RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 CDC42BPBQ9Y5S2 1711 aa24.32■■□□□ 1.48
NFIX-212ENST00000590027 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
NFIX-212ENST00000590027 SCAPERQ9BY12 1400 aa24.29■■□□□ 1.48
NFIX-212ENST00000590027 ZFYVE16Q7Z3T8 1539 aa24.28■■□□□ 1.48
NFIX-212ENST00000590027 CDC42BPAQ5VT25 1732 aa24.27■■□□□ 1.48
NFIX-212ENST00000590027 EFCAB2Q5VUJ9 269 aa24.26■■□□□ 1.47
NFIX-212ENST00000590027 BCORL1Q5H9F3 1711 aa24.25■■□□□ 1.47
NFIX-212ENST00000590027 YEATS2Q9ULM3 1422 aa24.25■■□□□ 1.47
NFIX-212ENST00000590027 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
NFIX-212ENST00000590027 SIGLEC1Q9BZZ2 1709 aa24.22■■□□□ 1.47
NFIX-212ENST00000590027 MAGI2Q86UL8 1455 aa24.22■■□□□ 1.47
NFIX-212ENST00000590027 ABCC1P33527 1531 aa24.21■■□□□ 1.47
NFIX-212ENST00000590027 KDM5CP41229 1560 aa24.2■■□□□ 1.47
NFIX-212ENST00000590027 ITSN2Q9NZM3 1697 aa24.2■■□□□ 1.46
NFIX-212ENST00000590027 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
NFIX-212ENST00000590027 MADDQ8WXG6 1647 aa24.19■■□□□ 1.46
NFIX-212ENST00000590027 LOC105371045A0A1W2PR82 267 aa24.18■■□□□ 1.46
NFIX-212ENST00000590027 EHBP1L1Q8N3D4 1523 aa24.17■■□□□ 1.46
NFIX-212ENST00000590027 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
NFIX-212ENST00000590027 ARID4BQ4LE39 1312 aaPredicted RBP24.15■■□□□ 1.46
NFIX-212ENST00000590027 MTUS2Q5JR59 1369 aa24.15■■□□□ 1.46
NFIX-212ENST00000590027 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.45
NFIX-212ENST00000590027 ARHGEF12Q9NZN5 1544 aa24.14■■□□□ 1.45
NFIX-212ENST00000590027 GPATCH8Q9UKJ3 1502 aaKnown RBP24.13■■□□□ 1.45
NFIX-212ENST00000590027 RIMS1Q86UR5 1692 aaKnown RBP24.11■■□□□ 1.45
NFIX-212ENST00000590027 PTPRMP28827 1452 aa24.11■■□□□ 1.45
NFIX-212ENST00000590027 C9orf84Q5VXU9 1444 aa24.1■■□□□ 1.45
NFIX-212ENST00000590027 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
NFIX-212ENST00000590027 DIP2CQ9Y2E4 1556 aa24.1■■□□□ 1.45
NFIX-212ENST00000590027 ABCA6Q8N139 1617 aa24.1■■□□□ 1.45
NFIX-212ENST00000590027 TRAPPC8Q9Y2L5 1435 aa24.1■■□□□ 1.45
NFIX-212ENST00000590027 SYCP2Q9BX26 1530 aa24.09■■□□□ 1.45
NFIX-212ENST00000590027 VPS8Q8N3P4 1428 aa24.09■■□□□ 1.45
NFIX-212ENST00000590027 ATP10AO60312 1499 aa24.08■■□□□ 1.45
NFIX-212ENST00000590027 AFAP1Q8N556 730 aa24.08■■□□□ 1.45
NFIX-212ENST00000590027 CCNB3Q8WWL7 1395 aa24.06■■□□□ 1.44
NFIX-212ENST00000590027 FER1L4A9Z1Z3 1794 aa24.05■■□□□ 1.44
NFIX-212ENST00000590027 MLH3Q9UHC1 1453 aa24.05■■□□□ 1.44
NFIX-212ENST00000590027 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
NFIX-212ENST00000590027 SUPT6HQ7KZ85 1726 aaKnown RBP24.03■■□□□ 1.44
NFIX-212ENST00000590027 REREQ9P2R6 1566 aa24.03■■□□□ 1.44
NFIX-212ENST00000590027 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
NFIX-212ENST00000590027 MYT1LQ9UL68 1186 aa23.99■■□□□ 1.43
NFIX-212ENST00000590027 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
NFIX-212ENST00000590027 MLECQ14165 292 aa23.98■■□□□ 1.43
NFIX-212ENST00000590027 CFDP1Q9UEE9 299 aaPredicted RBP23.98■■□□□ 1.43
NFIX-212ENST00000590027 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
NFIX-212ENST00000590027 KIAA1107Q9UPP5 1409 aa23.96■■□□□ 1.43
NFIX-212ENST00000590027 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.43
NFIX-212ENST00000590027 ATP7AQ04656 1500 aa23.94■■□□□ 1.42
NFIX-212ENST00000590027 LRRC9Q6ZRR7 1453 aa23.93■■□□□ 1.42
NFIX-212ENST00000590027 HNRNPMP52272 730 aaKnown RBP eCLIP23.92■■□□□ 1.42
NFIX-212ENST00000590027 AGLP35573 1532 aa23.92■■□□□ 1.42
NFIX-212ENST00000590027 MAP3K1Q13233 1512 aa23.9■■□□□ 1.42
NFIX-212ENST00000590027 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
NFIX-212ENST00000590027 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
NFIX-212ENST00000590027 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
NFIX-212ENST00000590027 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
NFIX-212ENST00000590027 PLPPR3Q6T4P5 718 aa23.86■■□□□ 1.41
NFIX-212ENST00000590027 LMTK3Q96Q04 1460 aa23.86■■□□□ 1.41
NFIX-212ENST00000590027 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
NFIX-212ENST00000590027 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
NFIX-212ENST00000590027 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
NFIX-212ENST00000590027 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
NFIX-212ENST00000590027 A2MP01023 1474 aa23.79■■□□□ 1.4
NFIX-212ENST00000590027 C3P01024 1663 aa23.79■■□□□ 1.4
NFIX-212ENST00000590027 ARHGEF5Q12774 1597 aa23.78■■□□□ 1.4
NFIX-212ENST00000590027 PREX1Q8TCU6 1659 aa23.76■■□□□ 1.39
NFIX-212ENST00000590027 RTEL1-TNFRSF6BF6WH68 1400 aa23.74■■□□□ 1.39
NFIX-212ENST00000590027 MYOM3Q5VTT5 1437 aa23.74■■□□□ 1.39
NFIX-212ENST00000590027 CEBPAP49715 358 aaPredicted RBP23.73■■□□□ 1.39
NFIX-212ENST00000590027 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
NFIX-212ENST00000590027 CNTLNQ9NXG0 1405 aa23.71■■□□□ 1.39
NFIX-212ENST00000590027 CLTCQ00610 1675 aaKnown RBP23.69■■□□□ 1.38
NFIX-212ENST00000590027 MIA2Q96PC5 1412 aa23.68■■□□□ 1.38
NFIX-212ENST00000590027 APLP2Q06481 763 aa23.68■■□□□ 1.38
NFIX-212ENST00000590027 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
NFIX-212ENST00000590027 HSPA2P54652 639 aa23.67■■□□□ 1.38
NFIX-212ENST00000590027 MAST1Q9Y2H9 1570 aa23.66■■□□□ 1.38
NFIX-212ENST00000590027 RSPH4AQ5TD94 716 aa23.64■■□□□ 1.37
NFIX-212ENST00000590027 PTPN23Q9H3S7 1636 aa23.63■■□□□ 1.37
NFIX-212ENST00000590027 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
NFIX-212ENST00000590027 SETD1BQ9UPS6 1966 aaKnown RBP23.63■■□□□ 1.37
NFIX-212ENST00000590027 DHX29Q7Z478 1369 aaKnown RBP23.63■■□□□ 1.37
NFIX-212ENST00000590027 CROCC2H7BZ55 1655 aa23.62■■□□□ 1.37
NFIX-212ENST00000590027 GGT6Q6P531 493 aa23.59■■□□□ 1.37
NFIX-212ENST00000590027 TSPY4P0CV99 314 aa23.57■■□□□ 1.36
NFIX-212ENST00000590027 TSPY10P0CW01 314 aa23.57■■□□□ 1.36
NFIX-212ENST00000590027 FGD6Q6ZV73 1430 aa23.57■■□□□ 1.36
NFIX-212ENST00000590027 ZMYM3Q14202 1370 aa23.56■■□□□ 1.36
NFIX-212ENST00000590027 NPATQ14207 1427 aa23.56■■□□□ 1.36
NFIX-212ENST00000590027 TCOF1Q13428 1488 aaKnown RBP23.55■■□□□ 1.36
NFIX-212ENST00000590027 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
NFIX-212ENST00000590027 FAM135AQ9P2D6 1515 aa23.54■■□□□ 1.36
NFIX-212ENST00000590027 MYO3AQ8NEV4 1616 aa23.54■■□□□ 1.36
NFIX-212ENST00000590027 SHANK2Q9UPX8 1470 aa23.54■■□□□ 1.36
NFIX-212ENST00000590027 KDM5DQ9BY66 1539 aa23.54■■□□□ 1.36
NFIX-212ENST00000590027 RNF17Q9BXT8 1623 aaKnown RBP23.53■■□□□ 1.36
NFIX-212ENST00000590027 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
NFIX-212ENST00000590027 KIF3BO15066 747 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms