RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 KCNH8Q96L42 1107 aa28.71■■■□□ 2.19
POLR2E-207ENST00000590060 ARHGAP5Q13017 1502 aa28.7■■■□□ 2.19
POLR2E-207ENST00000590060 SETD5Q9C0A6 1442 aa28.69■■■□□ 2.18
POLR2E-207ENST00000590060 ZNF777Q9ULD5 760 aaPredicted RBP28.69■■■□□ 2.18
POLR2E-207ENST00000590060 DAPK1P53355 1430 aa28.69■■■□□ 2.18
POLR2E-207ENST00000590060 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
POLR2E-207ENST00000590060 PLEKHH2Q8IVE3 1493 aa28.66■■■□□ 2.18
POLR2E-207ENST00000590060 ARAP3Q8WWN8 1544 aa28.65■■■□□ 2.18
POLR2E-207ENST00000590060 CDC42BPBQ9Y5S2 1711 aa28.64■■■□□ 2.18
POLR2E-207ENST00000590060 HFM1A2PYH4 1435 aa28.64■■■□□ 2.18
POLR2E-207ENST00000590060 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
POLR2E-207ENST00000590060 ABCA9Q8IUA7 1624 aa28.63■■■□□ 2.17
POLR2E-207ENST00000590060 PLCH2O75038 1416 aa28.62■■■□□ 2.17
POLR2E-207ENST00000590060 MAPKBP1O60336 1514 aa28.62■■■□□ 2.17
POLR2E-207ENST00000590060 RAB3GAP2Q9H2M9 1393 aa28.62■■■□□ 2.17
POLR2E-207ENST00000590060 PTPRKQ15262 1439 aa28.61■■■□□ 2.17
POLR2E-207ENST00000590060 ZNF644Q9H582 1327 aaPredicted RBP28.61■■■□□ 2.17
POLR2E-207ENST00000590060 ABCC5O15440 1437 aa28.6■■■□□ 2.17
POLR2E-207ENST00000590060 CROCC2H7BZ55 1655 aa28.6■■■□□ 2.17
POLR2E-207ENST00000590060 ROCK1Q13464 1354 aa28.6■■■□□ 2.17
POLR2E-207ENST00000590060 ARHGEF5Q12774 1597 aa28.59■■■□□ 2.17
POLR2E-207ENST00000590060 SAMD9LQ8IVG5 1584 aa28.59■■■□□ 2.17
POLR2E-207ENST00000590060 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
POLR2E-207ENST00000590060 GCC2Q8IWJ2 1684 aa28.57■■■□□ 2.16
POLR2E-207ENST00000590060 EFCAB2Q5VUJ9 269 aa28.56■■■□□ 2.16
POLR2E-207ENST00000590060 ADGBQ8N7X0 1667 aa28.56■■■□□ 2.16
POLR2E-207ENST00000590060 RSPH4AQ5TD94 716 aa28.55■■■□□ 2.16
POLR2E-207ENST00000590060 CCDC141Q6ZP82 1450 aa28.54■■■□□ 2.16
POLR2E-207ENST00000590060 KIAA1107Q9UPP5 1409 aa28.53■■■□□ 2.16
POLR2E-207ENST00000590060 NAIPQ13075 1403 aa28.52■■■□□ 2.16
POLR2E-207ENST00000590060 ACIN1Q9UKV3 1341 aaKnown RBP28.52■■■□□ 2.16
POLR2E-207ENST00000590060 CHIC2Q9UKJ5 165 aa28.51■■■□□ 2.15
POLR2E-207ENST00000590060 SYCP2Q9BX26 1530 aa28.5■■■□□ 2.15
POLR2E-207ENST00000590060 ADGRL2O95490 1459 aa28.5■■■□□ 2.15
POLR2E-207ENST00000590060 ANKRD30AQ9BXX3 1397 aa28.49■■■□□ 2.15
POLR2E-207ENST00000590060 TSPY4P0CV99 314 aa28.48■■■□□ 2.15
POLR2E-207ENST00000590060 TSPY10P0CW01 314 aa28.48■■■□□ 2.15
POLR2E-207ENST00000590060 CFAP74Q9C0B2 1584 aa28.48■■■□□ 2.15
POLR2E-207ENST00000590060 ABCC1P33527 1531 aa28.48■■■□□ 2.15
POLR2E-207ENST00000590060 C9orf84Q5VXU9 1444 aa28.47■■■□□ 2.15
POLR2E-207ENST00000590060 CLSPNQ9HAW4 1339 aa28.46■■■□□ 2.15
POLR2E-207ENST00000590060 FANCAO15360 1455 aa28.46■■■□□ 2.15
POLR2E-207ENST00000590060 MBD5Q9P267 1494 aa28.46■■■□□ 2.15
POLR2E-207ENST00000590060 DHX57Q6P158 1386 aaKnown RBP28.45■■■□□ 2.14
POLR2E-207ENST00000590060 RRP7BPQ9NSQ0 103 aa28.44■■■□□ 2.14
POLR2E-207ENST00000590060 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
POLR2E-207ENST00000590060 MAST1Q9Y2H9 1570 aa28.41■■■□□ 2.14
POLR2E-207ENST00000590060 CD109Q6YHK3 1445 aa28.41■■■□□ 2.14
POLR2E-207ENST00000590060 GLI2P10070 1586 aa28.38■■■□□ 2.13
POLR2E-207ENST00000590060 NCOA1Q15788 1441 aa28.38■■■□□ 2.13
POLR2E-207ENST00000590060 ADGRL1O94910 1474 aa28.34■■■□□ 2.13
POLR2E-207ENST00000590060 PLXNC1O60486 1568 aa28.3■■■□□ 2.12
POLR2E-207ENST00000590060 DIP2BQ9P265 1576 aa28.3■■■□□ 2.12
POLR2E-207ENST00000590060 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
POLR2E-207ENST00000590060 ARHGEF12Q9NZN5 1544 aa28.29■■■□□ 2.12
POLR2E-207ENST00000590060 KIF15Q9NS87 1388 aa28.29■■■□□ 2.12
POLR2E-207ENST00000590060 NEO1Q92859 1461 aa28.28■■■□□ 2.12
POLR2E-207ENST00000590060 ANKRD50Q9ULJ7 1429 aa28.26■■■□□ 2.12
POLR2E-207ENST00000590060 SCAPERQ9BY12 1400 aa28.26■■■□□ 2.11
POLR2E-207ENST00000590060 TRAPPC8Q9Y2L5 1435 aa28.25■■■□□ 2.11
POLR2E-207ENST00000590060 RTEL1-TNFRSF6BF6WH68 1400 aa28.24■■■□□ 2.11
POLR2E-207ENST00000590060 KDM6BO15054 1643 aa28.23■■■□□ 2.11
POLR2E-207ENST00000590060 TRIM52Q96A61 297 aa28.23■■■□□ 2.11
POLR2E-207ENST00000590060 SPAG9O60271 1321 aaKnown RBP28.22■■■□□ 2.11
POLR2E-207ENST00000590060 ZNF518AQ6AHZ1 1483 aa28.21■■■□□ 2.11
POLR2E-207ENST00000590060 FAM69CQ0P6D2 419 aa28.2■■■□□ 2.1
POLR2E-207ENST00000590060 ZFYVE16Q7Z3T8 1539 aa28.19■■■□□ 2.1
POLR2E-207ENST00000590060 DUOX2Q9NRD8 1548 aa28.19■■■□□ 2.1
POLR2E-207ENST00000590060 TEX14Q8IWB6 1497 aa28.18■■■□□ 2.1
POLR2E-207ENST00000590060 INO80Q9ULG1 1556 aaPredicted RBP28.16■■■□□ 2.1
POLR2E-207ENST00000590060 ATP7AQ04656 1500 aa28.16■■■□□ 2.1
POLR2E-207ENST00000590060 POGZQ7Z3K3 1410 aa28.16■■■□□ 2.1
POLR2E-207ENST00000590060 ERBINQ96RT1 1412 aa28.15■■■□□ 2.1
POLR2E-207ENST00000590060 DENND4BO75064 1496 aaPredicted RBP28.11■■■□□ 2.09
POLR2E-207ENST00000590060 MYT1LQ9UL68 1186 aa28.11■■■□□ 2.09
POLR2E-207ENST00000590060 AFAP1Q8N556 730 aa28.1■■■□□ 2.09
POLR2E-207ENST00000590060 KDM5CP41229 1560 aa28.09■■■□□ 2.09
POLR2E-207ENST00000590060 KDM5DQ9BY66 1539 aa28.08■■■□□ 2.09
POLR2E-207ENST00000590060 HECW2Q9P2P5 1572 aa28.06■■■□□ 2.08
POLR2E-207ENST00000590060 MPHOSPH9Q99550 1183 aa28.05■■■□□ 2.08
POLR2E-207ENST00000590060 UNC13BO14795 1591 aa28.03■■■□□ 2.08
POLR2E-207ENST00000590060 MLH3Q9UHC1 1453 aa28.03■■■□□ 2.08
POLR2E-207ENST00000590060 SLC4A1APQ9BWU0 796 aaKnown RBP28.03■■■□□ 2.08
POLR2E-207ENST00000590060 KIF13AQ9H1H9 1805 aa28.02■■■□□ 2.08
POLR2E-207ENST00000590060 NUP155O75694 1391 aa28.01■■■□□ 2.07
POLR2E-207ENST00000590060 PZPP20742 1482 aa28.01■■■□□ 2.07
POLR2E-207ENST00000590060 EIF2AK4Q9P2K8 1649 aaKnown RBP27.99■■■□□ 2.07
POLR2E-207ENST00000590060 TSPOAP1O95153 1857 aa27.98■■■□□ 2.07
POLR2E-207ENST00000590060 PPRC1Q5VV67 1664 aaKnown RBP27.98■■■□□ 2.07
POLR2E-207ENST00000590060 KIDINS220Q9ULH0 1771 aa27.98■■■□□ 2.07
POLR2E-207ENST00000590060 RICTORQ6R327 1708 aa27.96■■■□□ 2.07
POLR2E-207ENST00000590060 TIMELESSQ9UNS1 1208 aa27.96■■■□□ 2.07
POLR2E-207ENST00000590060 MAGI2Q86UL8 1455 aa27.95■■■□□ 2.06
POLR2E-207ENST00000590060 DNAJC5Q9H3Z4 198 aa27.94■■■□□ 2.06
POLR2E-207ENST00000590060 DHX29Q7Z478 1369 aaKnown RBP27.93■■■□□ 2.06
POLR2E-207ENST00000590060 FAM135AQ9P2D6 1515 aa27.92■■■□□ 2.06
POLR2E-207ENST00000590060 A2MP01023 1474 aa27.91■■■□□ 2.06
POLR2E-207ENST00000590060 IQGAP3Q86VI3 1631 aa27.91■■■□□ 2.06
POLR2E-207ENST00000590060 ZMYM4Q5VZL5 1548 aa27.91■■■□□ 2.06
POLR2E-207ENST00000590060 TONSLQ96HA7 1378 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms