RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 POGZQ7Z3K3 1410 aa33.17■■■□□ 2.9
CIRBP-226ENST00000590171 ARHGAP5Q13017 1502 aa33.17■■■□□ 2.9
CIRBP-226ENST00000590171 PREX2Q70Z35 1606 aa33.1■■■□□ 2.89
CIRBP-226ENST00000590171 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
CIRBP-226ENST00000590171 ZFYVE16Q7Z3T8 1539 aa33.1■■■□□ 2.89
CIRBP-226ENST00000590171 YEATS2Q9ULM3 1422 aa33.1■■■□□ 2.89
CIRBP-226ENST00000590171 CDC42BPBQ9Y5S2 1711 aa33.09■■■□□ 2.89
CIRBP-226ENST00000590171 MAGI2Q86UL8 1455 aa33.09■■■□□ 2.89
CIRBP-226ENST00000590171 ARID4BQ4LE39 1312 aaPredicted RBP33.04■■■□□ 2.88
CIRBP-226ENST00000590171 ADAMTSL3P82987 1691 aa33.04■■■□□ 2.88
CIRBP-226ENST00000590171 BCORL1Q5H9F3 1711 aa33.02■■■□□ 2.88
CIRBP-226ENST00000590171 ZNF518AQ6AHZ1 1483 aa33.02■■■□□ 2.88
CIRBP-226ENST00000590171 CDC42BPAQ5VT25 1732 aa33.01■■■□□ 2.87
CIRBP-226ENST00000590171 ABCC1P33527 1531 aa32.98■■■□□ 2.87
CIRBP-226ENST00000590171 KDM5CP41229 1560 aa32.98■■■□□ 2.87
CIRBP-226ENST00000590171 MTUS2Q5JR59 1369 aa32.97■■■□□ 2.87
CIRBP-226ENST00000590171 SIGLEC1Q9BZZ2 1709 aa32.97■■■□□ 2.87
CIRBP-226ENST00000590171 AFAP1Q8N556 730 aa32.97■■■□□ 2.87
CIRBP-226ENST00000590171 ARHGEF12Q9NZN5 1544 aa32.96■■■□□ 2.87
CIRBP-226ENST00000590171 GPATCH8Q9UKJ3 1502 aaKnown RBP32.96■■■□□ 2.87
CIRBP-226ENST00000590171 MADDQ8WXG6 1647 aa32.93■■■□□ 2.86
CIRBP-226ENST00000590171 PTPRMP28827 1452 aa32.93■■■□□ 2.86
CIRBP-226ENST00000590171 TRAPPC8Q9Y2L5 1435 aa32.92■■■□□ 2.86
CIRBP-226ENST00000590171 ATP10AO60312 1499 aa32.92■■■□□ 2.86
CIRBP-226ENST00000590171 EHBP1L1Q8N3D4 1523 aa32.91■■■□□ 2.86
CIRBP-226ENST00000590171 ITSN2Q9NZM3 1697 aa32.91■■■□□ 2.86
CIRBP-226ENST00000590171 HECW2Q9P2P5 1572 aa32.89■■■□□ 2.86
CIRBP-226ENST00000590171 SAMD9LQ8IVG5 1584 aa32.88■■■□□ 2.85
CIRBP-226ENST00000590171 C9orf84Q5VXU9 1444 aa32.88■■■□□ 2.85
CIRBP-226ENST00000590171 CCNB3Q8WWL7 1395 aa32.87■■■□□ 2.85
CIRBP-226ENST00000590171 VPS8Q8N3P4 1428 aa32.86■■■□□ 2.85
CIRBP-226ENST00000590171 ZNF777Q9ULD5 760 aaPredicted RBP32.86■■■□□ 2.85
CIRBP-226ENST00000590171 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
CIRBP-226ENST00000590171 DIP2CQ9Y2E4 1556 aa32.83■■■□□ 2.85
CIRBP-226ENST00000590171 CFDP1Q9UEE9 299 aaPredicted RBP32.82■■■□□ 2.84
CIRBP-226ENST00000590171 MYT1LQ9UL68 1186 aa32.82■■■□□ 2.84
CIRBP-226ENST00000590171 SYCP2Q9BX26 1530 aa32.82■■■□□ 2.84
CIRBP-226ENST00000590171 TIAM1Q13009 1591 aa32.81■■■□□ 2.84
CIRBP-226ENST00000590171 RIMS1Q86UR5 1692 aaKnown RBP32.81■■■□□ 2.84
CIRBP-226ENST00000590171 ABCA6Q8N139 1617 aa32.8■■■□□ 2.84
CIRBP-226ENST00000590171 MLECQ14165 292 aa32.79■■■□□ 2.84
CIRBP-226ENST00000590171 HNRNPMP52272 730 aaKnown RBP eCLIP32.75■■■□□ 2.83
CIRBP-226ENST00000590171 KIAA1107Q9UPP5 1409 aa32.75■■■□□ 2.83
CIRBP-226ENST00000590171 REREQ9P2R6 1566 aa32.75■■■□□ 2.83
CIRBP-226ENST00000590171 PLEKHH2Q8IVE3 1493 aa32.74■■■□□ 2.83
CIRBP-226ENST00000590171 KIDINS220Q9ULH0 1771 aa32.73■■■□□ 2.83
CIRBP-226ENST00000590171 NCOA2Q15596 1464 aa32.71■■■□□ 2.83
CIRBP-226ENST00000590171 SUPT6HQ7KZ85 1726 aaKnown RBP32.69■■■□□ 2.82
CIRBP-226ENST00000590171 FER1L4A9Z1Z3 1794 aa32.69■■■□□ 2.82
CIRBP-226ENST00000590171 ZNF644Q9H582 1327 aaPredicted RBP32.68■■■□□ 2.82
CIRBP-226ENST00000590171 SPAG9O60271 1321 aaKnown RBP32.66■■■□□ 2.82
CIRBP-226ENST00000590171 LRRC9Q6ZRR7 1453 aa32.66■■■□□ 2.82
CIRBP-226ENST00000590171 AGLP35573 1532 aa32.64■■■□□ 2.82
CIRBP-226ENST00000590171 MAP3K1Q13233 1512 aa32.62■■■□□ 2.81
CIRBP-226ENST00000590171 PLPPR3Q6T4P5 718 aa32.62■■■□□ 2.81
CIRBP-226ENST00000590171 INO80Q9ULG1 1556 aaPredicted RBP32.62■■■□□ 2.81
CIRBP-226ENST00000590171 ATP7AQ04656 1500 aa32.61■■■□□ 2.81
CIRBP-226ENST00000590171 MBD5Q9P267 1494 aa32.61■■■□□ 2.81
CIRBP-226ENST00000590171 LMTK3Q96Q04 1460 aa32.57■■■□□ 2.8
CIRBP-226ENST00000590171 KANK4Q5T7N3 995 aaPredicted RBP32.57■■■□□ 2.8
CIRBP-226ENST00000590171 CAMSAP2Q08AD1 1489 aa32.54■■■□□ 2.8
CIRBP-226ENST00000590171 PLXNC1O60486 1568 aa32.49■■■□□ 2.79
CIRBP-226ENST00000590171 CEBPAP49715 358 aaPredicted RBP32.49■■■□□ 2.79
CIRBP-226ENST00000590171 A2MP01023 1474 aa32.48■■■□□ 2.79
CIRBP-226ENST00000590171 CCDC141Q6ZP82 1450 aa32.47■■■□□ 2.79
CIRBP-226ENST00000590171 RTEL1-TNFRSF6BF6WH68 1400 aa32.45■■■□□ 2.79
CIRBP-226ENST00000590171 ADGBQ8N7X0 1667 aa32.41■■■□□ 2.78
CIRBP-226ENST00000590171 ESF1Q9H501 851 aaKnown RBP32.4■■■□□ 2.78
CIRBP-226ENST00000590171 MYOM3Q5VTT5 1437 aa32.4■■■□□ 2.78
CIRBP-226ENST00000590171 ARHGEF5Q12774 1597 aa32.4■■■□□ 2.78
CIRBP-226ENST00000590171 APLP2Q06481 763 aa32.39■■■□□ 2.78
CIRBP-226ENST00000590171 RSPH4AQ5TD94 716 aa32.39■■■□□ 2.78
CIRBP-226ENST00000590171 CNTLNQ9NXG0 1405 aa32.38■■■□□ 2.77
CIRBP-226ENST00000590171 HSPA2P54652 639 aa32.38■■■□□ 2.77
CIRBP-226ENST00000590171 C3P01024 1663 aa32.37■■■□□ 2.77
CIRBP-226ENST00000590171 MIA2Q96PC5 1412 aa32.35■■■□□ 2.77
CIRBP-226ENST00000590171 PREX1Q8TCU6 1659 aa32.34■■■□□ 2.77
CIRBP-226ENST00000590171 DHX29Q7Z478 1369 aaKnown RBP32.32■■■□□ 2.76
CIRBP-226ENST00000590171 GGT6Q6P531 493 aa32.29■■■□□ 2.76
CIRBP-226ENST00000590171 MROH2AA6NES4 1674 aa32.29■■■□□ 2.76
CIRBP-226ENST00000590171 TSPY4P0CV99 314 aa32.27■■■□□ 2.76
CIRBP-226ENST00000590171 TSPY10P0CW01 314 aa32.27■■■□□ 2.76
CIRBP-226ENST00000590171 UHRF1BP1Q6BDS2 1440 aa32.26■■■□□ 2.76
CIRBP-226ENST00000590171 CLTCQ00610 1675 aaKnown RBP32.25■■■□□ 2.75
CIRBP-226ENST00000590171 ZMYM3Q14202 1370 aa32.25■■■□□ 2.75
CIRBP-226ENST00000590171 MAST1Q9Y2H9 1570 aa32.24■■■□□ 2.75
CIRBP-226ENST00000590171 PPP6R1Q9UPN7 881 aa32.19■■■□□ 2.74
CIRBP-226ENST00000590171 NPATQ14207 1427 aa32.18■■■□□ 2.74
CIRBP-226ENST00000590171 KIF3BO15066 747 aa32.18■■■□□ 2.74
CIRBP-226ENST00000590171 PTPN23Q9H3S7 1636 aa32.18■■■□□ 2.74
CIRBP-226ENST00000590171 SETD1BQ9UPS6 1966 aaKnown RBP32.18■■■□□ 2.74
CIRBP-226ENST00000590171 FGD6Q6ZV73 1430 aa32.16■■■□□ 2.74
CIRBP-226ENST00000590171 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
CIRBP-226ENST00000590171 PTPRKQ15262 1439 aa32.12■■■□□ 2.73
CIRBP-226ENST00000590171 ABCC5O15440 1437 aa32.1■■■□□ 2.73
CIRBP-226ENST00000590171 KDM5DQ9BY66 1539 aa32.09■■■□□ 2.73
CIRBP-226ENST00000590171 ILDR1Q86SU0 546 aaPredicted RBP32.08■■■□□ 2.73
CIRBP-226ENST00000590171 FAM135AQ9P2D6 1515 aa32.08■■■□□ 2.73
CIRBP-226ENST00000590171 SHANK2Q9UPX8 1470 aa32.08■■■□□ 2.73
CIRBP-226ENST00000590171 CROCC2H7BZ55 1655 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms