RNA–Protein interactions for RNA: ENST00000587479.2

RANBP3-211, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-211ENST00000587479 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
RANBP3-211ENST00000587479 MAGI2Q86UL8 1455 aa25.37■■□□□ 1.65
RANBP3-211ENST00000587479 ZFYVE16Q7Z3T8 1539 aa25.37■■□□□ 1.65
RANBP3-211ENST00000587479 ARID4BQ4LE39 1312 aaPredicted RBP25.37■■□□□ 1.65
RANBP3-211ENST00000587479 CDC42BPBQ9Y5S2 1711 aa25.36■■□□□ 1.65
RANBP3-211ENST00000587479 CEP162Q5TB80 1403 aa25.35■■□□□ 1.65
RANBP3-211ENST00000587479 PREX2Q70Z35 1606 aa25.34■■□□□ 1.65
RANBP3-211ENST00000587479 ADAMTSL3P82987 1691 aa25.34■■□□□ 1.65
RANBP3-211ENST00000587479 BCORL1Q5H9F3 1711 aa25.34■■□□□ 1.65
RANBP3-211ENST00000587479 CDC42BPAQ5VT25 1732 aa25.3■■□□□ 1.64
RANBP3-211ENST00000587479 YEATS2Q9ULM3 1422 aa25.29■■□□□ 1.64
RANBP3-211ENST00000587479 ZNF518AQ6AHZ1 1483 aa25.29■■□□□ 1.64
RANBP3-211ENST00000587479 MADDQ8WXG6 1647 aa25.24■■□□□ 1.63
RANBP3-211ENST00000587479 KDM5CP41229 1560 aa25.23■■□□□ 1.63
RANBP3-211ENST00000587479 PTPRMP28827 1452 aa25.23■■□□□ 1.63
RANBP3-211ENST00000587479 MTUS2Q5JR59 1369 aa25.23■■□□□ 1.63
RANBP3-211ENST00000587479 ABCC1P33527 1531 aa25.22■■□□□ 1.63
RANBP3-211ENST00000587479 ITSN2Q9NZM3 1697 aa25.22■■□□□ 1.63
RANBP3-211ENST00000587479 ATP10AO60312 1499 aa25.21■■□□□ 1.63
RANBP3-211ENST00000587479 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
RANBP3-211ENST00000587479 HECW2Q9P2P5 1572 aa25.21■■□□□ 1.63
RANBP3-211ENST00000587479 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
RANBP3-211ENST00000587479 MYT1LQ9UL68 1186 aa25.2■■□□□ 1.62
RANBP3-211ENST00000587479 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
RANBP3-211ENST00000587479 RIMS1Q86UR5 1692 aaKnown RBP25.19■■□□□ 1.62
RANBP3-211ENST00000587479 C9orf84Q5VXU9 1444 aa25.19■■□□□ 1.62
RANBP3-211ENST00000587479 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
RANBP3-211ENST00000587479 CCNB3Q8WWL7 1395 aa25.17■■□□□ 1.62
RANBP3-211ENST00000587479 EHBP1L1Q8N3D4 1523 aa25.17■■□□□ 1.62
RANBP3-211ENST00000587479 ARHGEF12Q9NZN5 1544 aa25.16■■□□□ 1.62
RANBP3-211ENST00000587479 ZNF777Q9ULD5 760 aaPredicted RBP25.15■■□□□ 1.62
RANBP3-211ENST00000587479 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
RANBP3-211ENST00000587479 TRAPPC8Q9Y2L5 1435 aa25.14■■□□□ 1.62
RANBP3-211ENST00000587479 SAMD9LQ8IVG5 1584 aa25.14■■□□□ 1.61
RANBP3-211ENST00000587479 CFDP1Q9UEE9 299 aaPredicted RBP25.12■■□□□ 1.61
RANBP3-211ENST00000587479 DIP2CQ9Y2E4 1556 aa25.12■■□□□ 1.61
RANBP3-211ENST00000587479 FER1L4A9Z1Z3 1794 aa25.12■■□□□ 1.61
RANBP3-211ENST00000587479 MLECQ14165 292 aa25.11■■□□□ 1.61
RANBP3-211ENST00000587479 PLEKHH2Q8IVE3 1493 aa25.1■■□□□ 1.61
RANBP3-211ENST00000587479 ABCA6Q8N139 1617 aa25.1■■□□□ 1.61
RANBP3-211ENST00000587479 SYCP2Q9BX26 1530 aa25.09■■□□□ 1.61
RANBP3-211ENST00000587479 VPS8Q8N3P4 1428 aa25.09■■□□□ 1.61
RANBP3-211ENST00000587479 REREQ9P2R6 1566 aa25.09■■□□□ 1.61
RANBP3-211ENST00000587479 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
RANBP3-211ENST00000587479 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
RANBP3-211ENST00000587479 SUPT6HQ7KZ85 1726 aaKnown RBP25.06■■□□□ 1.6
RANBP3-211ENST00000587479 KIAA1107Q9UPP5 1409 aa25.05■■□□□ 1.6
RANBP3-211ENST00000587479 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.67e-7■■■□□ 15.5
RANBP3-211ENST00000587479 SPAG9O60271 1321 aaKnown RBP25.01■■□□□ 1.59
RANBP3-211ENST00000587479 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
RANBP3-211ENST00000587479 AGLP35573 1532 aa25■■□□□ 1.59
RANBP3-211ENST00000587479 NCOA2Q15596 1464 aa24.98■■□□□ 1.59
RANBP3-211ENST00000587479 ATP7AQ04656 1500 aa24.96■■□□□ 1.59
RANBP3-211ENST00000587479 INO80Q9ULG1 1556 aaPredicted RBP24.95■■□□□ 1.58
RANBP3-211ENST00000587479 MAP3K1Q13233 1512 aa24.94■■□□□ 1.58
RANBP3-211ENST00000587479 LRRC9Q6ZRR7 1453 aa24.94■■□□□ 1.58
RANBP3-211ENST00000587479 ZNF644Q9H582 1327 aaPredicted RBP24.93■■□□□ 1.58
RANBP3-211ENST00000587479 LMTK3Q96Q04 1460 aa24.93■■□□□ 1.58
RANBP3-211ENST00000587479 ESF1Q9H501 851 aaKnown RBP24.92■■□□□ 1.58
RANBP3-211ENST00000587479 MBD5Q9P267 1494 aa24.89■■□□□ 1.58
RANBP3-211ENST00000587479 ADGBQ8N7X0 1667 aa24.88■■□□□ 1.57
RANBP3-211ENST00000587479 CAMSAP2Q08AD1 1489 aa24.87■■□□□ 1.57
RANBP3-211ENST00000587479 PREX1Q8TCU6 1659 aa24.86■■□□□ 1.57
RANBP3-211ENST00000587479 A2MP01023 1474 aa24.86■■□□□ 1.57
RANBP3-211ENST00000587479 CEBPAP49715 358 aaPredicted RBP24.85■■□□□ 1.57
RANBP3-211ENST00000587479 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 APLP2Q06481 763 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 RSPH4AQ5TD94 716 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 CNTLNQ9NXG0 1405 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 C3P01024 1663 aa24.84■■□□□ 1.57
RANBP3-211ENST00000587479 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.57
RANBP3-211ENST00000587479 SETD1BQ9UPS6 1966 aaKnown RBP24.82■■□□□ 1.56
RANBP3-211ENST00000587479 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
RANBP3-211ENST00000587479 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
RANBP3-211ENST00000587479 MROH2AA6NES4 1674 aa24.79■■□□□ 1.56
RANBP3-211ENST00000587479 HSPA2P54652 639 aa24.79■■□□□ 1.56
RANBP3-211ENST00000587479 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
RANBP3-211ENST00000587479 UHRF1BP1Q6BDS2 1440 aa24.75■■□□□ 1.55
RANBP3-211ENST00000587479 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
RANBP3-211ENST00000587479 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
RANBP3-211ENST00000587479 MIA2Q96PC5 1412 aa24.74■■□□□ 1.55
RANBP3-211ENST00000587479 CLTCQ00610 1675 aaKnown RBP24.74■■□□□ 1.55
RANBP3-211ENST00000587479 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
RANBP3-211ENST00000587479 GGT6Q6P531 493 aa24.72■■□□□ 1.55
RANBP3-211ENST00000587479 PPP6R1Q9UPN7 881 aa24.7■■□□□ 1.54
RANBP3-211ENST00000587479 ZMYM3Q14202 1370 aa24.69■■□□□ 1.54
RANBP3-211ENST00000587479 NPATQ14207 1427 aa24.67■■□□□ 1.54
RANBP3-211ENST00000587479 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
RANBP3-211ENST00000587479 ILDR1Q86SU0 546 aaPredicted RBP24.66■■□□□ 1.54
RANBP3-211ENST00000587479 KIF3BO15066 747 aa24.64■■□□□ 1.54
RANBP3-211ENST00000587479 PTPN23Q9H3S7 1636 aa24.61■■□□□ 1.53
RANBP3-211ENST00000587479 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
RANBP3-211ENST00000587479 STRCQ7RTU9 1775 aa24.59■■□□□ 1.53
RANBP3-211ENST00000587479 DMRT2Q9Y5R5 561 aa24.58■■□□□ 1.53
RANBP3-211ENST00000587479 PTPRKQ15262 1439 aa24.57■■□□□ 1.52
RANBP3-211ENST00000587479 CROCC2H7BZ55 1655 aa24.56■■□□□ 1.52
RANBP3-211ENST00000587479 KDM5DQ9BY66 1539 aa24.56■■□□□ 1.52
RANBP3-211ENST00000587479 FGD6Q6ZV73 1430 aa24.56■■□□□ 1.52
RANBP3-211ENST00000587479 EIF2AK4Q9P2K8 1649 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms