RNA–Protein interactions for RNA: ENST00000587094.2

PTBP1-211, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 273 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-211ENST00000587094 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
PTBP1-211ENST00000587094 SCAPERQ9BY12 1400 aa18.77■□□□□ 0.6
PTBP1-211ENST00000587094 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
PTBP1-211ENST00000587094 ARHGAP5Q13017 1502 aa18.75■□□□□ 0.59
PTBP1-211ENST00000587094 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
PTBP1-211ENST00000587094 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
PTBP1-211ENST00000587094 POGZQ7Z3K3 1410 aa18.74■□□□□ 0.59
PTBP1-211ENST00000587094 CDC42BPAQ5VT25 1732 aa18.74■□□□□ 0.59
PTBP1-211ENST00000587094 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
PTBP1-211ENST00000587094 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
PTBP1-211ENST00000587094 FYCO1Q9BQS8 1478 aa18.74■□□□□ 0.59
PTBP1-211ENST00000587094 PREX2Q70Z35 1606 aa18.74■□□□□ 0.59
PTBP1-211ENST00000587094 PTPRMP28827 1452 aa18.72■□□□□ 0.59
PTBP1-211ENST00000587094 EFCAB2Q5VUJ9 269 aa18.71■□□□□ 0.59
PTBP1-211ENST00000587094 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
PTBP1-211ENST00000587094 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
PTBP1-211ENST00000587094 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
PTBP1-211ENST00000587094 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
PTBP1-211ENST00000587094 KDM5CP41229 1560 aa18.65■□□□□ 0.58
PTBP1-211ENST00000587094 MLECQ14165 292 aa18.65■□□□□ 0.58
PTBP1-211ENST00000587094 AFAP1Q8N556 730 aa18.65■□□□□ 0.58
PTBP1-211ENST00000587094 ABCC1P33527 1531 aa18.64■□□□□ 0.58
PTBP1-211ENST00000587094 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
PTBP1-211ENST00000587094 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
PTBP1-211ENST00000587094 ZNF518AQ6AHZ1 1483 aa18.63■□□□□ 0.57
PTBP1-211ENST00000587094 ABCA6Q8N139 1617 aa18.63■□□□□ 0.57
PTBP1-211ENST00000587094 TRAPPC8Q9Y2L5 1435 aa18.62■□□□□ 0.57
PTBP1-211ENST00000587094 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
PTBP1-211ENST00000587094 DIP2CQ9Y2E4 1556 aa18.62■□□□□ 0.57
PTBP1-211ENST00000587094 ATP10AO60312 1499 aa18.61■□□□□ 0.57
PTBP1-211ENST00000587094 LOC105371045A0A1W2PR82 267 aa18.6■□□□□ 0.57
PTBP1-211ENST00000587094 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
PTBP1-211ENST00000587094 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.57
PTBP1-211ENST00000587094 GPATCH8Q9UKJ3 1502 aaKnown RBP18.58■□□□□ 0.56
PTBP1-211ENST00000587094 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
PTBP1-211ENST00000587094 ZNF777Q9ULD5 760 aaPredicted RBP18.57■□□□□ 0.56
PTBP1-211ENST00000587094 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
PTBP1-211ENST00000587094 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
PTBP1-211ENST00000587094 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
PTBP1-211ENST00000587094 TIAM1Q13009 1591 aa18.53■□□□□ 0.56
PTBP1-211ENST00000587094 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.56
PTBP1-211ENST00000587094 HNRNPMP52272 730 aaKnown RBP eCLIP18.51■□□□□ 0.554e-7■■■■□ 21.4
PTBP1-211ENST00000587094 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
PTBP1-211ENST00000587094 REREQ9P2R6 1566 aa18.5■□□□□ 0.55
PTBP1-211ENST00000587094 CCNB3Q8WWL7 1395 aa18.49■□□□□ 0.55
PTBP1-211ENST00000587094 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
PTBP1-211ENST00000587094 CEBPAP49715 358 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-211ENST00000587094 HSPA2P54652 639 aa18.48■□□□□ 0.55
PTBP1-211ENST00000587094 ZNF644Q9H582 1327 aaPredicted RBP18.48■□□□□ 0.55
PTBP1-211ENST00000587094 CFDP1Q9UEE9 299 aaPredicted RBP18.47■□□□□ 0.55
PTBP1-211ENST00000587094 ILDR1Q86SU0 546 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-211ENST00000587094 C3P01024 1663 aa18.46■□□□□ 0.55
PTBP1-211ENST00000587094 INO80Q9ULG1 1556 aaPredicted RBP18.46■□□□□ 0.55
PTBP1-211ENST00000587094 AGLP35573 1532 aa18.44■□□□□ 0.54
PTBP1-211ENST00000587094 ATP7AQ04656 1500 aa18.44■□□□□ 0.54
PTBP1-211ENST00000587094 PREX1Q8TCU6 1659 aa18.43■□□□□ 0.54
PTBP1-211ENST00000587094 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
PTBP1-211ENST00000587094 NCOA2Q15596 1464 aa18.41■□□□□ 0.54
PTBP1-211ENST00000587094 KIAA1107Q9UPP5 1409 aa18.4■□□□□ 0.54
PTBP1-211ENST00000587094 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
PTBP1-211ENST00000587094 PLEKHH2Q8IVE3 1493 aa18.39■□□□□ 0.54
PTBP1-211ENST00000587094 MBD5Q9P267 1494 aa18.39■□□□□ 0.53
PTBP1-211ENST00000587094 PLXNC1O60486 1568 aa18.38■□□□□ 0.53
PTBP1-211ENST00000587094 ADGBQ8N7X0 1667 aa18.38■□□□□ 0.53
PTBP1-211ENST00000587094 CLTCQ00610 1675 aaKnown RBP18.36■□□□□ 0.53
PTBP1-211ENST00000587094 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
PTBP1-211ENST00000587094 CAMSAP2Q08AD1 1489 aa18.35■□□□□ 0.53
PTBP1-211ENST00000587094 A2MP01023 1474 aa18.34■□□□□ 0.53
PTBP1-211ENST00000587094 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
PTBP1-211ENST00000587094 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
PTBP1-211ENST00000587094 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
PTBP1-211ENST00000587094 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
PTBP1-211ENST00000587094 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
PTBP1-211ENST00000587094 UHRF1BP1Q6BDS2 1440 aa18.29■□□□□ 0.52
PTBP1-211ENST00000587094 CCDC141Q6ZP82 1450 aa18.28■□□□□ 0.52
PTBP1-211ENST00000587094 GGT6Q6P531 493 aa18.26■□□□□ 0.51
PTBP1-211ENST00000587094 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
PTBP1-211ENST00000587094 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
PTBP1-211ENST00000587094 MAP3K1Q13233 1512 aa18.25■□□□□ 0.51
PTBP1-211ENST00000587094 RTEL1-TNFRSF6BF6WH68 1400 aa18.24■□□□□ 0.51
PTBP1-211ENST00000587094 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
PTBP1-211ENST00000587094 DHX29Q7Z478 1369 aaKnown RBP18.21■□□□□ 0.51
PTBP1-211ENST00000587094 MYO3AQ8NEV4 1616 aa18.21■□□□□ 0.51
PTBP1-211ENST00000587094 MYOM3Q5VTT5 1437 aa18.19■□□□□ 0.5
PTBP1-211ENST00000587094 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
PTBP1-211ENST00000587094 ZNF142P52746 1687 aaPredicted RBP18.18■□□□□ 0.5
PTBP1-211ENST00000587094 NPATQ14207 1427 aa18.17■□□□□ 0.5
PTBP1-211ENST00000587094 KIF3BO15066 747 aa18.17■□□□□ 0.5
PTBP1-211ENST00000587094 FBXO41Q8TF61 875 aa18.17■□□□□ 0.5
PTBP1-211ENST00000587094 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
PTBP1-211ENST00000587094 CAMSAP1Q5T5Y3 1602 aa18.16■□□□□ 0.5
PTBP1-211ENST00000587094 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
PTBP1-211ENST00000587094 PTPN23Q9H3S7 1636 aa18.15■□□□□ 0.5
PTBP1-211ENST00000587094 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
PTBP1-211ENST00000587094 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PTBP1-211ENST00000587094 NCOA1Q15788 1441 aa18.13■□□□□ 0.49
PTBP1-211ENST00000587094 MIA2Q96PC5 1412 aa18.13■□□□□ 0.49
PTBP1-211ENST00000587094 CFAP65Q6ZU64 1925 aaKnown RBP18.12■□□□□ 0.49
PTBP1-211ENST00000587094 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
PTBP1-211ENST00000587094 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms