RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 POGZQ7Z3K3 1410 aa27.92■■■□□ 2.06
SF3A2-203ENST00000587637 PCF11O94913 1555 aaKnown RBP27.92■■■□□ 2.06
SF3A2-203ENST00000587637 PLCH2O75038 1416 aa27.91■■■□□ 2.06
SF3A2-203ENST00000587637 SCAPERQ9BY12 1400 aa27.89■■■□□ 2.06
SF3A2-203ENST00000587637 LMTK3Q96Q04 1460 aa27.88■■■□□ 2.05
SF3A2-203ENST00000587637 FER1L4A9Z1Z3 1794 aa27.86■■■□□ 2.05
SF3A2-203ENST00000587637 PLPPR3Q6T4P5 718 aa27.85■■■□□ 2.05
SF3A2-203ENST00000587637 TROQ12816 1431 aaPredicted RBP27.84■■■□□ 2.05
SF3A2-203ENST00000587637 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
SF3A2-203ENST00000587637 CDC42BPBQ9Y5S2 1711 aa27.81■■■□□ 2.04
SF3A2-203ENST00000587637 MAGI2Q86UL8 1455 aa27.79■■■□□ 2.04
SF3A2-203ENST00000587637 MLECQ14165 292 aa27.79■■■□□ 2.04
SF3A2-203ENST00000587637 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
SF3A2-203ENST00000587637 KDM5CP41229 1560 aa27.75■■■□□ 2.03
SF3A2-203ENST00000587637 CLIP1P30622 1438 aa27.74■■■□□ 2.03
SF3A2-203ENST00000587637 C9orf84Q5VXU9 1444 aa27.74■■■□□ 2.03
SF3A2-203ENST00000587637 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
SF3A2-203ENST00000587637 ABCA6Q8N139 1617 aa27.72■■■□□ 2.03
SF3A2-203ENST00000587637 DIP2CQ9Y2E4 1556 aa27.72■■■□□ 2.03
SF3A2-203ENST00000587637 EFCAB2Q5VUJ9 269 aa27.71■■■□□ 2.03
SF3A2-203ENST00000587637 CASKIN1Q8WXD9 1431 aa27.71■■■□□ 2.03
SF3A2-203ENST00000587637 ATP10AO60312 1499 aa27.7■■■□□ 2.03
SF3A2-203ENST00000587637 HSPA2P54652 639 aa27.7■■■□□ 2.02
SF3A2-203ENST00000587637 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
SF3A2-203ENST00000587637 ZNF518AQ6AHZ1 1483 aa27.7■■■□□ 2.02
SF3A2-203ENST00000587637 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.02
SF3A2-203ENST00000587637 ABCC1P33527 1531 aa27.69■■■□□ 2.02
SF3A2-203ENST00000587637 CDK11AQ9UQ88 783 aaPredicted RBP27.69■■■□□ 2.02
SF3A2-203ENST00000587637 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
SF3A2-203ENST00000587637 AFAP1Q8N556 730 aa27.65■■■□□ 2.02
SF3A2-203ENST00000587637 TRAPPC8Q9Y2L5 1435 aa27.63■■■□□ 2.01
SF3A2-203ENST00000587637 FYCO1Q9BQS8 1478 aa27.63■■■□□ 2.01
SF3A2-203ENST00000587637 PREX1Q8TCU6 1659 aa27.59■■■□□ 2.01
SF3A2-203ENST00000587637 SAMD9LQ8IVG5 1584 aa27.57■■■□□ 2
SF3A2-203ENST00000587637 KIDINS220Q9ULH0 1771 aa27.57■■■□□ 2
SF3A2-203ENST00000587637 CEBPAP49715 358 aaPredicted RBP27.56■■■□□ 2
SF3A2-203ENST00000587637 REREQ9P2R6 1566 aa27.56■■■□□ 2
SF3A2-203ENST00000587637 MYT1LQ9UL68 1186 aa27.54■■■□□ 2
SF3A2-203ENST00000587637 SYCP2Q9BX26 1530 aa27.53■■■□□ 2
SF3A2-203ENST00000587637 MLH3Q9UHC1 1453 aa27.53■■■□□ 2
SF3A2-203ENST00000587637 C3P01024 1663 aa27.52■■■□□ 2
SF3A2-203ENST00000587637 FBXO41Q8TF61 875 aa27.51■■□□□ 1.99
SF3A2-203ENST00000587637 GPATCH8Q9UKJ3 1502 aaKnown RBP27.46■■□□□ 1.99
SF3A2-203ENST00000587637 AGLP35573 1532 aa27.45■■□□□ 1.98
SF3A2-203ENST00000587637 STRCQ7RTU9 1775 aa27.44■■□□□ 1.98
SF3A2-203ENST00000587637 ZNF777Q9ULD5 760 aaPredicted RBP27.43■■□□□ 1.98
SF3A2-203ENST00000587637 SUPT6HQ7KZ85 1726 aaKnown RBP27.41■■□□□ 1.98
SF3A2-203ENST00000587637 INO80Q9ULG1 1556 aaPredicted RBP27.39■■□□□ 1.97
SF3A2-203ENST00000587637 TIAM1Q13009 1591 aa27.38■■□□□ 1.97
SF3A2-203ENST00000587637 UHRF1BP1Q6BDS2 1440 aa27.37■■□□□ 1.97
SF3A2-203ENST00000587637 ATP7AQ04656 1500 aa27.36■■□□□ 1.97
SF3A2-203ENST00000587637 HNRNPMP52272 730 aaKnown RBP eCLIP27.34■■□□□ 1.97
SF3A2-203ENST00000587637 PLXNC1O60486 1568 aa27.32■■□□□ 1.96
SF3A2-203ENST00000587637 SETD1BQ9UPS6 1966 aaKnown RBP27.32■■□□□ 1.96
SF3A2-203ENST00000587637 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
SF3A2-203ENST00000587637 MTUS2Q5JR59 1369 aa27.31■■□□□ 1.96
SF3A2-203ENST00000587637 CCNB3Q8WWL7 1395 aa27.3■■□□□ 1.96
SF3A2-203ENST00000587637 CLTCQ00610 1675 aaKnown RBP27.3■■□□□ 1.96
SF3A2-203ENST00000587637 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
SF3A2-203ENST00000587637 MROH2AA6NES4 1674 aa27.28■■□□□ 1.96
SF3A2-203ENST00000587637 SPAG9O60271 1321 aaKnown RBP27.28■■□□□ 1.96
SF3A2-203ENST00000587637 ZNF644Q9H582 1327 aaPredicted RBP27.25■■□□□ 1.95
SF3A2-203ENST00000587637 CERKQ8TCT0 537 aa27.25■■□□□ 1.95
SF3A2-203ENST00000587637 CFDP1Q9UEE9 299 aaPredicted RBP27.25■■□□□ 1.95
SF3A2-203ENST00000587637 KIAA1107Q9UPP5 1409 aa27.24■■□□□ 1.95
SF3A2-203ENST00000587637 PLEKHH2Q8IVE3 1493 aa27.24■■□□□ 1.95
SF3A2-203ENST00000587637 A2MP01023 1474 aa27.23■■□□□ 1.95
SF3A2-203ENST00000587637 CNTLNQ9NXG0 1405 aa27.23■■□□□ 1.95
SF3A2-203ENST00000587637 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
SF3A2-203ENST00000587637 ADGBQ8N7X0 1667 aa27.21■■□□□ 1.95
SF3A2-203ENST00000587637 MYO3AQ8NEV4 1616 aa27.2■■□□□ 1.95
SF3A2-203ENST00000587637 MBD5Q9P267 1494 aa27.18■■□□□ 1.94
SF3A2-203ENST00000587637 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
SF3A2-203ENST00000587637 CAMSAP1Q5T5Y3 1602 aa27.16■■□□□ 1.94
SF3A2-203ENST00000587637 ZNF142P52746 1687 aaPredicted RBP27.14■■□□□ 1.93
SF3A2-203ENST00000587637 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
SF3A2-203ENST00000587637 ZMYM3Q14202 1370 aa27.13■■□□□ 1.93
SF3A2-203ENST00000587637 NPATQ14207 1427 aa27.12■■□□□ 1.93
SF3A2-203ENST00000587637 CAMSAP2Q08AD1 1489 aa27.12■■□□□ 1.93
SF3A2-203ENST00000587637 PTPRTO14522 1441 aa27.1■■□□□ 1.93
SF3A2-203ENST00000587637 LTBP4Q8N2S1 1624 aa27.09■■□□□ 1.93
SF3A2-203ENST00000587637 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
SF3A2-203ENST00000587637 GGT6Q6P531 493 aa27.08■■□□□ 1.93
SF3A2-203ENST00000587637 CEP170BQ9Y4F5 1589 aaPredicted RBP27.08■■□□□ 1.93
SF3A2-203ENST00000587637 CCDC141Q6ZP82 1450 aa27.06■■□□□ 1.92
SF3A2-203ENST00000587637 DMRT2Q9Y5R5 561 aa27.03■■□□□ 1.92
SF3A2-203ENST00000587637 NCKAP5LQ9HCH0 1330 aa27■■□□□ 1.91
SF3A2-203ENST00000587637 RTEL1-TNFRSF6BF6WH68 1400 aa26.99■■□□□ 1.91
SF3A2-203ENST00000587637 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
SF3A2-203ENST00000587637 VPS8Q8N3P4 1428 aa26.97■■□□□ 1.91
SF3A2-203ENST00000587637 ARHGEF5Q12774 1597 aa26.96■■□□□ 1.91
SF3A2-203ENST00000587637 DHX29Q7Z478 1369 aaKnown RBP26.96■■□□□ 1.91
SF3A2-203ENST00000587637 LRRC9Q6ZRR7 1453 aa26.94■■□□□ 1.9
SF3A2-203ENST00000587637 KDM5DQ9BY66 1539 aa26.94■■□□□ 1.9
SF3A2-203ENST00000587637 DNMT1P26358 1616 aaKnown RBP26.94■■□□□ 1.9
SF3A2-203ENST00000587637 PLA2R1Q13018 1463 aa26.93■■□□□ 1.9
SF3A2-203ENST00000587637 TCOF1Q13428 1488 aaKnown RBP26.93■■□□□ 1.9
SF3A2-203ENST00000587637 ZNF335Q9H4Z2 1342 aaPredicted RBP26.91■■□□□ 1.9
SF3A2-203ENST00000587637 A2ML1A8K2U0 1454 aa26.9■■□□□ 1.9
SF3A2-203ENST00000587637 KIF3BO15066 747 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms