RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 ZFYVE16Q7Z3T8 1539 aa23.82■■□□□ 1.4
DNMT1-217ENST00000589091 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
DNMT1-217ENST00000589091 FYCO1Q9BQS8 1478 aa23.81■■□□□ 1.4
DNMT1-217ENST00000589091 PREX2Q70Z35 1606 aa23.79■■□□□ 1.4
DNMT1-217ENST00000589091 POGZQ7Z3K3 1410 aa23.78■■□□□ 1.4
DNMT1-217ENST00000589091 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
DNMT1-217ENST00000589091 MADDQ8WXG6 1647 aa23.78■■□□□ 1.4
DNMT1-217ENST00000589091 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
DNMT1-217ENST00000589091 EFCAB2Q5VUJ9 269 aa23.77■■□□□ 1.4
DNMT1-217ENST00000589091 CDC42BPAQ5VT25 1732 aa23.76■■□□□ 1.39
DNMT1-217ENST00000589091 ARID4BQ4LE39 1312 aaPredicted RBP23.75■■□□□ 1.39
DNMT1-217ENST00000589091 RIMS1Q86UR5 1692 aaKnown RBP23.74■■□□□ 1.39
DNMT1-217ENST00000589091 PTPRMP28827 1452 aa23.74■■□□□ 1.39
DNMT1-217ENST00000589091 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
DNMT1-217ENST00000589091 ZNF518AQ6AHZ1 1483 aa23.71■■□□□ 1.39
DNMT1-217ENST00000589091 YEATS2Q9ULM3 1422 aa23.71■■□□□ 1.39
DNMT1-217ENST00000589091 FER1L4A9Z1Z3 1794 aa23.7■■□□□ 1.39
DNMT1-217ENST00000589091 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.39
DNMT1-217ENST00000589091 KDM5CP41229 1560 aa23.7■■□□□ 1.38
DNMT1-217ENST00000589091 ABCC1P33527 1531 aa23.65■■□□□ 1.38
DNMT1-217ENST00000589091 ATP10AO60312 1499 aa23.64■■□□□ 1.38
DNMT1-217ENST00000589091 C9orf84Q5VXU9 1444 aa23.64■■□□□ 1.37
DNMT1-217ENST00000589091 REREQ9P2R6 1566 aa23.6■■□□□ 1.37
DNMT1-217ENST00000589091 DIP2CQ9Y2E4 1556 aa23.59■■□□□ 1.37
DNMT1-217ENST00000589091 ABCA6Q8N139 1617 aa23.57■■□□□ 1.36
DNMT1-217ENST00000589091 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
DNMT1-217ENST00000589091 MLH3Q9UHC1 1453 aa23.56■■□□□ 1.36
DNMT1-217ENST00000589091 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
DNMT1-217ENST00000589091 KIDINS220Q9ULH0 1771 aa23.55■■□□□ 1.36
DNMT1-217ENST00000589091 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
DNMT1-217ENST00000589091 AFAP1Q8N556 730 aa23.54■■□□□ 1.36
DNMT1-217ENST00000589091 EHBP1L1Q8N3D4 1523 aa23.54■■□□□ 1.36
DNMT1-217ENST00000589091 MYT1LQ9UL68 1186 aa23.52■■□□□ 1.36
DNMT1-217ENST00000589091 GPATCH8Q9UKJ3 1502 aaKnown RBP23.52■■□□□ 1.36
DNMT1-217ENST00000589091 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
DNMT1-217ENST00000589091 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
DNMT1-217ENST00000589091 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
DNMT1-217ENST00000589091 MLECQ14165 292 aa23.49■■□□□ 1.35
DNMT1-217ENST00000589091 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
DNMT1-217ENST00000589091 LMTK3Q96Q04 1460 aa23.49■■□□□ 1.35
DNMT1-217ENST00000589091 SETD1BQ9UPS6 1966 aaKnown RBP23.49■■□□□ 1.35
DNMT1-217ENST00000589091 AGLP35573 1532 aa23.48■■□□□ 1.35
DNMT1-217ENST00000589091 CCNB3Q8WWL7 1395 aa23.47■■□□□ 1.35
DNMT1-217ENST00000589091 PREX1Q8TCU6 1659 aa23.47■■□□□ 1.35
DNMT1-217ENST00000589091 TIAM1Q13009 1591 aa23.46■■□□□ 1.35
DNMT1-217ENST00000589091 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.34
DNMT1-217ENST00000589091 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
DNMT1-217ENST00000589091 ZNF777Q9ULD5 760 aaPredicted RBP23.43■■□□□ 1.34
DNMT1-217ENST00000589091 INO80Q9ULG1 1556 aaPredicted RBP23.41■■□□□ 1.34
DNMT1-217ENST00000589091 CFDP1Q9UEE9 299 aaPredicted RBP23.41■■□□□ 1.34
DNMT1-217ENST00000589091 ATP7AQ04656 1500 aa23.4■■□□□ 1.34
DNMT1-217ENST00000589091 C3P01024 1663 aa23.4■■□□□ 1.34
DNMT1-217ENST00000589091 ADGBQ8N7X0 1667 aa23.39■■□□□ 1.34
DNMT1-217ENST00000589091 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
DNMT1-217ENST00000589091 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
DNMT1-217ENST00000589091 SPAG9O60271 1321 aaKnown RBP23.35■■□□□ 1.33
DNMT1-217ENST00000589091 HNRNPMP52272 730 aaKnown RBP eCLIP23.34■■□□□ 1.33
DNMT1-217ENST00000589091 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.33
DNMT1-217ENST00000589091 PLXNC1O60486 1568 aa23.32■■□□□ 1.32
DNMT1-217ENST00000589091 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
DNMT1-217ENST00000589091 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
DNMT1-217ENST00000589091 NCOA2Q15596 1464 aa23.3■■□□□ 1.32
DNMT1-217ENST00000589091 ILDR1Q86SU0 546 aaPredicted RBP23.29■■□□□ 1.32
DNMT1-217ENST00000589091 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
DNMT1-217ENST00000589091 A2MP01023 1474 aa23.27■■□□□ 1.32
DNMT1-217ENST00000589091 MAP3K1Q13233 1512 aa23.27■■□□□ 1.32
DNMT1-217ENST00000589091 MBD5Q9P267 1494 aa23.26■■□□□ 1.31
DNMT1-217ENST00000589091 CEBPAP49715 358 aaPredicted RBP23.26■■□□□ 1.31
DNMT1-217ENST00000589091 HSPA2P54652 639 aa23.26■■□□□ 1.31
DNMT1-217ENST00000589091 CLTCQ00610 1675 aaKnown RBP23.25■■□□□ 1.31
DNMT1-217ENST00000589091 UHRF1BP1Q6BDS2 1440 aa23.25■■□□□ 1.31
DNMT1-217ENST00000589091 RTEL1-TNFRSF6BF6WH68 1400 aa23.25■■□□□ 1.31
DNMT1-217ENST00000589091 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
DNMT1-217ENST00000589091 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
DNMT1-217ENST00000589091 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
DNMT1-217ENST00000589091 ZNF644Q9H582 1327 aaPredicted RBP23.22■■□□□ 1.31
DNMT1-217ENST00000589091 CCDC141Q6ZP82 1450 aa23.22■■□□□ 1.31
DNMT1-217ENST00000589091 ARHGEF5Q12774 1597 aa23.22■■□□□ 1.31
DNMT1-217ENST00000589091 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
DNMT1-217ENST00000589091 NPATQ14207 1427 aa23.16■■□□□ 1.3
DNMT1-217ENST00000589091 ZNF142P52746 1687 aaPredicted RBP23.13■■□□□ 1.29
DNMT1-217ENST00000589091 PPP6R1Q9UPN7 881 aa23.13■■□□□ 1.29
DNMT1-217ENST00000589091 ZMYM3Q14202 1370 aa23.13■■□□□ 1.29
DNMT1-217ENST00000589091 FAM135AQ9P2D6 1515 aa23.12■■□□□ 1.29
DNMT1-217ENST00000589091 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
DNMT1-217ENST00000589091 MAST1Q9Y2H9 1570 aa23.11■■□□□ 1.29
DNMT1-217ENST00000589091 FBXO41Q8TF61 875 aa23.11■■□□□ 1.29
DNMT1-217ENST00000589091 MYO3AQ8NEV4 1616 aa23.11■■□□□ 1.29
DNMT1-217ENST00000589091 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
DNMT1-217ENST00000589091 GGT6Q6P531 493 aa23.09■■□□□ 1.29
DNMT1-217ENST00000589091 MIA2Q96PC5 1412 aa23.08■■□□□ 1.29
DNMT1-217ENST00000589091 MYOM3Q5VTT5 1437 aa23.08■■□□□ 1.28
DNMT1-217ENST00000589091 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
DNMT1-217ENST00000589091 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
DNMT1-217ENST00000589091 CROCC2H7BZ55 1655 aa23.05■■□□□ 1.28
DNMT1-217ENST00000589091 EIF2AK4Q9P2K8 1649 aaKnown RBP23.04■■□□□ 1.28
DNMT1-217ENST00000589091 APLP2Q06481 763 aa23.04■■□□□ 1.28
DNMT1-217ENST00000589091 KANK4Q5T7N3 995 aaPredicted RBP23.04■■□□□ 1.28
DNMT1-217ENST00000589091 KDM5DQ9BY66 1539 aa23.03■■□□□ 1.28
DNMT1-217ENST00000589091 PTPRKQ15262 1439 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms