RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 BCORL1Q5H9F3 1711 aa31.11■■■□□ 2.57
CCDC130-209ENST00000588809 POGZQ7Z3K3 1410 aa31.1■■■□□ 2.57
CCDC130-209ENST00000588809 CDC42BPAQ5VT25 1732 aa31.1■■■□□ 2.57
CCDC130-209ENST00000588809 MAGI2Q86UL8 1455 aa31.09■■■□□ 2.57
CCDC130-209ENST00000588809 ARHGAP5Q13017 1502 aa31.08■■■□□ 2.57
CCDC130-209ENST00000588809 SCAPERQ9BY12 1400 aa31.08■■■□□ 2.57
CCDC130-209ENST00000588809 EFCAB2Q5VUJ9 269 aa31.07■■■□□ 2.56
CCDC130-209ENST00000588809 ZFYVE16Q7Z3T8 1539 aa31.07■■■□□ 2.56
CCDC130-209ENST00000588809 CEP162Q5TB80 1403 aa31.06■■■□□ 2.56
CCDC130-209ENST00000588809 SIGLEC1Q9BZZ2 1709 aa31.03■■■□□ 2.56
CCDC130-209ENST00000588809 KDM5CP41229 1560 aa31■■■□□ 2.55
CCDC130-209ENST00000588809 YEATS2Q9ULM3 1422 aa30.99■■■□□ 2.55
CCDC130-209ENST00000588809 ZNF518AQ6AHZ1 1483 aa30.99■■■□□ 2.55
CCDC130-209ENST00000588809 ITSN2Q9NZM3 1697 aa30.97■■■□□ 2.55
CCDC130-209ENST00000588809 MADDQ8WXG6 1647 aa30.97■■■□□ 2.55
CCDC130-209ENST00000588809 ABCC1P33527 1531 aa30.97■■■□□ 2.55
CCDC130-209ENST00000588809 HECW2Q9P2P5 1572 aa30.92■■■□□ 2.54
CCDC130-209ENST00000588809 PTPRMP28827 1452 aa30.91■■■□□ 2.54
CCDC130-209ENST00000588809 ARID4BQ4LE39 1312 aaPredicted RBP30.89■■■□□ 2.54
CCDC130-209ENST00000588809 ARHGEF12Q9NZN5 1544 aa30.88■■■□□ 2.53
CCDC130-209ENST00000588809 RIMS1Q86UR5 1692 aaKnown RBP30.87■■■□□ 2.53
CCDC130-209ENST00000588809 ATP10AO60312 1499 aa30.87■■■□□ 2.53
CCDC130-209ENST00000588809 GPATCH8Q9UKJ3 1502 aaKnown RBP30.87■■■□□ 2.53
CCDC130-209ENST00000588809 EHBP1L1Q8N3D4 1523 aa30.86■■■□□ 2.53
CCDC130-209ENST00000588809 SAMD9LQ8IVG5 1584 aa30.86■■■□□ 2.53
CCDC130-209ENST00000588809 C9orf84Q5VXU9 1444 aa30.84■■■□□ 2.53
CCDC130-209ENST00000588809 FER1L4A9Z1Z3 1794 aa30.84■■■□□ 2.53
CCDC130-209ENST00000588809 DIP2CQ9Y2E4 1556 aa30.83■■■□□ 2.53
CCDC130-209ENST00000588809 MLH3Q9UHC1 1453 aa30.83■■■□□ 2.53
CCDC130-209ENST00000588809 REREQ9P2R6 1566 aa30.83■■■□□ 2.53
CCDC130-209ENST00000588809 MTUS2Q5JR59 1369 aa30.82■■■□□ 2.52
CCDC130-209ENST00000588809 AFAP1Q8N556 730 aa30.82■■■□□ 2.52
CCDC130-209ENST00000588809 ABCA6Q8N139 1617 aa30.82■■■□□ 2.52
CCDC130-209ENST00000588809 TRAPPC8Q9Y2L5 1435 aa30.81■■■□□ 2.52
CCDC130-209ENST00000588809 KIDINS220Q9ULH0 1771 aa30.8■■■□□ 2.52
CCDC130-209ENST00000588809 LOC105371045A0A1W2PR82 267 aa30.79■■■□□ 2.52
CCDC130-209ENST00000588809 TIAM1Q13009 1591 aa30.79■■■□□ 2.52
CCDC130-209ENST00000588809 SYCP2Q9BX26 1530 aa30.77■■■□□ 2.52
CCDC130-209ENST00000588809 CCNB3Q8WWL7 1395 aa30.74■■■□□ 2.51
CCDC130-209ENST00000588809 VPS8Q8N3P4 1428 aa30.73■■■□□ 2.51
CCDC130-209ENST00000588809 SUPT6HQ7KZ85 1726 aaKnown RBP30.73■■■□□ 2.51
CCDC130-209ENST00000588809 PLEKHH2Q8IVE3 1493 aa30.72■■■□□ 2.51
CCDC130-209ENST00000588809 KIAA1107Q9UPP5 1409 aa30.71■■■□□ 2.51
CCDC130-209ENST00000588809 AGLP35573 1532 aa30.68■■■□□ 2.5
CCDC130-209ENST00000588809 CFDP1Q9UEE9 299 aaPredicted RBP30.67■■■□□ 2.5
CCDC130-209ENST00000588809 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
CCDC130-209ENST00000588809 INO80Q9ULG1 1556 aaPredicted RBP30.66■■■□□ 2.5
CCDC130-209ENST00000588809 NCOA2Q15596 1464 aa30.62■■■□□ 2.49
CCDC130-209ENST00000588809 MAP3K1Q13233 1512 aa30.62■■■□□ 2.49
CCDC130-209ENST00000588809 MLECQ14165 292 aa30.61■■■□□ 2.49
CCDC130-209ENST00000588809 MYT1LQ9UL68 1186 aa30.61■■■□□ 2.49
CCDC130-209ENST00000588809 ATP7AQ04656 1500 aa30.61■■■□□ 2.49
CCDC130-209ENST00000588809 LMTK3Q96Q04 1460 aa30.59■■■□□ 2.49
CCDC130-209ENST00000588809 HNRNPMP52272 730 aaKnown RBP eCLIP30.59■■■□□ 2.49
CCDC130-209ENST00000588809 LRRC9Q6ZRR7 1453 aa30.57■■■□□ 2.48
CCDC130-209ENST00000588809 MBD5Q9P267 1494 aa30.55■■■□□ 2.48
CCDC130-209ENST00000588809 PLXNC1O60486 1568 aa30.54■■■□□ 2.48
CCDC130-209ENST00000588809 SPAG9O60271 1321 aaKnown RBP30.54■■■□□ 2.48
CCDC130-209ENST00000588809 ADGBQ8N7X0 1667 aa30.54■■■□□ 2.48
CCDC130-209ENST00000588809 ZNF644Q9H582 1327 aaPredicted RBP30.51■■■□□ 2.48
CCDC130-209ENST00000588809 C3P01024 1663 aa30.51■■■□□ 2.47
CCDC130-209ENST00000588809 PREX1Q8TCU6 1659 aa30.51■■■□□ 2.47
CCDC130-209ENST00000588809 SETD1BQ9UPS6 1966 aaKnown RBP30.5■■■□□ 2.47
CCDC130-209ENST00000588809 CAMSAP2Q08AD1 1489 aa30.49■■■□□ 2.47
CCDC130-209ENST00000588809 MROH2AA6NES4 1674 aa30.46■■■□□ 2.47
CCDC130-209ENST00000588809 A2MP01023 1474 aa30.44■■■□□ 2.46
CCDC130-209ENST00000588809 ARHGEF5Q12774 1597 aa30.44■■■□□ 2.46
CCDC130-209ENST00000588809 RTEL1-TNFRSF6BF6WH68 1400 aa30.43■■■□□ 2.46
CCDC130-209ENST00000588809 CCDC141Q6ZP82 1450 aa30.42■■■□□ 2.46
CCDC130-209ENST00000588809 CNTLNQ9NXG0 1405 aa30.39■■■□□ 2.46
CCDC130-209ENST00000588809 PLPPR3Q6T4P5 718 aa30.39■■■□□ 2.46
CCDC130-209ENST00000588809 KANK4Q5T7N3 995 aaPredicted RBP30.37■■■□□ 2.45
CCDC130-209ENST00000588809 CEBPAP49715 358 aaPredicted RBP30.35■■■□□ 2.45
CCDC130-209ENST00000588809 CLTCQ00610 1675 aaKnown RBP30.34■■■□□ 2.45
CCDC130-209ENST00000588809 RSPH4AQ5TD94 716 aa30.34■■■□□ 2.45
CCDC130-209ENST00000588809 MYOM3Q5VTT5 1437 aa30.32■■■□□ 2.44
CCDC130-209ENST00000588809 MIA2Q96PC5 1412 aa30.31■■■□□ 2.44
CCDC130-209ENST00000588809 ESF1Q9H501 851 aaKnown RBP30.3■■■□□ 2.44
CCDC130-209ENST00000588809 MAST1Q9Y2H9 1570 aa30.29■■■□□ 2.44
CCDC130-209ENST00000588809 HSPA2P54652 639 aa30.27■■■□□ 2.44
CCDC130-209ENST00000588809 UHRF1BP1Q6BDS2 1440 aa30.26■■■□□ 2.43
CCDC130-209ENST00000588809 DHX29Q7Z478 1369 aaKnown RBP30.26■■■□□ 2.43
CCDC130-209ENST00000588809 STRCQ7RTU9 1775 aa30.23■■■□□ 2.43
CCDC130-209ENST00000588809 NPATQ14207 1427 aa30.22■■■□□ 2.43
CCDC130-209ENST00000588809 CROCC2H7BZ55 1655 aa30.2■■■□□ 2.43
CCDC130-209ENST00000588809 ZMYM3Q14202 1370 aa30.2■■■□□ 2.43
CCDC130-209ENST00000588809 APLP2Q06481 763 aa30.2■■■□□ 2.43
CCDC130-209ENST00000588809 PPP6R1Q9UPN7 881 aa30.2■■■□□ 2.43
CCDC130-209ENST00000588809 FAM135AQ9P2D6 1515 aa30.2■■■□□ 2.42
CCDC130-209ENST00000588809 PTPN23Q9H3S7 1636 aa30.18■■■□□ 2.42
CCDC130-209ENST00000588809 TSPY4P0CV99 314 aa30.16■■■□□ 2.42
CCDC130-209ENST00000588809 TSPY10P0CW01 314 aa30.16■■■□□ 2.42
CCDC130-209ENST00000588809 GGT6Q6P531 493 aa30.16■■■□□ 2.42
CCDC130-209ENST00000588809 ZNF142P52746 1687 aaPredicted RBP30.15■■■□□ 2.42
CCDC130-209ENST00000588809 MYO3AQ8NEV4 1616 aa30.14■■■□□ 2.41
CCDC130-209ENST00000588809 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.41
CCDC130-209ENST00000588809 EIF2AK4Q9P2K8 1649 aaKnown RBP30.14■■■□□ 2.41
CCDC130-209ENST00000588809 KDM5DQ9BY66 1539 aa30.12■■■□□ 2.41
CCDC130-209ENST00000588809 PTPRKQ15262 1439 aa30.11■■■□□ 2.41
CCDC130-209ENST00000588809 DNMT1P26358 1616 aaKnown RBP30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms