RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
ACTN4-209ENST00000586538 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
ACTN4-209ENST00000586538 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
ACTN4-209ENST00000586538 LRRIQ1Q96JM4 1722 aa18.16■□□□□ 0.5
ACTN4-209ENST00000586538 BCORL1Q5H9F3 1711 aa18.15■□□□□ 0.5
ACTN4-209ENST00000586538 ADAMTSL3P82987 1691 aa18.15■□□□□ 0.5
ACTN4-209ENST00000586538 ZNF518AQ6AHZ1 1483 aa18.14■□□□□ 0.49
ACTN4-209ENST00000586538 HECW2Q9P2P5 1572 aa18.11■□□□□ 0.49
ACTN4-209ENST00000586538 PREX2Q70Z35 1606 aa18.1■□□□□ 0.49
ACTN4-209ENST00000586538 PTPRMP28827 1452 aa18.09■□□□□ 0.49
ACTN4-209ENST00000586538 C9orf84Q5VXU9 1444 aa18.07■□□□□ 0.48
ACTN4-209ENST00000586538 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
ACTN4-209ENST00000586538 CDC42BPBQ9Y5S2 1711 aa18.06■□□□□ 0.48
ACTN4-209ENST00000586538 KDM5CP41229 1560 aa18.06■□□□□ 0.48
ACTN4-209ENST00000586538 ATP10AO60312 1499 aa18.06■□□□□ 0.48
ACTN4-209ENST00000586538 YEATS2Q9ULM3 1422 aa18.06■□□□□ 0.48
ACTN4-209ENST00000586538 ABCC1P33527 1531 aa18.03■□□□□ 0.48
ACTN4-209ENST00000586538 MYT1LQ9UL68 1186 aa18.03■□□□□ 0.48
ACTN4-209ENST00000586538 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
ACTN4-209ENST00000586538 CDC42BPAQ5VT25 1732 aa18.02■□□□□ 0.48
ACTN4-209ENST00000586538 RIMS1Q86UR5 1692 aaKnown RBP18.02■□□□□ 0.47
ACTN4-209ENST00000586538 MTUS2Q5JR59 1369 aa18.02■□□□□ 0.47
ACTN4-209ENST00000586538 ITSN2Q9NZM3 1697 aa18■□□□□ 0.47
ACTN4-209ENST00000586538 MLH3Q9UHC1 1453 aa18■□□□□ 0.47
ACTN4-209ENST00000586538 REREQ9P2R6 1566 aa18■□□□□ 0.47
ACTN4-209ENST00000586538 PLEKHH2Q8IVE3 1493 aa17.99■□□□□ 0.47
ACTN4-209ENST00000586538 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
ACTN4-209ENST00000586538 EHBP1L1Q8N3D4 1523 aa17.98■□□□□ 0.47
ACTN4-209ENST00000586538 CCNB3Q8WWL7 1395 aa17.97■□□□□ 0.47
ACTN4-209ENST00000586538 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
ACTN4-209ENST00000586538 DIP2CQ9Y2E4 1556 aa17.96■□□□□ 0.46
ACTN4-209ENST00000586538 GPATCH8Q9UKJ3 1502 aaKnown RBP17.95■□□□□ 0.46
ACTN4-209ENST00000586538 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
ACTN4-209ENST00000586538 MLECQ14165 292 aa17.94■□□□□ 0.46
ACTN4-209ENST00000586538 CFDP1Q9UEE9 299 aaPredicted RBP17.94■□□□□ 0.46
ACTN4-209ENST00000586538 SIGLEC1Q9BZZ2 1709 aa17.94■□□□□ 0.46
ACTN4-209ENST00000586538 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
ACTN4-209ENST00000586538 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
ACTN4-209ENST00000586538 SAMD9LQ8IVG5 1584 aa17.92■□□□□ 0.46
ACTN4-209ENST00000586538 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
ACTN4-209ENST00000586538 ABCA6Q8N139 1617 aa17.92■□□□□ 0.46
ACTN4-209ENST00000586538 AGLP35573 1532 aa17.92■□□□□ 0.46
ACTN4-209ENST00000586538 SYCP2Q9BX26 1530 aa17.91■□□□□ 0.46
ACTN4-209ENST00000586538 ESF1Q9H501 851 aaKnown RBP17.9■□□□□ 0.46
ACTN4-209ENST00000586538 LMTK3Q96Q04 1460 aa17.89■□□□□ 0.45
ACTN4-209ENST00000586538 KIDINS220Q9ULH0 1771 aa17.88■□□□□ 0.45
ACTN4-209ENST00000586538 SUPT6HQ7KZ85 1726 aaKnown RBP17.87■□□□□ 0.45
ACTN4-209ENST00000586538 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
ACTN4-209ENST00000586538 TIAM1Q13009 1591 aa17.87■□□□□ 0.45
ACTN4-209ENST00000586538 VPS8Q8N3P4 1428 aa17.86■□□□□ 0.45
ACTN4-209ENST00000586538 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
ACTN4-209ENST00000586538 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
ACTN4-209ENST00000586538 PLPPR3Q6T4P5 718 aa17.84■□□□□ 0.45
ACTN4-209ENST00000586538 PREX1Q8TCU6 1659 aa17.83■□□□□ 0.45
ACTN4-209ENST00000586538 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.44
ACTN4-209ENST00000586538 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
ACTN4-209ENST00000586538 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
ACTN4-209ENST00000586538 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
ACTN4-209ENST00000586538 MAP3K1Q13233 1512 aa17.79■□□□□ 0.44
ACTN4-209ENST00000586538 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
ACTN4-209ENST00000586538 UHRF1BP1Q6BDS2 1440 aa17.79■□□□□ 0.44
ACTN4-209ENST00000586538 A2MP01023 1474 aa17.78■□□□□ 0.44
ACTN4-209ENST00000586538 SETD1BQ9UPS6 1966 aaKnown RBP17.78■□□□□ 0.44
ACTN4-209ENST00000586538 RTEL1-TNFRSF6BF6WH68 1400 aa17.78■□□□□ 0.44
ACTN4-209ENST00000586538 PLXNC1O60486 1568 aa17.77■□□□□ 0.44
ACTN4-209ENST00000586538 MROH2AA6NES4 1674 aa17.77■□□□□ 0.43
ACTN4-209ENST00000586538 CCDC141Q6ZP82 1450 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 LRRC9Q6ZRR7 1453 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 C3P01024 1663 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 MBD5Q9P267 1494 aa17.75■□□□□ 0.43
ACTN4-209ENST00000586538 APLP2Q06481 763 aa17.74■□□□□ 0.43
ACTN4-209ENST00000586538 CAMSAP2Q08AD1 1489 aa17.74■□□□□ 0.43
ACTN4-209ENST00000586538 CEBPAP49715 358 aaPredicted RBP17.72■□□□□ 0.43
ACTN4-209ENST00000586538 HSPA2P54652 639 aa17.72■□□□□ 0.43
ACTN4-209ENST00000586538 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
ACTN4-209ENST00000586538 NPATQ14207 1427 aa17.72■□□□□ 0.43
ACTN4-209ENST00000586538 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
ACTN4-209ENST00000586538 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.42
ACTN4-209ENST00000586538 ARHGEF5Q12774 1597 aa17.7■□□□□ 0.42
ACTN4-209ENST00000586538 FAM135AQ9P2D6 1515 aa17.69■□□□□ 0.42
ACTN4-209ENST00000586538 TSPY4P0CV99 314 aa17.69■□□□□ 0.42
ACTN4-209ENST00000586538 TSPY10P0CW01 314 aa17.69■□□□□ 0.42
ACTN4-209ENST00000586538 MIA2Q96PC5 1412 aa17.68■□□□□ 0.42
ACTN4-209ENST00000586538 DHX29Q7Z478 1369 aaKnown RBP17.67■□□□□ 0.42
ACTN4-209ENST00000586538 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
ACTN4-209ENST00000586538 GGT6Q6P531 493 aa17.66■□□□□ 0.42
ACTN4-209ENST00000586538 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
ACTN4-209ENST00000586538 CLTCQ00610 1675 aaKnown RBP17.65■□□□□ 0.42
ACTN4-209ENST00000586538 FBXO41Q8TF61 875 aa17.65■□□□□ 0.42
ACTN4-209ENST00000586538 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
ACTN4-209ENST00000586538 KDM5DQ9BY66 1539 aa17.6■□□□□ 0.41
ACTN4-209ENST00000586538 KIF3BO15066 747 aa17.59■□□□□ 0.41
ACTN4-209ENST00000586538 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-209ENST00000586538 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.41
ACTN4-209ENST00000586538 PTPRTO14522 1441 aa17.58■□□□□ 0.41
ACTN4-209ENST00000586538 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.4
ACTN4-209ENST00000586538 STRCQ7RTU9 1775 aa17.57■□□□□ 0.4
ACTN4-209ENST00000586538 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms