RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 ADGRL1O94910 1474 aa21.12■□□□□ 0.97
SMARCA4-210ENST00000586892 EHBP1L1Q8N3D4 1523 aa21.11■□□□□ 0.97
SMARCA4-210ENST00000586892 CDC42BPAQ5VT25 1732 aa21.1■□□□□ 0.97
SMARCA4-210ENST00000586892 TIAM1Q13009 1591 aa21.09■□□□□ 0.97
SMARCA4-210ENST00000586892 SCAPERQ9BY12 1400 aa21.08■□□□□ 0.97
SMARCA4-210ENST00000586892 POGZQ7Z3K3 1410 aa21.05■□□□□ 0.96
SMARCA4-210ENST00000586892 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
SMARCA4-210ENST00000586892 MAP3K1Q13233 1512 aa21.04■□□□□ 0.96
SMARCA4-210ENST00000586892 GPATCH8Q9UKJ3 1502 aaKnown RBP21.04■□□□□ 0.96
SMARCA4-210ENST00000586892 CCNB3Q8WWL7 1395 aa21.02■□□□□ 0.96
SMARCA4-210ENST00000586892 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 ABCC1P33527 1531 aa21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 ARHGEF40Q8TER5 1519 aa21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
SMARCA4-210ENST00000586892 ITSN2Q9NZM3 1697 aa20.99■□□□□ 0.95
SMARCA4-210ENST00000586892 KDM4FA0A1W2PPD8 638 aa20.99■□□□□ 0.95
SMARCA4-210ENST00000586892 LRRC9Q6ZRR7 1453 aa20.99■□□□□ 0.95
SMARCA4-210ENST00000586892 ZFYVE16Q7Z3T8 1539 aa20.98■□□□□ 0.95
SMARCA4-210ENST00000586892 CFDP1Q9UEE9 299 aaPredicted RBP20.97■□□□□ 0.95
SMARCA4-210ENST00000586892 KDM5CP41229 1560 aa20.97■□□□□ 0.95
SMARCA4-210ENST00000586892 SAMD9LQ8IVG5 1584 aa20.97■□□□□ 0.95
SMARCA4-210ENST00000586892 NCOA2Q15596 1464 aa20.96■□□□□ 0.95
SMARCA4-210ENST00000586892 ZNF777Q9ULD5 760 aaPredicted RBP20.94■□□□□ 0.94
SMARCA4-210ENST00000586892 PLEKHH2Q8IVE3 1493 aa20.94■□□□□ 0.94
SMARCA4-210ENST00000586892 ARHGEF12Q9NZN5 1544 aa20.94■□□□□ 0.94
SMARCA4-210ENST00000586892 APLP2Q06481 763 aa20.93■□□□□ 0.94
SMARCA4-210ENST00000586892 YEATS2Q9ULM3 1422 aa20.93■□□□□ 0.94
SMARCA4-210ENST00000586892 AFAP1Q8N556 730 aa20.92■□□□□ 0.94
SMARCA4-210ENST00000586892 HECW2Q9P2P5 1572 aa20.92■□□□□ 0.94
SMARCA4-210ENST00000586892 SYCP2Q9BX26 1530 aa20.91■□□□□ 0.94
SMARCA4-210ENST00000586892 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
SMARCA4-210ENST00000586892 TRAPPC8Q9Y2L5 1435 aa20.91■□□□□ 0.94
SMARCA4-210ENST00000586892 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
SMARCA4-210ENST00000586892 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
SMARCA4-210ENST00000586892 ATP10AO60312 1499 aa20.87■□□□□ 0.93
SMARCA4-210ENST00000586892 ARID4BQ4LE39 1312 aaPredicted RBP20.86■□□□□ 0.93
SMARCA4-210ENST00000586892 BCORL1Q5H9F3 1711 aa20.85■□□□□ 0.93
SMARCA4-210ENST00000586892 HNRNPMP52272 730 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMARCA4-210ENST00000586892 C9orf84Q5VXU9 1444 aa20.85■□□□□ 0.93
SMARCA4-210ENST00000586892 MYT1LQ9UL68 1186 aa20.84■□□□□ 0.93
SMARCA4-210ENST00000586892 DIP2CQ9Y2E4 1556 aa20.84■□□□□ 0.93
SMARCA4-210ENST00000586892 SIGLEC1Q9BZZ2 1709 aa20.83■□□□□ 0.92
SMARCA4-210ENST00000586892 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.92
SMARCA4-210ENST00000586892 KIDINS220Q9ULH0 1771 aa20.82■□□□□ 0.92
SMARCA4-210ENST00000586892 ABCA6Q8N139 1617 aa20.82■□□□□ 0.92
SMARCA4-210ENST00000586892 ZNF644Q9H582 1327 aaPredicted RBP20.82■□□□□ 0.92
SMARCA4-210ENST00000586892 CAMSAP2Q08AD1 1489 aa20.81■□□□□ 0.92
SMARCA4-210ENST00000586892 REREQ9P2R6 1566 aa20.81■□□□□ 0.92
SMARCA4-210ENST00000586892 MBD5Q9P267 1494 aa20.81■□□□□ 0.92
SMARCA4-210ENST00000586892 SPAG9O60271 1321 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-210ENST00000586892 MYOM3Q5VTT5 1437 aa20.79■□□□□ 0.92
SMARCA4-210ENST00000586892 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
SMARCA4-210ENST00000586892 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
SMARCA4-210ENST00000586892 MIA2Q96PC5 1412 aa20.78■□□□□ 0.92
SMARCA4-210ENST00000586892 MADDQ8WXG6 1647 aa20.76■□□□□ 0.91
SMARCA4-210ENST00000586892 RSPH4AQ5TD94 716 aa20.75■□□□□ 0.91
SMARCA4-210ENST00000586892 CCDC141Q6ZP82 1450 aa20.75■□□□□ 0.91
SMARCA4-210ENST00000586892 ARHGEF5Q12774 1597 aa20.74■□□□□ 0.91
SMARCA4-210ENST00000586892 AGLP35573 1532 aa20.73■□□□□ 0.91
SMARCA4-210ENST00000586892 RTEL1-TNFRSF6BF6WH68 1400 aa20.72■□□□□ 0.91
SMARCA4-210ENST00000586892 PTPRMP28827 1452 aa20.71■□□□□ 0.91
SMARCA4-210ENST00000586892 FER1L4A9Z1Z3 1794 aa20.7■□□□□ 0.9
SMARCA4-210ENST00000586892 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.9
SMARCA4-210ENST00000586892 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
SMARCA4-210ENST00000586892 MLECQ14165 292 aa20.69■□□□□ 0.9
SMARCA4-210ENST00000586892 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
SMARCA4-210ENST00000586892 FGD6Q6ZV73 1430 aa20.67■□□□□ 0.9
SMARCA4-210ENST00000586892 A2MP01023 1474 aa20.67■□□□□ 0.9
SMARCA4-210ENST00000586892 PTPN23Q9H3S7 1636 aa20.67■□□□□ 0.9
SMARCA4-210ENST00000586892 TSPY4P0CV99 314 aa20.65■□□□□ 0.9
SMARCA4-210ENST00000586892 TSPY10P0CW01 314 aa20.65■□□□□ 0.9
SMARCA4-210ENST00000586892 MAST1Q9Y2H9 1570 aa20.63■□□□□ 0.89
SMARCA4-210ENST00000586892 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
SMARCA4-210ENST00000586892 CROCC2H7BZ55 1655 aa20.59■□□□□ 0.89
SMARCA4-210ENST00000586892 DHX29Q7Z478 1369 aaKnown RBP20.59■□□□□ 0.89
SMARCA4-210ENST00000586892 SHANK2Q9UPX8 1470 aa20.57■□□□□ 0.88
SMARCA4-210ENST00000586892 DNMT1P26358 1616 aaKnown RBP20.57■□□□□ 0.88
SMARCA4-210ENST00000586892 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
SMARCA4-210ENST00000586892 ABCC5O15440 1437 aa20.55■□□□□ 0.88
SMARCA4-210ENST00000586892 CNTLNQ9NXG0 1405 aa20.55■□□□□ 0.88
SMARCA4-210ENST00000586892 DAPK1P53355 1430 aa20.54■□□□□ 0.88
SMARCA4-210ENST00000586892 MROH2AA6NES4 1674 aa20.51■□□□□ 0.87
SMARCA4-210ENST00000586892 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
SMARCA4-210ENST00000586892 C3P01024 1663 aa20.51■□□□□ 0.87
SMARCA4-210ENST00000586892 GGT6Q6P531 493 aa20.5■□□□□ 0.87
SMARCA4-210ENST00000586892 PLPPR3Q6T4P5 718 aa20.5■□□□□ 0.87
SMARCA4-210ENST00000586892 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-210ENST00000586892 EIF2AK4Q9P2K8 1649 aaKnown RBP20.49■□□□□ 0.87
SMARCA4-210ENST00000586892 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
SMARCA4-210ENST00000586892 KIF3BO15066 747 aa20.48■□□□□ 0.87
SMARCA4-210ENST00000586892 CLTCQ00610 1675 aaKnown RBP20.48■□□□□ 0.87
SMARCA4-210ENST00000586892 CEBPAP49715 358 aaPredicted RBP20.47■□□□□ 0.87
SMARCA4-210ENST00000586892 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
SMARCA4-210ENST00000586892 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
SMARCA4-210ENST00000586892 SETD1BQ9UPS6 1966 aaKnown RBP20.46■□□□□ 0.87
SMARCA4-210ENST00000586892 KIF15Q9NS87 1388 aa20.46■□□□□ 0.87
SMARCA4-210ENST00000586892 LMTK3Q96Q04 1460 aa20.45■□□□□ 0.86
SMARCA4-210ENST00000586892 RNF17Q9BXT8 1623 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms