RNA–Protein interactions for RNA: ENST00000588040.1

AC093227.1-201, humanhuman

TSL 3 BASIC

Gene AC093227.1, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093227.1-201ENST00000588040 NKX1-1Q15270 411 aaPredicted RBP15.45■□□□□ 0.06
AC093227.1-201ENST00000588040 MFRPQ9BY79 579 aa15.45■□□□□ 0.06
AC093227.1-201ENST00000588040 PHF8Q9UPP1 1060 aa15.45■□□□□ 0.06
AC093227.1-201ENST00000588040 PDCD7Q8N8D1 485 aaKnown RBP15.41■□□□□ 0.06
AC093227.1-201ENST00000588040 FBXO22Q8NEZ5 403 aa15.41■□□□□ 0.06
AC093227.1-201ENST00000588040 RYDENQ9NUL5 291 aaKnown RBP15.4■□□□□ 0.06
AC093227.1-201ENST00000588040 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.39■□□□□ 0.05
AC093227.1-201ENST00000588040 C3orf67Q6ZVT6 689 aa15.38■□□□□ 0.05
AC093227.1-201ENST00000588040 MS4A4AQ96JQ5 239 aa15.36■□□□□ 0.05
AC093227.1-201ENST00000588040 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
AC093227.1-201ENST00000588040 DPY19L2Q6NUT2 758 aa15.33■□□□□ 0.04
AC093227.1-201ENST00000588040 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
AC093227.1-201ENST00000588040 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
AC093227.1-201ENST00000588040 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
AC093227.1-201ENST00000588040 G3V3G9 751 aa15.24■□□□□ 0.03
AC093227.1-201ENST00000588040 PAXIP1Q6ZW49 1069 aaPredicted RBP15.24■□□□□ 0.03
AC093227.1-201ENST00000588040 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
AC093227.1-201ENST00000588040 PPP1R37O75864 691 aa15.22■□□□□ 0.03
AC093227.1-201ENST00000588040 CFAP44Q96MT7 982 aa15.21■□□□□ 0.02
AC093227.1-201ENST00000588040 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
AC093227.1-201ENST00000588040 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
AC093227.1-201ENST00000588040 HOXB3P14651 431 aaPredicted RBP15.18■□□□□ 0.02
AC093227.1-201ENST00000588040 MICALL2Q8IY33 904 aa15.17■□□□□ 0.02
AC093227.1-201ENST00000588040 ERBB3P21860 1342 aa15.17■□□□□ 0.02
AC093227.1-201ENST00000588040 PTGER2P43116 358 aa15.07■□□□□ 0
AC093227.1-201ENST00000588040 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
AC093227.1-201ENST00000588040 VARS2Q5ST30 1063 aaKnown RBP15.03■□□□□ -0
AC093227.1-201ENST00000588040 ZNF687Q8N1G0 1237 aa14.98□□□□□ -0.01
AC093227.1-201ENST00000588040 DOK7Q18PE1 504 aa14.97□□□□□ -0.01
AC093227.1-201ENST00000588040 TMEM92Q6UXU6 159 aa14.96□□□□□ -0.02
AC093227.1-201ENST00000588040 TSHZ2Q9NRE2 1034 aa14.94□□□□□ -0.02
AC093227.1-201ENST00000588040 TMC2Q8TDI7 906 aa14.93□□□□□ -0.02
AC093227.1-201ENST00000588040 CADPS2Q86UW7 1296 aa14.92□□□□□ -0.02
AC093227.1-201ENST00000588040 PLA2G2EQ9NZK7 142 aa14.91□□□□□ -0.02
AC093227.1-201ENST00000588040 KIF3CO14782 793 aa14.9□□□□□ -0.02
AC093227.1-201ENST00000588040 PDE4AP27815 886 aa14.9□□□□□ -0.02
AC093227.1-201ENST00000588040 C2orf72A6NCS6 295 aa14.89□□□□□ -0.03
AC093227.1-201ENST00000588040 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
AC093227.1-201ENST00000588040 CRISPLD2Q9H0B8 497 aa14.89□□□□□ -0.03
AC093227.1-201ENST00000588040 GPHNQ9NQX3 736 aaPredicted RBP14.89□□□□□ -0.03
AC093227.1-201ENST00000588040 NCKAP5LQ9HCH0 1330 aa14.87□□□□□ -0.03
AC093227.1-201ENST00000588040 RIMBP2O15034 1052 aa14.85□□□□□ -0.03
AC093227.1-201ENST00000588040 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
AC093227.1-201ENST00000588040 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
AC093227.1-201ENST00000588040 FOXK1P85037 733 aa14.81□□□□□ -0.04
AC093227.1-201ENST00000588040 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
AC093227.1-201ENST00000588040 DSG2Q14126 1118 aa14.78□□□□□ -0.04
AC093227.1-201ENST00000588040 MFSD10Q14728 455 aa14.78□□□□□ -0.04
AC093227.1-201ENST00000588040 DDX27Q96GQ7 796 aaKnown RBP14.78□□□□□ -0.04
AC093227.1-201ENST00000588040 ZSWIM6Q9HCJ5 1215 aa14.76□□□□□ -0.05
AC093227.1-201ENST00000588040 PPP1R15BQ5SWA1 713 aa14.75□□□□□ -0.05
AC093227.1-201ENST00000588040 PLPP6Q8IY26 295 aa14.75□□□□□ -0.05
AC093227.1-201ENST00000588040 VSIG10Q8N0Z9 540 aa14.74□□□□□ -0.05
AC093227.1-201ENST00000588040 WDR70Q9NW82 654 aa14.73□□□□□ -0.05
AC093227.1-201ENST00000588040 KDM2AQ9Y2K7 1162 aa14.72□□□□□ -0.05
AC093227.1-201ENST00000588040 GPR153Q6NV75 609 aa14.7□□□□□ -0.06
AC093227.1-201ENST00000588040 LSM11P83369 360 aaKnown RBP eCLIP14.68□□□□□ -0.06
AC093227.1-201ENST00000588040 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
AC093227.1-201ENST00000588040 SLC34A2O95436 690 aa14.66□□□□□ -0.06
AC093227.1-201ENST00000588040 CAMK2BQ13554 666 aa14.6□□□□□ -0.07
AC093227.1-201ENST00000588040 E2F4Q16254 413 aa14.6□□□□□ -0.07
AC093227.1-201ENST00000588040 PTCD2Q8WV60 388 aaKnown RBP14.6□□□□□ -0.07
AC093227.1-201ENST00000588040 TBC1D12O60347 775 aa14.56□□□□□ -0.08
AC093227.1-201ENST00000588040 OXER1Q8TDS5 423 aa14.56□□□□□ -0.08
AC093227.1-201ENST00000588040 EMILIN3Q9NT22 766 aa14.55□□□□□ -0.08
AC093227.1-201ENST00000588040 PCDHGA4Q9Y5G9 962 aa14.55□□□□□ -0.08
AC093227.1-201ENST00000588040 UPF1Q92900 1129 aaKnown RBP eCLIP14.53□□□□□ -0.08
AC093227.1-201ENST00000588040 ARSIQ5FYB1 569 aa14.52□□□□□ -0.08
AC093227.1-201ENST00000588040 ZNF316A6NFI3 1004 aaPredicted RBP14.51□□□□□ -0.09
AC093227.1-201ENST00000588040 MAP3K9P80192 1104 aa14.48□□□□□ -0.09
AC093227.1-201ENST00000588040 ARIH1Q9Y4X5 557 aaPredicted RBP14.48□□□□□ -0.09
AC093227.1-201ENST00000588040 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
AC093227.1-201ENST00000588040 IRX2Q9BZI1 471 aaPredicted RBP14.47□□□□□ -0.09
AC093227.1-201ENST00000588040 KHSRPQ92945 711 aaKnown RBP eCLIP14.46□□□□□ -0.1
AC093227.1-201ENST00000588040 KCNV2Q8TDN2 545 aa14.45□□□□□ -0.1
AC093227.1-201ENST00000588040 DPYSL4O14531 572 aa14.44□□□□□ -0.1
AC093227.1-201ENST00000588040 PBX2P40425 430 aa14.44□□□□□ -0.1
AC093227.1-201ENST00000588040 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
AC093227.1-201ENST00000588040 NUDT7P0C024 238 aa14.43□□□□□ -0.1
AC093227.1-201ENST00000588040 KDM4FA0A1W2PPD8 638 aa14.42□□□□□ -0.1
AC093227.1-201ENST00000588040 RGS20O76081 388 aa14.42□□□□□ -0.1
AC093227.1-201ENST00000588040 EVI5O60447 810 aa14.4□□□□□ -0.1
AC093227.1-201ENST00000588040 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
AC093227.1-201ENST00000588040 SPDYE16A6NNV3 312 aaPredicted RBP14.37□□□□□ -0.11
AC093227.1-201ENST00000588040 POTEEQ6S8J3 1075 aa14.37□□□□□ -0.11
AC093227.1-201ENST00000588040 PDIA6Q15084 440 aa14.34□□□□□ -0.11
AC093227.1-201ENST00000588040 LHX6Q9UPM6 363 aa14.34□□□□□ -0.11
AC093227.1-201ENST00000588040 AXIN2Q9Y2T1 843 aa14.32□□□□□ -0.12
AC093227.1-201ENST00000588040 PSDA5PKW4 1024 aaPredicted RBP14.3□□□□□ -0.12
AC093227.1-201ENST00000588040 ADGRD1Q6QNK2 874 aa14.27□□□□□ -0.12
AC093227.1-201ENST00000588040 FOSBP53539 338 aa14.23□□□□□ -0.13
AC093227.1-201ENST00000588040 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
AC093227.1-201ENST00000588040 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
AC093227.1-201ENST00000588040 ZNF454Q8N9F8 522 aa14.22□□□□□ -0.13
AC093227.1-201ENST00000588040 PHF14O94880 888 aa14.2□□□□□ -0.14
AC093227.1-201ENST00000588040 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
AC093227.1-201ENST00000588040 DDX12PQ92771 950 aa14.2□□□□□ -0.14
AC093227.1-201ENST00000588040 PCDHGA10Q9Y5H3 936 aa14.19□□□□□ -0.14
AC093227.1-201ENST00000588040 EPAS1Q99814 870 aa14.18□□□□□ -0.14
AC093227.1-201ENST00000588040 SEMA3EO15041 775 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms