RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 ZMYM4Q5VZL5 1548 aa18.62■□□□□ 0.57
PRKCSH-206ENST00000587509 ARHGEF40Q8TER5 1519 aa18.62■□□□□ 0.57
PRKCSH-206ENST00000587509 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
PRKCSH-206ENST00000587509 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
PRKCSH-206ENST00000587509 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
PRKCSH-206ENST00000587509 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
PRKCSH-206ENST00000587509 ZNF518AQ6AHZ1 1483 aa18.59■□□□□ 0.57
PRKCSH-206ENST00000587509 SCAPERQ9BY12 1400 aa18.59■□□□□ 0.57
PRKCSH-206ENST00000587509 ZFYVE16Q7Z3T8 1539 aa18.57■□□□□ 0.56
PRKCSH-206ENST00000587509 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
PRKCSH-206ENST00000587509 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
PRKCSH-206ENST00000587509 CDC42BPBQ9Y5S2 1711 aa18.55■□□□□ 0.56
PRKCSH-206ENST00000587509 CDC42BPAQ5VT25 1732 aa18.54■□□□□ 0.56
PRKCSH-206ENST00000587509 ABCC1P33527 1531 aa18.54■□□□□ 0.56
PRKCSH-206ENST00000587509 ITSN2Q9NZM3 1697 aa18.54■□□□□ 0.56
PRKCSH-206ENST00000587509 PLEKHH2Q8IVE3 1493 aa18.53■□□□□ 0.56
PRKCSH-206ENST00000587509 SUPT6HQ7KZ85 1726 aaKnown RBP18.52■□□□□ 0.55
PRKCSH-206ENST00000587509 MAP3K1Q13233 1512 aa18.51■□□□□ 0.55
PRKCSH-206ENST00000587509 KDM4FA0A1W2PPD8 638 aa18.51■□□□□ 0.55
PRKCSH-206ENST00000587509 KDM5CP41229 1560 aa18.51■□□□□ 0.55
PRKCSH-206ENST00000587509 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-206ENST00000587509 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
PRKCSH-206ENST00000587509 CFDP1Q9UEE9 299 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-206ENST00000587509 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-206ENST00000587509 APLP2Q06481 763 aa18.48■□□□□ 0.55
PRKCSH-206ENST00000587509 MYT1LQ9UL68 1186 aa18.47■□□□□ 0.55
PRKCSH-206ENST00000587509 C9orf84Q5VXU9 1444 aa18.46■□□□□ 0.55
PRKCSH-206ENST00000587509 LRRC9Q6ZRR7 1453 aa18.46■□□□□ 0.54
PRKCSH-206ENST00000587509 SYCP2Q9BX26 1530 aa18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 ZNF777Q9ULD5 760 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 YEATS2Q9ULM3 1422 aa18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 KIAA1107Q9UPP5 1409 aa18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
PRKCSH-206ENST00000587509 ATP10AO60312 1499 aa18.44■□□□□ 0.54
PRKCSH-206ENST00000587509 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
PRKCSH-206ENST00000587509 BCORL1Q5H9F3 1711 aa18.43■□□□□ 0.54
PRKCSH-206ENST00000587509 TRAPPC8Q9Y2L5 1435 aa18.4■□□□□ 0.54
PRKCSH-206ENST00000587509 REREQ9P2R6 1566 aa18.4■□□□□ 0.54
PRKCSH-206ENST00000587509 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
PRKCSH-206ENST00000587509 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
PRKCSH-206ENST00000587509 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
PRKCSH-206ENST00000587509 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
PRKCSH-206ENST00000587509 SPAG9O60271 1321 aaKnown RBP18.36■□□□□ 0.53
PRKCSH-206ENST00000587509 ABCA6Q8N139 1617 aa18.36■□□□□ 0.53
PRKCSH-206ENST00000587509 MADDQ8WXG6 1647 aa18.35■□□□□ 0.53
PRKCSH-206ENST00000587509 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
PRKCSH-206ENST00000587509 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
PRKCSH-206ENST00000587509 INO80Q9ULG1 1556 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-206ENST00000587509 PTPRMP28827 1452 aa18.33■□□□□ 0.52
PRKCSH-206ENST00000587509 CCDC141Q6ZP82 1450 aa18.33■□□□□ 0.52
PRKCSH-206ENST00000587509 KIDINS220Q9ULH0 1771 aa18.32■□□□□ 0.52
PRKCSH-206ENST00000587509 RSPH4AQ5TD94 716 aa18.32■□□□□ 0.52
PRKCSH-206ENST00000587509 AGLP35573 1532 aa18.32■□□□□ 0.52
PRKCSH-206ENST00000587509 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
PRKCSH-206ENST00000587509 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
PRKCSH-206ENST00000587509 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
PRKCSH-206ENST00000587509 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
PRKCSH-206ENST00000587509 RIMS1Q86UR5 1692 aaKnown RBP18.3■□□□□ 0.52
PRKCSH-206ENST00000587509 ARHGEF5Q12774 1597 aa18.29■□□□□ 0.52
PRKCSH-206ENST00000587509 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
PRKCSH-206ENST00000587509 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
PRKCSH-206ENST00000587509 SIGLEC1Q9BZZ2 1709 aa18.28■□□□□ 0.52
PRKCSH-206ENST00000587509 MLECQ14165 292 aa18.27■□□□□ 0.52
PRKCSH-206ENST00000587509 KANK4Q5T7N3 995 aaPredicted RBP18.27■□□□□ 0.52
PRKCSH-206ENST00000587509 ADGBQ8N7X0 1667 aa18.26■□□□□ 0.51
PRKCSH-206ENST00000587509 ESF1Q9H501 851 aaKnown RBP18.26■□□□□ 0.51
PRKCSH-206ENST00000587509 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-206ENST00000587509 A2MP01023 1474 aa18.25■□□□□ 0.51
PRKCSH-206ENST00000587509 PLXNC1O60486 1568 aa18.24■□□□□ 0.51
PRKCSH-206ENST00000587509 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
PRKCSH-206ENST00000587509 TSPY4P0CV99 314 aa18.22■□□□□ 0.51
PRKCSH-206ENST00000587509 TSPY10P0CW01 314 aa18.22■□□□□ 0.51
PRKCSH-206ENST00000587509 MAST1Q9Y2H9 1570 aa18.18■□□□□ 0.5
PRKCSH-206ENST00000587509 FGD6Q6ZV73 1430 aa18.18■□□□□ 0.5
PRKCSH-206ENST00000587509 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
PRKCSH-206ENST00000587509 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
PRKCSH-206ENST00000587509 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
PRKCSH-206ENST00000587509 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-206ENST00000587509 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.5
PRKCSH-206ENST00000587509 MROH2AA6NES4 1674 aa18.14■□□□□ 0.49
PRKCSH-206ENST00000587509 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
PRKCSH-206ENST00000587509 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
PRKCSH-206ENST00000587509 PLPPR3Q6T4P5 718 aa18.12■□□□□ 0.49
PRKCSH-206ENST00000587509 PREX1Q8TCU6 1659 aa18.1■□□□□ 0.49
PRKCSH-206ENST00000587509 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-206ENST00000587509 LMTK3Q96Q04 1460 aa18.1■□□□□ 0.49
PRKCSH-206ENST00000587509 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-206ENST00000587509 DAPK1P53355 1430 aa18.08■□□□□ 0.49
PRKCSH-206ENST00000587509 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
PRKCSH-206ENST00000587509 GGT6Q6P531 493 aa18.08■□□□□ 0.48
PRKCSH-206ENST00000587509 C3P01024 1663 aa18.08■□□□□ 0.48
PRKCSH-206ENST00000587509 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
PRKCSH-206ENST00000587509 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
PRKCSH-206ENST00000587509 NPATQ14207 1427 aa18.06■□□□□ 0.48
PRKCSH-206ENST00000587509 ABCC5O15440 1437 aa18.06■□□□□ 0.48
PRKCSH-206ENST00000587509 CLTCQ00610 1675 aaKnown RBP18.06■□□□□ 0.48
PRKCSH-206ENST00000587509 KIF3BO15066 747 aa18.05■□□□□ 0.48
PRKCSH-206ENST00000587509 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
PRKCSH-206ENST00000587509 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms