
AP3D1-212ENST00000592488 FER1L4A9Z1Z3 1794 aa26.71■■□□□ 1.87
AP3D1-212ENST00000592488 LRRC9Q6ZRR7 1453 aa26.69■■□□□ 1.86
AP3D1-212ENST00000592488 MAP3K1Q13233 1512 aa26.69■■□□□ 1.86
AP3D1-212ENST00000592488 SPAG9O60271 1321 aaKnown RBP26.68■■□□□ 1.86
AP3D1-212ENST00000592488 AGLP35573 1532 aa26.66■■□□□ 1.86
AP3D1-212ENST00000592488 ZNF644Q9H582 1327 aaPredicted RBP26.65■■□□□ 1.86
AP3D1-212ENST00000592488 ATP7AQ04656 1500 aa26.65■■□□□ 1.86
AP3D1-212ENST00000592488 INO80Q9ULG1 1556 aaPredicted RBP26.65■■□□□ 1.86
AP3D1-212ENST00000592488 MBD5Q9P267 1494 aa26.62■■□□□ 1.85
AP3D1-212ENST00000592488 CAMSAP2Q08AD1 1489 aa26.6■■□□□ 1.85
AP3D1-212ENST00000592488 PLPPR3Q6T4P5 718 aa26.59■■□□□ 1.85
AP3D1-212ENST00000592488 KANK4Q5T7N3 995 aaPredicted RBP26.57■■□□□ 1.84
AP3D1-212ENST00000592488 LMTK3Q96Q04 1460 aa26.55■■□□□ 1.84
AP3D1-212ENST00000592488 CCDC141Q6ZP82 1450 aa26.54■■□□□ 1.84
AP3D1-212ENST00000592488 PLXNC1O60486 1568 aa26.54■■□□□ 1.84
AP3D1-212ENST00000592488 APLP2Q06481 763 aa26.53■■□□□ 1.84
AP3D1-212ENST00000592488 A2MP01023 1474 aa26.53■■□□□ 1.84
AP3D1-212ENST00000592488 RTEL1-TNFRSF6BF6WH68 1400 aa26.52■■□□□ 1.84
AP3D1-212ENST00000592488 ADGBQ8N7X0 1667 aa26.51■■□□□ 1.83
AP3D1-212ENST00000592488 ESF1Q9H501 851 aaKnown RBP26.5■■□□□ 1.83
AP3D1-212ENST00000592488 ARHGEF5Q12774 1597 aa26.5■■□□□ 1.83
AP3D1-212ENST00000592488 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
AP3D1-212ENST00000592488 MYOM3Q5VTT5 1437 aa26.48■■□□□ 1.83
AP3D1-212ENST00000592488 CEBPAP49715 358 aaPredicted RBP26.47■■□□□ 1.83
AP3D1-212ENST00000592488 CNTLNQ9NXG0 1405 aa26.47■■□□□ 1.83
AP3D1-212ENST00000592488 MIA2Q96PC5 1412 aa26.46■■□□□ 1.83
AP3D1-212ENST00000592488 C3P01024 1663 aa26.44■■□□□ 1.82
AP3D1-212ENST00000592488 PREX1Q8TCU6 1659 aa26.43■■□□□ 1.82
AP3D1-212ENST00000592488 DHX29Q7Z478 1369 aaKnown RBP26.4■■□□□ 1.82
AP3D1-212ENST00000592488 MROH2AA6NES4 1674 aa26.4■■□□□ 1.82
AP3D1-212ENST00000592488 TSPY4P0CV99 314 aa26.39■■□□□ 1.82
AP3D1-212ENST00000592488 TSPY10P0CW01 314 aa26.39■■□□□ 1.82
AP3D1-212ENST00000592488 HSPA2P54652 639 aa26.38■■□□□ 1.81
AP3D1-212ENST00000592488 SETD1BQ9UPS6 1966 aaKnown RBP26.37■■□□□ 1.81
AP3D1-212ENST00000592488 UHRF1BP1Q6BDS2 1440 aa26.35■■□□□ 1.81
AP3D1-212ENST00000592488 GGT6Q6P531 493 aa26.35■■□□□ 1.81
AP3D1-212ENST00000592488 MAST1Q9Y2H9 1570 aa26.35■■□□□ 1.81
AP3D1-212ENST00000592488 CLTCQ00610 1675 aaKnown RBP26.34■■□□□ 1.81
AP3D1-212ENST00000592488 PPP6R1Q9UPN7 881 aa26.32■■□□□ 1.8
AP3D1-212ENST00000592488 ZMYM3Q14202 1370 aa26.32■■□□□ 1.8
AP3D1-212ENST00000592488 PTPN23Q9H3S7 1636 aa26.31■■□□□ 1.8
AP3D1-212ENST00000592488 NPATQ14207 1427 aa26.3■■□□□ 1.8
AP3D1-212ENST00000592488 FGD6Q6ZV73 1430 aa26.3■■□□□ 1.8
AP3D1-212ENST00000592488 KIF3BO15066 747 aa26.28■■□□□ 1.8
AP3D1-212ENST00000592488 FAM135AQ9P2D6 1515 aa26.25■■□□□ 1.79
AP3D1-212ENST00000592488 TCOF1Q13428 1488 aaKnown RBP26.25■■□□□ 1.79
AP3D1-212ENST00000592488 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
AP3D1-212ENST00000592488 CROCC2H7BZ55 1655 aa26.24■■□□□ 1.79
AP3D1-212ENST00000592488 KDM5DQ9BY66 1539 aa26.22■■□□□ 1.79
AP3D1-212ENST00000592488 ABCC5O15440 1437 aa26.22■■□□□ 1.79
AP3D1-212ENST00000592488 PTPRKQ15262 1439 aa26.21■■□□□ 1.79
AP3D1-212ENST00000592488 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms