RNA–Protein interactions for RNA: ENST00000592442.1

LAMA3-213, Transcript of laminin subunit alpha 3, humanhuman

TSL 3

Gene LAMA3, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-213ENST00000592442 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
LAMA3-213ENST00000592442 SCUBE2Q9NQ36 999 aa9.08□□□□□ -0.96
LAMA3-213ENST00000592442 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.08□□□□□ -0.96
LAMA3-213ENST00000592442 POTEB2H3BUK9 544 aa9.07□□□□□ -0.96
LAMA3-213ENST00000592442 MAMSTRQ6ZN01 415 aa9.06□□□□□ -0.96
LAMA3-213ENST00000592442 TMEM121BQ9BXQ6 578 aaPredicted RBP9.06□□□□□ -0.96
LAMA3-213ENST00000592442 CADPS2Q86UW7 1296 aa9.05□□□□□ -0.96
LAMA3-213ENST00000592442 TMC2Q8TDI7 906 aa9.05□□□□□ -0.96
LAMA3-213ENST00000592442 LHX8Q68G74 356 aa9.04□□□□□ -0.96
LAMA3-213ENST00000592442 PDE4AP27815 886 aa9.02□□□□□ -0.97
LAMA3-213ENST00000592442 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
LAMA3-213ENST00000592442 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
LAMA3-213ENST00000592442 LARP6Q9BRS8 491 aaKnown RBP9.01□□□□□ -0.97
LAMA3-213ENST00000592442 SLAIN1Q8ND83 568 aa9□□□□□ -0.97
LAMA3-213ENST00000592442 SCRIBQ14160 1630 aa9□□□□□ -0.97
LAMA3-213ENST00000592442 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
LAMA3-213ENST00000592442 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
LAMA3-213ENST00000592442 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
LAMA3-213ENST00000592442 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
LAMA3-213ENST00000592442 DDX27Q96GQ7 796 aaKnown RBP8.97□□□□□ -0.97
LAMA3-213ENST00000592442 CRISPLD2Q9H0B8 497 aa8.97□□□□□ -0.97
LAMA3-213ENST00000592442 TMEM92Q6UXU6 159 aa8.96□□□□□ -0.98
LAMA3-213ENST00000592442 PPP1R15BQ5SWA1 713 aa8.94□□□□□ -0.98
LAMA3-213ENST00000592442 KDM2AQ9Y2K7 1162 aa8.94□□□□□ -0.98
LAMA3-213ENST00000592442 DSG2Q14126 1118 aa8.93□□□□□ -0.98
LAMA3-213ENST00000592442 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
LAMA3-213ENST00000592442 PLPP6Q8IY26 295 aa8.92□□□□□ -0.98
LAMA3-213ENST00000592442 UNC13AQ9UPW8 1703 aa8.91□□□□□ -0.98
LAMA3-213ENST00000592442 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
LAMA3-213ENST00000592442 KIF3CO14782 793 aa8.91□□□□□ -0.98
LAMA3-213ENST00000592442 FOXK1P85037 733 aa8.91□□□□□ -0.98
LAMA3-213ENST00000592442 MFSD10Q14728 455 aa8.9□□□□□ -0.98
LAMA3-213ENST00000592442 BICRAQ9NZM4 1560 aa8.88□□□□□ -0.99
LAMA3-213ENST00000592442 E2F4Q16254 413 aa8.88□□□□□ -0.99
LAMA3-213ENST00000592442 P3H3Q8IVL6 736 aa8.86□□□□□ -0.99
LAMA3-213ENST00000592442 SNPHO15079 494 aa8.85□□□□□ -0.99
LAMA3-213ENST00000592442 ZNF710Q8N1W2 664 aa8.85□□□□□ -0.99
LAMA3-213ENST00000592442 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
LAMA3-213ENST00000592442 RIMBP2O15034 1052 aa8.84□□□□□ -0.99
LAMA3-213ENST00000592442 DOK7Q18PE1 504 aa8.84□□□□□ -0.99
LAMA3-213ENST00000592442 KCNV2Q8TDN2 545 aa8.82□□□□□ -1
LAMA3-213ENST00000592442 TBC1D12O60347 775 aa8.8□□□□□ -1
LAMA3-213ENST00000592442 MAP3K9P80192 1104 aa8.8□□□□□ -1
LAMA3-213ENST00000592442 CAMK2BQ13554 666 aa8.79□□□□□ -1
LAMA3-213ENST00000592442 EMILIN3Q9NT22 766 aa8.79□□□□□ -1
LAMA3-213ENST00000592442 ZNF316A6NFI3 1004 aaPredicted RBP8.78□□□□□ -1
LAMA3-213ENST00000592442 DPYSL4O14531 572 aa8.78□□□□□ -1
LAMA3-213ENST00000592442 HOXB3P14651 431 aaPredicted RBP8.78□□□□□ -1
LAMA3-213ENST00000592442 SLC34A2O95436 690 aa8.76□□□□□ -1.01
LAMA3-213ENST00000592442 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
LAMA3-213ENST00000592442 PCDHGA4Q9Y5G9 962 aa8.76□□□□□ -1.01
LAMA3-213ENST00000592442 NBR1Q14596 966 aa8.75□□□□□ -1.01
LAMA3-213ENST00000592442 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
LAMA3-213ENST00000592442 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
LAMA3-213ENST00000592442 FAM163AQ96GL9 167 aaPredicted RBP8.75□□□□□ -1.01
LAMA3-213ENST00000592442 ARSIQ5FYB1 569 aa8.74□□□□□ -1.01
LAMA3-213ENST00000592442 ZSWIM6Q9HCJ5 1215 aa8.74□□□□□ -1.01
LAMA3-213ENST00000592442 EVI5O60447 810 aa8.71□□□□□ -1.02
LAMA3-213ENST00000592442 NUDT7P0C024 238 aa8.71□□□□□ -1.02
LAMA3-213ENST00000592442 KHSRPQ92945 711 aaKnown RBP eCLIP8.71□□□□□ -1.02
LAMA3-213ENST00000592442 EIF4G1Q04637 1599 aaKnown RBP8.69□□□□□ -1.02
LAMA3-213ENST00000592442 SPDYE16A6NNV3 312 aaPredicted RBP8.69□□□□□ -1.02
LAMA3-213ENST00000592442 ST18O60284 1047 aa8.69□□□□□ -1.02
LAMA3-213ENST00000592442 GPR153Q6NV75 609 aa8.69□□□□□ -1.02
LAMA3-213ENST00000592442 PDIA6Q15084 440 aa8.68□□□□□ -1.02
LAMA3-213ENST00000592442 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-213ENST00000592442 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
LAMA3-213ENST00000592442 BCANQ96GW7 911 aa8.67□□□□□ -1.02
LAMA3-213ENST00000592442 EMP3P54852 163 aa8.66□□□□□ -1.02
LAMA3-213ENST00000592442 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
LAMA3-213ENST00000592442 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
LAMA3-213ENST00000592442 SEMA3EO15041 775 aa8.65□□□□□ -1.02
LAMA3-213ENST00000592442 TULP1O00294 542 aaPredicted RBP8.64□□□□□ -1.03
LAMA3-213ENST00000592442 DDX12PQ92771 950 aa8.64□□□□□ -1.03
LAMA3-213ENST00000592442 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
LAMA3-213ENST00000592442 BAZ1AQ9NRL2 1556 aaPredicted RBP8.64□□□□□ -1.03
LAMA3-213ENST00000592442 CECR2Q9BXF3 1484 aa8.64□□□□□ -1.03
LAMA3-213ENST00000592442 ERBB3P21860 1342 aa8.63□□□□□ -1.03
LAMA3-213ENST00000592442 LHX6Q9UPM6 363 aa8.62□□□□□ -1.03
LAMA3-213ENST00000592442 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
LAMA3-213ENST00000592442 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
LAMA3-213ENST00000592442 FAM205CA6NFA0 338 aa8.6□□□□□ -1.03
LAMA3-213ENST00000592442 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
LAMA3-213ENST00000592442 SMARCA4P51532 1647 aa8.59□□□□□ -1.03
LAMA3-213ENST00000592442 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-213ENST00000592442 VARS2Q5ST30 1063 aaKnown RBP8.59□□□□□ -1.03
LAMA3-213ENST00000592442 ANO8Q9HCE9 1232 aaPredicted RBP8.59□□□□□ -1.03
LAMA3-213ENST00000592442 PPP4R3BQ5MIZ7 849 aa8.58□□□□□ -1.04
LAMA3-213ENST00000592442 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
LAMA3-213ENST00000592442 KDM4FA0A1W2PPD8 638 aa8.57□□□□□ -1.04
LAMA3-213ENST00000592442 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
LAMA3-213ENST00000592442 SMARCA2P51531 1590 aa8.56□□□□□ -1.04
LAMA3-213ENST00000592442 PHF14O94880 888 aa8.56□□□□□ -1.04
LAMA3-213ENST00000592442 PTGER2P43116 358 aa8.56□□□□□ -1.04
LAMA3-213ENST00000592442 FOSBP53539 338 aa8.56□□□□□ -1.04
LAMA3-213ENST00000592442 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
LAMA3-213ENST00000592442 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
LAMA3-213ENST00000592442 MROH2BQ7Z745 1585 aa8.56□□□□□ -1.04
LAMA3-213ENST00000592442 MAP3K7O43318 606 aa8.55□□□□□ -1.04
LAMA3-213ENST00000592442 TYW1BQ6NUM6 668 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms