RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 POGZQ7Z3K3 1410 aa16.85■□□□□ 0.29
TPM4-209ENST00000588483 ARHGEF40Q8TER5 1519 aa16.85■□□□□ 0.29
TPM4-209ENST00000588483 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
TPM4-209ENST00000588483 MAGI2Q86UL8 1455 aa16.84■□□□□ 0.29
TPM4-209ENST00000588483 ARHGAP5Q13017 1502 aa16.83■□□□□ 0.28
TPM4-209ENST00000588483 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
TPM4-209ENST00000588483 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
TPM4-209ENST00000588483 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
TPM4-209ENST00000588483 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
TPM4-209ENST00000588483 KDM5CP41229 1560 aa16.8■□□□□ 0.28
TPM4-209ENST00000588483 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
TPM4-209ENST00000588483 ABCC1P33527 1531 aa16.79■□□□□ 0.28
TPM4-209ENST00000588483 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
TPM4-209ENST00000588483 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
TPM4-209ENST00000588483 ZFYVE16Q7Z3T8 1539 aa16.77■□□□□ 0.28
TPM4-209ENST00000588483 TIAM1Q13009 1591 aa16.77■□□□□ 0.27
TPM4-209ENST00000588483 MAP3K1Q13233 1512 aa16.75■□□□□ 0.27
TPM4-209ENST00000588483 ITSN2Q9NZM3 1697 aa16.75■□□□□ 0.27
TPM4-209ENST00000588483 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
TPM4-209ENST00000588483 ADAMTSL3P82987 1691 aa16.74■□□□□ 0.27
TPM4-209ENST00000588483 ARHGEF12Q9NZN5 1544 aa16.74■□□□□ 0.27
TPM4-209ENST00000588483 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
TPM4-209ENST00000588483 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
TPM4-209ENST00000588483 MLH3Q9UHC1 1453 aa16.72■□□□□ 0.27
TPM4-209ENST00000588483 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
TPM4-209ENST00000588483 CCNB3Q8WWL7 1395 aa16.71■□□□□ 0.27
TPM4-209ENST00000588483 KIAA1107Q9UPP5 1409 aa16.7■□□□□ 0.26
TPM4-209ENST00000588483 REREQ9P2R6 1566 aa16.7■□□□□ 0.26
TPM4-209ENST00000588483 PLEKHH2Q8IVE3 1493 aa16.7■□□□□ 0.26
TPM4-209ENST00000588483 SUPT6HQ7KZ85 1726 aaKnown RBP16.7■□□□□ 0.26
TPM4-209ENST00000588483 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
TPM4-209ENST00000588483 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
TPM4-209ENST00000588483 ATP10AO60312 1499 aa16.69■□□□□ 0.26
TPM4-209ENST00000588483 C9orf84Q5VXU9 1444 aa16.69■□□□□ 0.26
TPM4-209ENST00000588483 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
TPM4-209ENST00000588483 AFAP1Q8N556 730 aa16.68■□□□□ 0.26
TPM4-209ENST00000588483 NCOA2Q15596 1464 aa16.67■□□□□ 0.26
TPM4-209ENST00000588483 SYCP2Q9BX26 1530 aa16.67■□□□□ 0.26
TPM4-209ENST00000588483 DIP2CQ9Y2E4 1556 aa16.67■□□□□ 0.26
TPM4-209ENST00000588483 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
TPM4-209ENST00000588483 KIDINS220Q9ULH0 1771 aa16.65■□□□□ 0.26
TPM4-209ENST00000588483 ABCA6Q8N139 1617 aa16.65■□□□□ 0.26
TPM4-209ENST00000588483 MADDQ8WXG6 1647 aa16.64■□□□□ 0.25
TPM4-209ENST00000588483 PTPRMP28827 1452 aa16.62■□□□□ 0.25
TPM4-209ENST00000588483 MBD5Q9P267 1494 aa16.62■□□□□ 0.25
TPM4-209ENST00000588483 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
TPM4-209ENST00000588483 ARID4BQ4LE39 1312 aaPredicted RBP16.62■□□□□ 0.25
TPM4-209ENST00000588483 AGLP35573 1532 aa16.61■□□□□ 0.25
TPM4-209ENST00000588483 ZNF777Q9ULD5 760 aaPredicted RBP16.6■□□□□ 0.25
TPM4-209ENST00000588483 ATP7AQ04656 1500 aa16.59■□□□□ 0.25
TPM4-209ENST00000588483 HNRNPMP52272 730 aaKnown RBP eCLIP16.58■□□□□ 0.24
TPM4-209ENST00000588483 KANK4Q5T7N3 995 aaPredicted RBP16.58■□□□□ 0.24
TPM4-209ENST00000588483 RIMS1Q86UR5 1692 aaKnown RBP16.57■□□□□ 0.24
TPM4-209ENST00000588483 CAMSAP2Q08AD1 1489 aa16.57■□□□□ 0.24
TPM4-209ENST00000588483 FER1L4A9Z1Z3 1794 aa16.56■□□□□ 0.24
TPM4-209ENST00000588483 SPAG9O60271 1321 aaKnown RBP16.56■□□□□ 0.24
TPM4-209ENST00000588483 ZNF644Q9H582 1327 aaPredicted RBP16.56■□□□□ 0.24
TPM4-209ENST00000588483 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
TPM4-209ENST00000588483 ARHGEF5Q12774 1597 aa16.55■□□□□ 0.24
TPM4-209ENST00000588483 RTEL1-TNFRSF6BF6WH68 1400 aa16.55■□□□□ 0.24
TPM4-209ENST00000588483 MIA2Q96PC5 1412 aa16.55■□□□□ 0.24
TPM4-209ENST00000588483 RSPH4AQ5TD94 716 aa16.54■□□□□ 0.24
TPM4-209ENST00000588483 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
TPM4-209ENST00000588483 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
TPM4-209ENST00000588483 ADGBQ8N7X0 1667 aa16.52■□□□□ 0.23
TPM4-209ENST00000588483 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
TPM4-209ENST00000588483 APLP2Q06481 763 aa16.5■□□□□ 0.23
TPM4-209ENST00000588483 A2MP01023 1474 aa16.49■□□□□ 0.23
TPM4-209ENST00000588483 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
TPM4-209ENST00000588483 MLECQ14165 292 aa16.47■□□□□ 0.23
TPM4-209ENST00000588483 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
TPM4-209ENST00000588483 TCOF1Q13428 1488 aaKnown RBP16.44■□□□□ 0.22
TPM4-209ENST00000588483 LMTK3Q96Q04 1460 aa16.44■□□□□ 0.22
TPM4-209ENST00000588483 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
TPM4-209ENST00000588483 MROH2AA6NES4 1674 aa16.43■□□□□ 0.22
TPM4-209ENST00000588483 PTPN23Q9H3S7 1636 aa16.43■□□□□ 0.22
TPM4-209ENST00000588483 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
TPM4-209ENST00000588483 SHANK2Q9UPX8 1470 aa16.42■□□□□ 0.22
TPM4-209ENST00000588483 C3P01024 1663 aa16.41■□□□□ 0.22
TPM4-209ENST00000588483 SETD1BQ9UPS6 1966 aaKnown RBP16.41■□□□□ 0.22
TPM4-209ENST00000588483 FAM135AQ9P2D6 1515 aa16.4■□□□□ 0.22
TPM4-209ENST00000588483 TSPY4P0CV99 314 aa16.4■□□□□ 0.22
TPM4-209ENST00000588483 TSPY10P0CW01 314 aa16.4■□□□□ 0.22
TPM4-209ENST00000588483 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
TPM4-209ENST00000588483 CROCC2H7BZ55 1655 aa16.4■□□□□ 0.22
TPM4-209ENST00000588483 PREX1Q8TCU6 1659 aa16.39■□□□□ 0.21
TPM4-209ENST00000588483 DNMT1P26358 1616 aaKnown RBP16.37■□□□□ 0.21
TPM4-209ENST00000588483 ABCC5O15440 1437 aa16.36■□□□□ 0.21
TPM4-209ENST00000588483 EIF2AK4Q9P2K8 1649 aaKnown RBP16.36■□□□□ 0.21
TPM4-209ENST00000588483 ESF1Q9H501 851 aaKnown RBP16.35■□□□□ 0.21
TPM4-209ENST00000588483 DAPK1P53355 1430 aa16.35■□□□□ 0.21
TPM4-209ENST00000588483 NPATQ14207 1427 aa16.35■□□□□ 0.21
TPM4-209ENST00000588483 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
TPM4-209ENST00000588483 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
TPM4-209ENST00000588483 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
TPM4-209ENST00000588483 ZMYM3Q14202 1370 aa16.33■□□□□ 0.2
TPM4-209ENST00000588483 DUOX2Q9NRD8 1548 aa16.32■□□□□ 0.2
TPM4-209ENST00000588483 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
TPM4-209ENST00000588483 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
TPM4-209ENST00000588483 GGT6Q6P531 493 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms