RNA–Protein interactions for RNA: ENST00000588640.5

GFAP-213, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-213ENST00000588640 PLCH2O75038 1416 aa29.75■■■□□ 2.35
GFAP-213ENST00000588640 CDC42BPBQ9Y5S2 1711 aa29.75■■■□□ 2.35
GFAP-213ENST00000588640 POGZQ7Z3K3 1410 aa29.73■■■□□ 2.35
GFAP-213ENST00000588640 YEATS2Q9ULM3 1422 aa29.71■■■□□ 2.35
GFAP-213ENST00000588640 MAGI2Q86UL8 1455 aa29.7■■■□□ 2.35
GFAP-213ENST00000588640 PREX2Q70Z35 1606 aa29.7■■■□□ 2.34
GFAP-213ENST00000588640 ARHGAP5Q13017 1502 aa29.7■■■□□ 2.34
GFAP-213ENST00000588640 CLIP1P30622 1438 aa29.7■■■□□ 2.34
GFAP-213ENST00000588640 TROQ12816 1431 aaPredicted RBP29.7■■■□□ 2.34
GFAP-213ENST00000588640 SCAPERQ9BY12 1400 aa29.69■■■□□ 2.34
GFAP-213ENST00000588640 CDK11AQ9UQ88 783 aaPredicted RBP29.67■■■□□ 2.34
GFAP-213ENST00000588640 CDC42BPAQ5VT25 1732 aa29.66■■■□□ 2.34
GFAP-213ENST00000588640 CCDC18Q5T9S5 1454 aa29.65■■■□□ 2.34
GFAP-213ENST00000588640 ITSN2Q9NZM3 1697 aa29.63■■■□□ 2.33
GFAP-213ENST00000588640 KDM5CP41229 1560 aa29.61■■■□□ 2.33
GFAP-213ENST00000588640 ILDR1Q86SU0 546 aaPredicted RBP29.61■■■□□ 2.33
GFAP-213ENST00000588640 CASKIN1Q8WXD9 1431 aa29.6■■■□□ 2.33
GFAP-213ENST00000588640 ZNF518AQ6AHZ1 1483 aa29.59■■■□□ 2.33
GFAP-213ENST00000588640 LMTK3Q96Q04 1460 aa29.58■■■□□ 2.33
GFAP-213ENST00000588640 FYCO1Q9BQS8 1478 aa29.57■■■□□ 2.32
GFAP-213ENST00000588640 EFCAB2Q5VUJ9 269 aa29.56■■■□□ 2.32
GFAP-213ENST00000588640 C9orf84Q5VXU9 1444 aa29.55■■■□□ 2.32
GFAP-213ENST00000588640 ABCA6Q8N139 1617 aa29.54■■■□□ 2.32
GFAP-213ENST00000588640 ABCC1P33527 1531 aa29.54■■■□□ 2.32
GFAP-213ENST00000588640 DIP2CQ9Y2E4 1556 aa29.53■■■□□ 2.32
GFAP-213ENST00000588640 ATP10AO60312 1499 aa29.53■■■□□ 2.32
GFAP-213ENST00000588640 ARHGEF12Q9NZN5 1544 aa29.5■■■□□ 2.31
GFAP-213ENST00000588640 PREX1Q8TCU6 1659 aa29.5■■■□□ 2.31
GFAP-213ENST00000588640 MLECQ14165 292 aa29.47■■■□□ 2.31
GFAP-213ENST00000588640 PLPPR3Q6T4P5 718 aa29.47■■■□□ 2.31
GFAP-213ENST00000588640 REREQ9P2R6 1566 aa29.45■■■□□ 2.31
GFAP-213ENST00000588640 KIDINS220Q9ULH0 1771 aa29.44■■■□□ 2.3
GFAP-213ENST00000588640 SAMD9LQ8IVG5 1584 aa29.41■■■□□ 2.3
GFAP-213ENST00000588640 C3P01024 1663 aa29.38■■■□□ 2.29
GFAP-213ENST00000588640 AFAP1Q8N556 730 aa29.38■■■□□ 2.29
GFAP-213ENST00000588640 MYT1LQ9UL68 1186 aa29.38■■■□□ 2.29
GFAP-213ENST00000588640 MLH3Q9UHC1 1453 aa29.36■■■□□ 2.29
GFAP-213ENST00000588640 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
GFAP-213ENST00000588640 TRAPPC8Q9Y2L5 1435 aa29.35■■■□□ 2.29
GFAP-213ENST00000588640 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
GFAP-213ENST00000588640 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
GFAP-213ENST00000588640 HSPA2P54652 639 aa29.3■■■□□ 2.28
GFAP-213ENST00000588640 AGLP35573 1532 aa29.28■■■□□ 2.28
GFAP-213ENST00000588640 GPATCH8Q9UKJ3 1502 aaKnown RBP29.26■■■□□ 2.27
GFAP-213ENST00000588640 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.27
GFAP-213ENST00000588640 EHBP1L1Q8N3D4 1523 aa29.24■■■□□ 2.27
GFAP-213ENST00000588640 STRCQ7RTU9 1775 aa29.23■■■□□ 2.27
GFAP-213ENST00000588640 TIAM1Q13009 1591 aa29.22■■■□□ 2.27
GFAP-213ENST00000588640 MROH2AA6NES4 1674 aa29.22■■■□□ 2.27
GFAP-213ENST00000588640 ATP7AQ04656 1500 aa29.22■■■□□ 2.27
GFAP-213ENST00000588640 ZNF777Q9ULD5 760 aaPredicted RBP29.21■■■□□ 2.27
GFAP-213ENST00000588640 ADGBQ8N7X0 1667 aa29.19■■■□□ 2.26
GFAP-213ENST00000588640 MTUS2Q5JR59 1369 aa29.19■■■□□ 2.26
GFAP-213ENST00000588640 CEBPAP49715 358 aaPredicted RBP29.18■■■□□ 2.26
GFAP-213ENST00000588640 FBXO41Q8TF61 875 aa29.17■■■□□ 2.26
GFAP-213ENST00000588640 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
GFAP-213ENST00000588640 PLEKHH2Q8IVE3 1493 aa29.17■■■□□ 2.26
GFAP-213ENST00000588640 CLTCQ00610 1675 aaKnown RBP29.16■■■□□ 2.26
GFAP-213ENST00000588640 CCNB3Q8WWL7 1395 aa29.15■■■□□ 2.26
GFAP-213ENST00000588640 UHRF1BP1Q6BDS2 1440 aa29.15■■■□□ 2.26
GFAP-213ENST00000588640 PLXNC1O60486 1568 aa29.14■■■□□ 2.26
GFAP-213ENST00000588640 ESF1Q9H501 851 aaKnown RBP29.1■■■□□ 2.25
GFAP-213ENST00000588640 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
GFAP-213ENST00000588640 SPAG9O60271 1321 aaKnown RBP29.09■■■□□ 2.25
GFAP-213ENST00000588640 CFDP1Q9UEE9 299 aaPredicted RBP29.08■■■□□ 2.25
GFAP-213ENST00000588640 CNTLNQ9NXG0 1405 aa29.08■■■□□ 2.25
GFAP-213ENST00000588640 HNRNPMP52272 730 aaKnown RBP eCLIP29.07■■■□□ 2.24
GFAP-213ENST00000588640 A2MP01023 1474 aa29.03■■■□□ 2.24
GFAP-213ENST00000588640 MYO3AQ8NEV4 1616 aa29.02■■■□□ 2.24
GFAP-213ENST00000588640 ZNF142P52746 1687 aaPredicted RBP29.02■■■□□ 2.24
GFAP-213ENST00000588640 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
GFAP-213ENST00000588640 CAMSAP2Q08AD1 1489 aa28.94■■■□□ 2.22
GFAP-213ENST00000588640 MBD5Q9P267 1494 aa28.94■■■□□ 2.22
GFAP-213ENST00000588640 NPATQ14207 1427 aa28.93■■■□□ 2.22
GFAP-213ENST00000588640 ZNF644Q9H582 1327 aaPredicted RBP28.93■■■□□ 2.22
GFAP-213ENST00000588640 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
GFAP-213ENST00000588640 CERKQ8TCT0 537 aa28.9■■■□□ 2.22
GFAP-213ENST00000588640 CCDC141Q6ZP82 1450 aa28.9■■■□□ 2.22
GFAP-213ENST00000588640 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
GFAP-213ENST00000588640 DMRT2Q9Y5R5 561 aa28.87■■■□□ 2.21
GFAP-213ENST00000588640 ZMYM3Q14202 1370 aa28.87■■■□□ 2.21
GFAP-213ENST00000588640 NCOA1Q15788 1441 aa28.86■■■□□ 2.21
GFAP-213ENST00000588640 VPS8Q8N3P4 1428 aa28.86■■■□□ 2.21
GFAP-213ENST00000588640 ARHGEF5Q12774 1597 aa28.85■■■□□ 2.21
GFAP-213ENST00000588640 RTEL1-TNFRSF6BF6WH68 1400 aa28.85■■■□□ 2.21
GFAP-213ENST00000588640 PTPRTO14522 1441 aa28.84■■■□□ 2.21
GFAP-213ENST00000588640 POLR1AO95602 1720 aaPredicted RBP28.81■■■□□ 2.2
GFAP-213ENST00000588640 GGT6Q6P531 493 aa28.81■■■□□ 2.2
GFAP-213ENST00000588640 LRRC9Q6ZRR7 1453 aa28.8■■■□□ 2.2
GFAP-213ENST00000588640 PTPRKQ15262 1439 aa28.79■■■□□ 2.2
GFAP-213ENST00000588640 KDM5DQ9BY66 1539 aa28.78■■■□□ 2.2
GFAP-213ENST00000588640 FAM135AQ9P2D6 1515 aa28.76■■■□□ 2.19
GFAP-213ENST00000588640 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
GFAP-213ENST00000588640 DHX29Q7Z478 1369 aaKnown RBP28.74■■■□□ 2.19
GFAP-213ENST00000588640 MAST1Q9Y2H9 1570 aa28.73■■■□□ 2.19
GFAP-213ENST00000588640 DNMT1P26358 1616 aaKnown RBP28.72■■■□□ 2.19
GFAP-213ENST00000588640 CROCC2H7BZ55 1655 aa28.72■■■□□ 2.19
GFAP-213ENST00000588640 ZC3H13Q5T200 1668 aaKnown RBP28.72■■■□□ 2.19
GFAP-213ENST00000588640 RNF17Q9BXT8 1623 aaKnown RBP28.72■■■□□ 2.19
GFAP-213ENST00000588640 PLA2R1Q13018 1463 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms