RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-215ENST00000589536 SCAPERQ9BY12 1400 aa39.89■■■■□ 3.98
GRN-215ENST00000589536 MAGI2Q86UL8 1455 aa39.86■■■■□ 3.97
GRN-215ENST00000589536 ZFYVE16Q7Z3T8 1539 aa39.86■■■■□ 3.97
GRN-215ENST00000589536 EFCAB2Q5VUJ9 269 aa39.85■■■■□ 3.97
GRN-215ENST00000589536 YEATS2Q9ULM3 1422 aa39.84■■■■□ 3.97
GRN-215ENST00000589536 PTPRMP28827 1452 aa39.83■■■■□ 3.97
GRN-215ENST00000589536 FYCO1Q9BQS8 1478 aa39.83■■■■□ 3.97
GRN-215ENST00000589536 ARID4BQ4LE39 1312 aaPredicted RBP39.83■■■■□ 3.97
GRN-215ENST00000589536 MADDQ8WXG6 1647 aa39.8■■■■□ 3.96
GRN-215ENST00000589536 ARHGAP5Q13017 1502 aa39.79■■■■□ 3.96
GRN-215ENST00000589536 SIGLEC1Q9BZZ2 1709 aa39.76■■■■□ 3.96
GRN-215ENST00000589536 CDC42BPBQ9Y5S2 1711 aa39.71■■■■□ 3.95
GRN-215ENST00000589536 PREX2Q70Z35 1606 aa39.69■■■■□ 3.94
GRN-215ENST00000589536 ZNF518AQ6AHZ1 1483 aa39.68■■■■□ 3.94
GRN-215ENST00000589536 KDM5CP41229 1560 aa39.66■■■■□ 3.94
GRN-215ENST00000589536 RIMS1Q86UR5 1692 aaKnown RBP39.63■■■■□ 3.93
GRN-215ENST00000589536 ATP10AO60312 1499 aa39.62■■■■□ 3.93
GRN-215ENST00000589536 C9orf84Q5VXU9 1444 aa39.59■■■■□ 3.93
GRN-215ENST00000589536 ABCC1P33527 1531 aa39.59■■■■□ 3.93
GRN-215ENST00000589536 CDC42BPAQ5VT25 1732 aa39.58■■■■□ 3.93
GRN-215ENST00000589536 AFAP1Q8N556 730 aa39.58■■■■□ 3.93
GRN-215ENST00000589536 ARHGEF12Q9NZN5 1544 aa39.54■■■■□ 3.92
GRN-215ENST00000589536 ITSN2Q9NZM3 1697 aa39.51■■■■□ 3.91
GRN-215ENST00000589536 TRAPPC8Q9Y2L5 1435 aa39.49■■■■□ 3.91
GRN-215ENST00000589536 CEP162Q5TB80 1403 aa39.48■■■■□ 3.91
GRN-215ENST00000589536 DIP2CQ9Y2E4 1556 aa39.48■■■■□ 3.91
GRN-215ENST00000589536 MLH3Q9UHC1 1453 aa39.48■■■■□ 3.91
GRN-215ENST00000589536 MLECQ14165 292 aa39.47■■■■□ 3.91
GRN-215ENST00000589536 FER1L4A9Z1Z3 1794 aa39.46■■■■□ 3.91
GRN-215ENST00000589536 GPATCH8Q9UKJ3 1502 aaKnown RBP39.45■■■■□ 3.91
GRN-215ENST00000589536 LMTK3Q96Q04 1460 aa39.44■■■■□ 3.9
GRN-215ENST00000589536 ABCA6Q8N139 1617 aa39.43■■■■□ 3.9
GRN-215ENST00000589536 REREQ9P2R6 1566 aa39.43■■■■□ 3.9
GRN-215ENST00000589536 SAMD9LQ8IVG5 1584 aa39.41■■■■□ 3.9
GRN-215ENST00000589536 MYT1LQ9UL68 1186 aa39.37■■■■□ 3.89
GRN-215ENST00000589536 MTUS2Q5JR59 1369 aa39.36■■■■□ 3.89
GRN-215ENST00000589536 KIDINS220Q9ULH0 1771 aa39.33■■■■□ 3.89
GRN-215ENST00000589536 SYCP2Q9BX26 1530 aa39.33■■■■□ 3.89
GRN-215ENST00000589536 PLPPR3Q6T4P5 718 aa39.31■■■■□ 3.88
GRN-215ENST00000589536 ZNF777Q9ULD5 760 aaPredicted RBP39.31■■■■□ 3.88
GRN-215ENST00000589536 EHBP1L1Q8N3D4 1523 aa39.3■■■■□ 3.88
GRN-215ENST00000589536 CCNB3Q8WWL7 1395 aa39.3■■■■□ 3.88
GRN-215ENST00000589536 AGLP35573 1532 aa39.29■■■■□ 3.88
GRN-215ENST00000589536 KIAA1107Q9UPP5 1409 aa39.26■■■■□ 3.88
GRN-215ENST00000589536 CFDP1Q9UEE9 299 aaPredicted RBP39.26■■■■□ 3.88
GRN-215ENST00000589536 ILDR1Q86SU0 546 aaPredicted RBP39.25■■■■□ 3.87
GRN-215ENST00000589536 PLEKHH2Q8IVE3 1493 aa39.24■■■■□ 3.87
GRN-215ENST00000589536 TIAM1Q13009 1591 aa39.24■■■■□ 3.87
GRN-215ENST00000589536 HNRNPMP52272 730 aaKnown RBP eCLIP39.21■■■■□ 3.87
GRN-215ENST00000589536 SPAG9O60271 1321 aaKnown RBP39.15■■■■□ 3.86
GRN-215ENST00000589536 LOC105371045A0A1W2PR82 267 aa39.15■■■■□ 3.86
GRN-215ENST00000589536 HSPA2P54652 639 aa39.15■■■■□ 3.86
GRN-215ENST00000589536 INO80Q9ULG1 1556 aaPredicted RBP39.14■■■■□ 3.86
GRN-215ENST00000589536 CEBPAP49715 358 aaPredicted RBP39.14■■■■□ 3.86
GRN-215ENST00000589536 ATP7AQ04656 1500 aa39.14■■■■□ 3.86
GRN-215ENST00000589536 PREX1Q8TCU6 1659 aa39.1■■■■□ 3.85
GRN-215ENST00000589536 ZNF644Q9H582 1327 aaPredicted RBP39.08■■■■□ 3.85
GRN-215ENST00000589536 VPS8Q8N3P4 1428 aa39.07■■■■□ 3.85
GRN-215ENST00000589536 MBD5Q9P267 1494 aa39.05■■■■□ 3.84
GRN-215ENST00000589536 C3P01024 1663 aa39.05■■■■□ 3.84
GRN-215ENST00000589536 NCOA2Q15596 1464 aa39.05■■■■□ 3.84
GRN-215ENST00000589536 PLXNC1O60486 1568 aa39.04■■■■□ 3.84
GRN-215ENST00000589536 SUPT6HQ7KZ85 1726 aaKnown RBP39.04■■■■□ 3.84
GRN-215ENST00000589536 CNTLNQ9NXG0 1405 aa39■■■■□ 3.83
GRN-215ENST00000589536 A2MP01023 1474 aa38.99■■■■□ 3.83
GRN-215ENST00000589536 ESF1Q9H501 851 aaKnown RBP38.98■■■■□ 3.83
GRN-215ENST00000589536 UHRF1BP1Q6BDS2 1440 aa38.95■■■■□ 3.83
GRN-215ENST00000589536 SETD1BQ9UPS6 1966 aaKnown RBP38.94■■■■□ 3.82
GRN-215ENST00000589536 LRRC9Q6ZRR7 1453 aa38.92■■■■□ 3.82
GRN-215ENST00000589536 ADGBQ8N7X0 1667 aa38.92■■■■□ 3.82
GRN-215ENST00000589536 CAMSAP2Q08AD1 1489 aa38.91■■■■□ 3.82
GRN-215ENST00000589536 MROH2AA6NES4 1674 aa38.9■■■■□ 3.82
GRN-215ENST00000589536 RTEL1-TNFRSF6BF6WH68 1400 aa38.9■■■■□ 3.82
GRN-215ENST00000589536 CCDC141Q6ZP82 1450 aa38.86■■■■□ 3.81
GRN-215ENST00000589536 MAP3K1Q13233 1512 aa38.86■■■■□ 3.81
GRN-215ENST00000589536 FBXO41Q8TF61 875 aa38.81■■■■□ 3.8
GRN-215ENST00000589536 ZMYM3Q14202 1370 aa38.81■■■■□ 3.8
GRN-215ENST00000589536 NPATQ14207 1427 aa38.8■■■■□ 3.8
GRN-215ENST00000589536 CLTCQ00610 1675 aaKnown RBP38.8■■■■□ 3.8
GRN-215ENST00000589536 STRCQ7RTU9 1775 aa38.8■■■■□ 3.8
GRN-215ENST00000589536 ARHGEF5Q12774 1597 aa38.77■■■■□ 3.8
GRN-215ENST00000589536 KANK4Q5T7N3 995 aaPredicted RBP38.76■■■■□ 3.8
GRN-215ENST00000589536 RSPH4AQ5TD94 716 aa38.76■■■■□ 3.8
GRN-215ENST00000589536 DHX29Q7Z478 1369 aaKnown RBP38.76■■■■□ 3.8
GRN-215ENST00000589536 GGT6Q6P531 493 aa38.75■■■■□ 3.79
GRN-215ENST00000589536 PPP6R1Q9UPN7 881 aa38.71■■■■□ 3.79
GRN-215ENST00000589536 PTPRKQ15262 1439 aa38.66■■■■□ 3.78
GRN-215ENST00000589536 DMRT2Q9Y5R5 561 aa38.65■■■■□ 3.78
GRN-215ENST00000589536 MYOM3Q5VTT5 1437 aa38.63■■■■□ 3.78
GRN-215ENST00000589536 MIA2Q96PC5 1412 aa38.63■■■■□ 3.77
GRN-215ENST00000589536 NCOA1Q15788 1441 aa38.61■■■■□ 3.77
GRN-215ENST00000589536 MYO3AQ8NEV4 1616 aa38.6■■■■□ 3.77
GRN-215ENST00000589536 TSPY4P0CV99 314 aa38.59■■■■□ 3.77
GRN-215ENST00000589536 TSPY10P0CW01 314 aa38.59■■■■□ 3.77
GRN-215ENST00000589536 MAST1Q9Y2H9 1570 aa38.59■■■■□ 3.77
GRN-215ENST00000589536 PTPRTO14522 1441 aa38.58■■■■□ 3.77
GRN-215ENST00000589536 KIF3BO15066 747 aa38.58■■■■□ 3.77
GRN-215ENST00000589536 CERKQ8TCT0 537 aa38.57■■■■□ 3.76
GRN-215ENST00000589536 ZNF142P52746 1687 aaPredicted RBP38.57■■■■□ 3.76
GRN-215ENST00000589536 FAM135AQ9P2D6 1515 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms