RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 LRRIQ1Q96JM4 1722 aa29.28■■■□□ 2.28
PRKCSH-211ENST00000590098 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
PRKCSH-211ENST00000590098 ZFYVE16Q7Z3T8 1539 aa29.27■■■□□ 2.28
PRKCSH-211ENST00000590098 MAGI2Q86UL8 1455 aa29.27■■■□□ 2.28
PRKCSH-211ENST00000590098 MADDQ8WXG6 1647 aa29.27■■■□□ 2.28
PRKCSH-211ENST00000590098 POGZQ7Z3K3 1410 aa29.24■■■□□ 2.27
PRKCSH-211ENST00000590098 CASKIN1Q8WXD9 1431 aa29.21■■■□□ 2.27
PRKCSH-211ENST00000590098 PCF11O94913 1555 aaKnown RBP29.2■■■□□ 2.26
PRKCSH-211ENST00000590098 SIGLEC1Q9BZZ2 1709 aa29.2■■■□□ 2.26
PRKCSH-211ENST00000590098 ARHGAP5Q13017 1502 aa29.2■■■□□ 2.26
PRKCSH-211ENST00000590098 CCDC18Q5T9S5 1454 aa29.19■■■□□ 2.26
PRKCSH-211ENST00000590098 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
PRKCSH-211ENST00000590098 MLECQ14165 292 aa29.15■■■□□ 2.26
PRKCSH-211ENST00000590098 PLPPR3Q6T4P5 718 aa29.14■■■□□ 2.26
PRKCSH-211ENST00000590098 AFAP1Q8N556 730 aa29.12■■■□□ 2.25
PRKCSH-211ENST00000590098 ATP10AO60312 1499 aa29.11■■■□□ 2.25
PRKCSH-211ENST00000590098 ZNF518AQ6AHZ1 1483 aa29.11■■■□□ 2.25
PRKCSH-211ENST00000590098 FYCO1Q9BQS8 1478 aa29.1■■■□□ 2.25
PRKCSH-211ENST00000590098 CDC42BPBQ9Y5S2 1711 aa29.1■■■□□ 2.25
PRKCSH-211ENST00000590098 MYT1LQ9UL68 1186 aa29.08■■■□□ 2.25
PRKCSH-211ENST00000590098 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
PRKCSH-211ENST00000590098 LMTK3Q96Q04 1460 aa29.07■■■□□ 2.24
PRKCSH-211ENST00000590098 PREX2Q70Z35 1606 aa29.06■■■□□ 2.24
PRKCSH-211ENST00000590098 FER1L4A9Z1Z3 1794 aa29.05■■■□□ 2.24
PRKCSH-211ENST00000590098 KDM5CP41229 1560 aa29.04■■■□□ 2.24
PRKCSH-211ENST00000590098 HSPA2P54652 639 aa29.02■■■□□ 2.24
PRKCSH-211ENST00000590098 CDC42BPAQ5VT25 1732 aa28.99■■■□□ 2.23
PRKCSH-211ENST00000590098 ABCC1P33527 1531 aa28.97■■■□□ 2.23
PRKCSH-211ENST00000590098 ARHGEF12Q9NZN5 1544 aa28.97■■■□□ 2.23
PRKCSH-211ENST00000590098 CEBPAP49715 358 aaPredicted RBP28.95■■■□□ 2.22
PRKCSH-211ENST00000590098 MLH3Q9UHC1 1453 aa28.95■■■□□ 2.22
PRKCSH-211ENST00000590098 ITSN2Q9NZM3 1697 aa28.95■■■□□ 2.22
PRKCSH-211ENST00000590098 TRAPPC8Q9Y2L5 1435 aa28.94■■■□□ 2.22
PRKCSH-211ENST00000590098 DIP2CQ9Y2E4 1556 aa28.94■■■□□ 2.22
PRKCSH-211ENST00000590098 ZNF777Q9ULD5 760 aaPredicted RBP28.91■■■□□ 2.22
PRKCSH-211ENST00000590098 ABCA6Q8N139 1617 aa28.9■■■□□ 2.22
PRKCSH-211ENST00000590098 REREQ9P2R6 1566 aa28.89■■■□□ 2.22
PRKCSH-211ENST00000590098 GPATCH8Q9UKJ3 1502 aaKnown RBP28.87■■■□□ 2.21
PRKCSH-211ENST00000590098 FBXO41Q8TF61 875 aa28.86■■■□□ 2.21
PRKCSH-211ENST00000590098 MTUS2Q5JR59 1369 aa28.85■■■□□ 2.21
PRKCSH-211ENST00000590098 SAMD9LQ8IVG5 1584 aa28.84■■■□□ 2.21
PRKCSH-211ENST00000590098 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
PRKCSH-211ENST00000590098 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
PRKCSH-211ENST00000590098 CFDP1Q9UEE9 299 aaPredicted RBP28.82■■■□□ 2.2
PRKCSH-211ENST00000590098 AGLP35573 1532 aa28.8■■■□□ 2.2
PRKCSH-211ENST00000590098 SYCP2Q9BX26 1530 aa28.8■■■□□ 2.2
PRKCSH-211ENST00000590098 HNRNPMP52272 730 aaKnown RBP eCLIP28.8■■■□□ 2.2
PRKCSH-211ENST00000590098 ESF1Q9H501 851 aaKnown RBP28.8■■■□□ 2.2
PRKCSH-211ENST00000590098 PREX1Q8TCU6 1659 aa28.8■■■□□ 2.2
PRKCSH-211ENST00000590098 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
PRKCSH-211ENST00000590098 PLEKHH2Q8IVE3 1493 aa28.78■■■□□ 2.2
PRKCSH-211ENST00000590098 SPAG9O60271 1321 aaKnown RBP28.77■■■□□ 2.2
PRKCSH-211ENST00000590098 SETD1BQ9UPS6 1966 aaKnown RBP28.75■■■□□ 2.19
PRKCSH-211ENST00000590098 KIAA1107Q9UPP5 1409 aa28.75■■■□□ 2.19
PRKCSH-211ENST00000590098 EHBP1L1Q8N3D4 1523 aa28.72■■■□□ 2.19
PRKCSH-211ENST00000590098 C3P01024 1663 aa28.7■■■□□ 2.19
PRKCSH-211ENST00000590098 UHRF1BP1Q6BDS2 1440 aa28.69■■■□□ 2.18
PRKCSH-211ENST00000590098 ATP7AQ04656 1500 aa28.68■■■□□ 2.18
PRKCSH-211ENST00000590098 TIAM1Q13009 1591 aa28.67■■■□□ 2.18
PRKCSH-211ENST00000590098 CNTLNQ9NXG0 1405 aa28.67■■■□□ 2.18
PRKCSH-211ENST00000590098 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
PRKCSH-211ENST00000590098 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
PRKCSH-211ENST00000590098 INO80Q9ULG1 1556 aaPredicted RBP28.64■■■□□ 2.18
PRKCSH-211ENST00000590098 CERKQ8TCT0 537 aa28.62■■■□□ 2.17
PRKCSH-211ENST00000590098 A2MP01023 1474 aa28.6■■■□□ 2.17
PRKCSH-211ENST00000590098 DMRT2Q9Y5R5 561 aa28.58■■■□□ 2.17
PRKCSH-211ENST00000590098 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
PRKCSH-211ENST00000590098 MROH2AA6NES4 1674 aa28.57■■■□□ 2.16
PRKCSH-211ENST00000590098 STRCQ7RTU9 1775 aa28.57■■■□□ 2.16
PRKCSH-211ENST00000590098 LOC105371045A0A1W2PR82 267 aa28.56■■■□□ 2.16
PRKCSH-211ENST00000590098 ADGBQ8N7X0 1667 aa28.55■■■□□ 2.16
PRKCSH-211ENST00000590098 NCOA2Q15596 1464 aa28.54■■■□□ 2.16
PRKCSH-211ENST00000590098 MBD5Q9P267 1494 aa28.54■■■□□ 2.16
PRKCSH-211ENST00000590098 ZMYM3Q14202 1370 aa28.54■■■□□ 2.16
PRKCSH-211ENST00000590098 GGT6Q6P531 493 aa28.52■■■□□ 2.16
PRKCSH-211ENST00000590098 CLTCQ00610 1675 aaKnown RBP28.51■■■□□ 2.15
PRKCSH-211ENST00000590098 RTEL1-TNFRSF6BF6WH68 1400 aa28.5■■■□□ 2.15
PRKCSH-211ENST00000590098 NPATQ14207 1427 aa28.5■■■□□ 2.15
PRKCSH-211ENST00000590098 VPS8Q8N3P4 1428 aa28.5■■■□□ 2.15
PRKCSH-211ENST00000590098 CAMSAP2Q08AD1 1489 aa28.46■■■□□ 2.15
PRKCSH-211ENST00000590098 RSPH4AQ5TD94 716 aa28.46■■■□□ 2.15
PRKCSH-211ENST00000590098 PPP6R1Q9UPN7 881 aa28.46■■■□□ 2.15
PRKCSH-211ENST00000590098 CCDC141Q6ZP82 1450 aa28.46■■■□□ 2.15
PRKCSH-211ENST00000590098 DHX29Q7Z478 1369 aaKnown RBP28.42■■■□□ 2.14
PRKCSH-211ENST00000590098 LRRC9Q6ZRR7 1453 aa28.41■■■□□ 2.14
PRKCSH-211ENST00000590098 PTPRTO14522 1441 aa28.41■■■□□ 2.14
PRKCSH-211ENST00000590098 NCOA1Q15788 1441 aa28.38■■■□□ 2.13
PRKCSH-211ENST00000590098 PTPRKQ15262 1439 aa28.37■■■□□ 2.13
PRKCSH-211ENST00000590098 TSPY4P0CV99 314 aa28.37■■■□□ 2.13
PRKCSH-211ENST00000590098 TSPY10P0CW01 314 aa28.37■■■□□ 2.13
PRKCSH-211ENST00000590098 KIF3BO15066 747 aa28.36■■■□□ 2.13
PRKCSH-211ENST00000590098 ARHGEF5Q12774 1597 aa28.36■■■□□ 2.13
PRKCSH-211ENST00000590098 CAMSAP1Q5T5Y3 1602 aa28.36■■■□□ 2.13
PRKCSH-211ENST00000590098 MAP3K1Q13233 1512 aa28.34■■■□□ 2.13
PRKCSH-211ENST00000590098 MYO3AQ8NEV4 1616 aa28.34■■■□□ 2.13
PRKCSH-211ENST00000590098 NCKAP5LQ9HCH0 1330 aa28.34■■■□□ 2.13
PRKCSH-211ENST00000590098 KANK4Q5T7N3 995 aaPredicted RBP28.32■■■□□ 2.12
PRKCSH-211ENST00000590098 ZNF142P52746 1687 aaPredicted RBP28.31■■■□□ 2.12
PRKCSH-211ENST00000590098 CEP170BQ9Y4F5 1589 aaPredicted RBP28.28■■■□□ 2.12
PRKCSH-211ENST00000590098 LTBP4Q8N2S1 1624 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms