RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 ARHGAP5Q13017 1502 aa24.23■■□□□ 1.47
GHDC-209ENST00000588762 PHLDB1Q86UU1 1377 aa24.22■■□□□ 1.47
GHDC-209ENST00000588762 ITSN2Q9NZM3 1697 aa24.21■■□□□ 1.47
GHDC-209ENST00000588762 NCOA2Q15596 1464 aa24.21■■□□□ 1.47
GHDC-209ENST00000588762 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
GHDC-209ENST00000588762 GPATCH8Q9UKJ3 1502 aaKnown RBP24.18■■□□□ 1.46
GHDC-209ENST00000588762 AKNAQ7Z591 1439 aa24.17■■□□□ 1.46
GHDC-209ENST00000588762 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
GHDC-209ENST00000588762 ADGRL1O94910 1474 aa24.12■■□□□ 1.45
GHDC-209ENST00000588762 COL17A1Q9UMD9 1497 aaPredicted RBP24.11■■□□□ 1.45
GHDC-209ENST00000588762 ZNF777Q9ULD5 760 aaPredicted RBP24.09■■□□□ 1.45
GHDC-209ENST00000588762 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
GHDC-209ENST00000588762 SCAPERQ9BY12 1400 aa24.07■■□□□ 1.44
GHDC-209ENST00000588762 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
GHDC-209ENST00000588762 RICTORQ6R327 1708 aa24.05■■□□□ 1.44
GHDC-209ENST00000588762 MYOM3Q5VTT5 1437 aa24.05■■□□□ 1.44
GHDC-209ENST00000588762 PLEKHH2Q8IVE3 1493 aa24.04■■□□□ 1.44
GHDC-209ENST00000588762 ABCC1P33527 1531 aa24.04■■□□□ 1.44
GHDC-209ENST00000588762 RAPGEF3O95398 923 aa24.03■■□□□ 1.44
GHDC-209ENST00000588762 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
GHDC-209ENST00000588762 FRMPD1Q5SYB0 1578 aa24.01■■□□□ 1.43
GHDC-209ENST00000588762 POGZQ7Z3K3 1410 aa24■■□□□ 1.43
GHDC-209ENST00000588762 MIA2Q96PC5 1412 aa24■■□□□ 1.43
GHDC-209ENST00000588762 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
GHDC-209ENST00000588762 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
GHDC-209ENST00000588762 CAMSAP2Q08AD1 1489 aa23.98■■□□□ 1.43
GHDC-209ENST00000588762 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
GHDC-209ENST00000588762 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
GHDC-209ENST00000588762 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
GHDC-209ENST00000588762 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.42
GHDC-209ENST00000588762 ZMYM4Q5VZL5 1548 aa23.94■■□□□ 1.42
GHDC-209ENST00000588762 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
GHDC-209ENST00000588762 PTPN23Q9H3S7 1636 aa23.93■■□□□ 1.42
GHDC-209ENST00000588762 TRAPPC8Q9Y2L5 1435 aa23.93■■□□□ 1.42
GHDC-209ENST00000588762 AFAP1Q8N556 730 aa23.92■■□□□ 1.42
GHDC-209ENST00000588762 KDM5CP41229 1560 aa23.91■■□□□ 1.42
GHDC-209ENST00000588762 MAGI2Q86UL8 1455 aa23.89■■□□□ 1.42
GHDC-209ENST00000588762 MYT1LQ9UL68 1186 aa23.89■■□□□ 1.41
GHDC-209ENST00000588762 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
GHDC-209ENST00000588762 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
GHDC-209ENST00000588762 ARHGEF5Q12774 1597 aa23.87■■□□□ 1.41
GHDC-209ENST00000588762 RSPH4AQ5TD94 716 aa23.87■■□□□ 1.41
GHDC-209ENST00000588762 ZFYVE16Q7Z3T8 1539 aa23.87■■□□□ 1.41
GHDC-209ENST00000588762 TCOF1Q13428 1488 aaKnown RBP23.86■■□□□ 1.41
GHDC-209ENST00000588762 CCDC141Q6ZP82 1450 aa23.85■■□□□ 1.41
GHDC-209ENST00000588762 SPAG9O60271 1321 aaKnown RBP23.84■■□□□ 1.41
GHDC-209ENST00000588762 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
GHDC-209ENST00000588762 MLH3Q9UHC1 1453 aa23.84■■□□□ 1.41
GHDC-209ENST00000588762 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
GHDC-209ENST00000588762 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
GHDC-209ENST00000588762 YEATS2Q9ULM3 1422 aa23.81■■□□□ 1.4
GHDC-209ENST00000588762 INO80Q9ULG1 1556 aaPredicted RBP23.8■■□□□ 1.4
GHDC-209ENST00000588762 ATP7AQ04656 1500 aa23.79■■□□□ 1.4
GHDC-209ENST00000588762 TSPY4P0CV99 314 aa23.79■■□□□ 1.4
GHDC-209ENST00000588762 TSPY10P0CW01 314 aa23.79■■□□□ 1.4
GHDC-209ENST00000588762 DNMT1P26358 1616 aaKnown RBP23.78■■□□□ 1.4
GHDC-209ENST00000588762 CROCC2H7BZ55 1655 aa23.78■■□□□ 1.4
GHDC-209ENST00000588762 ABCA6Q8N139 1617 aa23.77■■□□□ 1.4
GHDC-209ENST00000588762 ATP10AO60312 1499 aa23.76■■□□□ 1.39
GHDC-209ENST00000588762 DIP2CQ9Y2E4 1556 aa23.76■■□□□ 1.39
GHDC-209ENST00000588762 RTEL1-TNFRSF6BF6WH68 1400 aa23.76■■□□□ 1.39
GHDC-209ENST00000588762 DAPK1P53355 1430 aa23.74■■□□□ 1.39
GHDC-209ENST00000588762 MAST1Q9Y2H9 1570 aa23.74■■□□□ 1.39
GHDC-209ENST00000588762 ABCC5O15440 1437 aa23.72■■□□□ 1.39
GHDC-209ENST00000588762 C9orf84Q5VXU9 1444 aa23.72■■□□□ 1.39
GHDC-209ENST00000588762 ADGBQ8N7X0 1667 aa23.72■■□□□ 1.39
GHDC-209ENST00000588762 SHANK2Q9UPX8 1470 aa23.71■■□□□ 1.39
GHDC-209ENST00000588762 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
GHDC-209ENST00000588762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.71■■□□□ 1.39
GHDC-209ENST00000588762 ARID4BQ4LE39 1312 aaPredicted RBP23.69■■□□□ 1.38
GHDC-209ENST00000588762 REREQ9P2R6 1566 aa23.69■■□□□ 1.38
GHDC-209ENST00000588762 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
GHDC-209ENST00000588762 SIGLEC1Q9BZZ2 1709 aa23.65■■□□□ 1.38
GHDC-209ENST00000588762 A2MP01023 1474 aa23.64■■□□□ 1.38
GHDC-209ENST00000588762 ITGAEP38570 1179 aa23.62■■□□□ 1.37
GHDC-209ENST00000588762 CHIC2Q9UKJ5 165 aa23.62■■□□□ 1.37
GHDC-209ENST00000588762 ANKRD30AQ9BXX3 1397 aa23.61■■□□□ 1.37
GHDC-209ENST00000588762 AGLP35573 1532 aa23.6■■□□□ 1.37
GHDC-209ENST00000588762 BCORL1Q5H9F3 1711 aa23.6■■□□□ 1.37
GHDC-209ENST00000588762 DHX29Q7Z478 1369 aaKnown RBP23.59■■□□□ 1.37
GHDC-209ENST00000588762 ADGRL2O95490 1459 aa23.57■■□□□ 1.36
GHDC-209ENST00000588762 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
GHDC-209ENST00000588762 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
GHDC-209ENST00000588762 DUOX2Q9NRD8 1548 aa23.56■■□□□ 1.36
GHDC-209ENST00000588762 PTPRKQ15262 1439 aa23.55■■□□□ 1.36
GHDC-209ENST00000588762 NCOA1Q15788 1441 aa23.55■■□□□ 1.36
GHDC-209ENST00000588762 MLECQ14165 292 aa23.54■■□□□ 1.36
GHDC-209ENST00000588762 ADAMTSL3P82987 1691 aa23.53■■□□□ 1.36
GHDC-209ENST00000588762 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
GHDC-209ENST00000588762 EIF2AK4Q9P2K8 1649 aaKnown RBP23.51■■□□□ 1.35
GHDC-209ENST00000588762 FER1L4A9Z1Z3 1794 aa23.5■■□□□ 1.35
GHDC-209ENST00000588762 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
GHDC-209ENST00000588762 KIF3BO15066 747 aa23.49■■□□□ 1.35
GHDC-209ENST00000588762 ERBINQ96RT1 1412 aa23.49■■□□□ 1.35
GHDC-209ENST00000588762 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
GHDC-209ENST00000588762 GGT6Q6P531 493 aa23.46■■□□□ 1.35
GHDC-209ENST00000588762 RIMS1Q86UR5 1692 aaKnown RBP23.45■■□□□ 1.34
GHDC-209ENST00000588762 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
GHDC-209ENST00000588762 RNF17Q9BXT8 1623 aaKnown RBP23.44■■□□□ 1.34
GHDC-209ENST00000588762 ANKRD50Q9ULJ7 1429 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms