RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 KRTAP3-2Q9BYR7 98 aa10.81□□□□□ -0.68
TPM4-214ENST00000591645 STK24Q9Y6E0 443 aa10.81□□□□□ -0.68
TPM4-214ENST00000591645 DOK7Q18PE1 504 aa10.8□□□□□ -0.68
TPM4-214ENST00000591645 HOXB1P14653 301 aaPredicted RBP10.79□□□□□ -0.68
TPM4-214ENST00000591645 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
TPM4-214ENST00000591645 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.69
TPM4-214ENST00000591645 NLRP6P59044 892 aa10.74□□□□□ -0.69
TPM4-214ENST00000591645 FBXO22Q8NEZ5 403 aa10.74□□□□□ -0.69
TPM4-214ENST00000591645 ERBB3P21860 1342 aa10.73□□□□□ -0.69
TPM4-214ENST00000591645 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
TPM4-214ENST00000591645 DNAJC5Q9H3Z4 198 aa10.72□□□□□ -0.69
TPM4-214ENST00000591645 MFRPQ9BY79 579 aa10.71□□□□□ -0.69
TPM4-214ENST00000591645 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
TPM4-214ENST00000591645 VARS2Q5ST30 1063 aaKnown RBP10.68□□□□□ -0.7
TPM4-214ENST00000591645 GPR153Q6NV75 609 aa10.68□□□□□ -0.7
TPM4-214ENST00000591645 ZSWIM6Q9HCJ5 1215 aa10.67□□□□□ -0.7
TPM4-214ENST00000591645 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
TPM4-214ENST00000591645 ARSIQ5FYB1 569 aa10.64□□□□□ -0.71
TPM4-214ENST00000591645 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
TPM4-214ENST00000591645 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
TPM4-214ENST00000591645 KIF3CO14782 793 aa10.59□□□□□ -0.71
TPM4-214ENST00000591645 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
TPM4-214ENST00000591645 NKX1-1Q15270 411 aaPredicted RBP10.58□□□□□ -0.72
TPM4-214ENST00000591645 DCAF8L2P0C7V8 631 aa10.57□□□□□ -0.72
TPM4-214ENST00000591645 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
TPM4-214ENST00000591645 PPP1R37O75864 691 aa10.55□□□□□ -0.72
TPM4-214ENST00000591645 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
TPM4-214ENST00000591645 NUDT7P0C024 238 aa10.5□□□□□ -0.73
TPM4-214ENST00000591645 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
TPM4-214ENST00000591645 RNF166Q96A37 237 aaPredicted RBP10.49□□□□□ -0.73
TPM4-214ENST00000591645 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
TPM4-214ENST00000591645 ANKRD13DQ6ZTN6 518 aa10.46□□□□□ -0.73
TPM4-214ENST00000591645 MYT1LQ9UL68 1186 aa10.46□□□□□ -0.73
TPM4-214ENST00000591645 PCDHGA4Q9Y5G9 962 aa10.46□□□□□ -0.73
TPM4-214ENST00000591645 SLC34A2O95436 690 aa10.45□□□□□ -0.74
TPM4-214ENST00000591645 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
TPM4-214ENST00000591645 BBXQ8WY36 941 aaPredicted RBP10.44□□□□□ -0.74
TPM4-214ENST00000591645 LSM11P83369 360 aaKnown RBP eCLIP10.41□□□□□ -0.74
TPM4-214ENST00000591645 POTEEQ6S8J3 1075 aa10.4□□□□□ -0.74
TPM4-214ENST00000591645 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
TPM4-214ENST00000591645 PTGER2P43116 358 aa10.36□□□□□ -0.75
TPM4-214ENST00000591645 PBX2P40425 430 aa10.35□□□□□ -0.75
TPM4-214ENST00000591645 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
TPM4-214ENST00000591645 FOXK1P85037 733 aa10.34□□□□□ -0.75
TPM4-214ENST00000591645 GPHNQ9NQX3 736 aaPredicted RBP10.34□□□□□ -0.75
TPM4-214ENST00000591645 KDM4FA0A1W2PPD8 638 aa10.33□□□□□ -0.76
TPM4-214ENST00000591645 DSG2Q14126 1118 aa10.33□□□□□ -0.76
TPM4-214ENST00000591645 PTCD2Q8WV60 388 aaKnown RBP10.33□□□□□ -0.76
TPM4-214ENST00000591645 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
TPM4-214ENST00000591645 CRISPLD2Q9H0B8 497 aa10.31□□□□□ -0.76
TPM4-214ENST00000591645 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
TPM4-214ENST00000591645 SPRYD3Q8NCJ5 442 aa10.28□□□□□ -0.76
TPM4-214ENST00000591645 PSDA5PKW4 1024 aaPredicted RBP10.27□□□□□ -0.77
TPM4-214ENST00000591645 NCKAP5LQ9HCH0 1330 aa10.27□□□□□ -0.77
TPM4-214ENST00000591645 PSEN2P49810 448 aa10.25□□□□□ -0.77
TPM4-214ENST00000591645 ADGRD1Q6QNK2 874 aa10.25□□□□□ -0.77
TPM4-214ENST00000591645 TBC1D12O60347 775 aa10.24□□□□□ -0.77
TPM4-214ENST00000591645 PDE4AP27815 886 aa10.24□□□□□ -0.77
TPM4-214ENST00000591645 DMRTA1Q5VZB9 504 aa10.24□□□□□ -0.77
TPM4-214ENST00000591645 MFSD10Q14728 455 aa10.21□□□□□ -0.77
TPM4-214ENST00000591645 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
TPM4-214ENST00000591645 CADPS2Q86UW7 1296 aa10.21□□□□□ -0.77
TPM4-214ENST00000591645 UPF1Q92900 1129 aaKnown RBP eCLIP10.21□□□□□ -0.771e-7■□□□□ 8.3
TPM4-214ENST00000591645 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
TPM4-214ENST00000591645 PAXIP1Q6ZW49 1069 aaPredicted RBP10.2□□□□□ -0.78
TPM4-214ENST00000591645 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
TPM4-214ENST00000591645 TK2O00142 265 aa10.17□□□□□ -0.78
TPM4-214ENST00000591645 HRO43593 1189 aa10.17□□□□□ -0.78
TPM4-214ENST00000591645 DDX27Q96GQ7 796 aaKnown RBP10.17□□□□□ -0.78
TPM4-214ENST00000591645 CFAP44Q96MT7 982 aa10.17□□□□□ -0.78
TPM4-214ENST00000591645 LARP6Q9BRS8 491 aaKnown RBP10.17□□□□□ -0.78
TPM4-214ENST00000591645 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
TPM4-214ENST00000591645 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
TPM4-214ENST00000591645 ZNF454Q8N9F8 522 aa10.13□□□□□ -0.79
TPM4-214ENST00000591645 PLA2G2EQ9NZK7 142 aa10.1□□□□□ -0.79
TPM4-214ENST00000591645 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
TPM4-214ENST00000591645 KCNH8Q96L42 1107 aa10.09□□□□□ -0.79
TPM4-214ENST00000591645 FOSBP53539 338 aa10.08□□□□□ -0.8
TPM4-214ENST00000591645 STAC3Q96MF2 364 aa10.08□□□□□ -0.8
TPM4-214ENST00000591645 VPS9D1Q9Y2B5 631 aa10.08□□□□□ -0.8
TPM4-214ENST00000591645 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
TPM4-214ENST00000591645 BCL2L12Q9HB09 334 aa10.07□□□□□ -0.8
TPM4-214ENST00000591645 EVI5O60447 810 aa10.06□□□□□ -0.8
TPM4-214ENST00000591645 ANO8Q9HCE9 1232 aaPredicted RBP10.06□□□□□ -0.8
TPM4-214ENST00000591645 EMILIN3Q9NT22 766 aa10.04□□□□□ -0.8
TPM4-214ENST00000591645 PTPREP23469 700 aa10.02□□□□□ -0.81
TPM4-214ENST00000591645 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
TPM4-214ENST00000591645 MAP3K9P80192 1104 aa10.01□□□□□ -0.81
TPM4-214ENST00000591645 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
TPM4-214ENST00000591645 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
TPM4-214ENST00000591645 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
TPM4-214ENST00000591645 ZDHHC16Q969W1 377 aa10□□□□□ -0.81
TPM4-214ENST00000591645 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
TPM4-214ENST00000591645 BHMG1C9JSJ3 638 aaPredicted RBP9.99□□□□□ -0.81
TPM4-214ENST00000591645 PTPN5P54829 565 aa9.99□□□□□ -0.81
TPM4-214ENST00000591645 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
TPM4-214ENST00000591645 E2F4Q16254 413 aa9.96□□□□□ -0.82
TPM4-214ENST00000591645 WDR70Q9NW82 654 aa9.96□□□□□ -0.82
TPM4-214ENST00000591645 ARIH1Q9Y4X5 557 aaPredicted RBP9.96□□□□□ -0.82
TPM4-214ENST00000591645 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms