RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 MAP3K13O43283 966 aa11.58□□□□□ -0.56
TPM4-203ENST00000586193 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
TPM4-203ENST00000586193 C1orf115Q9H7X2 142 aa11.58□□□□□ -0.56
TPM4-203ENST00000586193 FAM117AQ9C073 453 aa11.55□□□□□ -0.56
TPM4-203ENST00000586193 ZNF316A6NFI3 1004 aaPredicted RBP11.54□□□□□ -0.56
TPM4-203ENST00000586193 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
TPM4-203ENST00000586193 ARID3CA6NKF2 412 aa11.52□□□□□ -0.57
TPM4-203ENST00000586193 PAK3O75914 559 aaPredicted RBP11.49□□□□□ -0.57
TPM4-203ENST00000586193 APBB1O00213 710 aa11.48□□□□□ -0.57
TPM4-203ENST00000586193 DPYSL4O14531 572 aa11.48□□□□□ -0.57
TPM4-203ENST00000586193 PPP1R15BQ5SWA1 713 aa11.48□□□□□ -0.57
TPM4-203ENST00000586193 NPM2Q86SE8 214 aaKnown RBP11.47□□□□□ -0.57
TPM4-203ENST00000586193 PLEKHG3A1L390 1219 aa11.46□□□□□ -0.57
TPM4-203ENST00000586193 GPR37O15354 613 aa11.45□□□□□ -0.58
TPM4-203ENST00000586193 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
TPM4-203ENST00000586193 GOLGA2Q08379 1002 aa11.44□□□□□ -0.58
TPM4-203ENST00000586193 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
TPM4-203ENST00000586193 DDRGK1Q96HY6 314 aa11.43□□□□□ -0.58
TPM4-203ENST00000586193 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
TPM4-203ENST00000586193 FLIIQ13045 1269 aa11.42□□□□□ -0.58
TPM4-203ENST00000586193 PDIA6Q15084 440 aa11.42□□□□□ -0.58
TPM4-203ENST00000586193 GPHNQ9NQX3 736 aaPredicted RBP11.42□□□□□ -0.58
TPM4-203ENST00000586193 MINK1Q8N4C8 1332 aaPredicted RBP11.41□□□□□ -0.58
TPM4-203ENST00000586193 CCDC102AQ96A19 550 aa11.39□□□□□ -0.59
TPM4-203ENST00000586193 PARP9Q8IXQ6 854 aa11.37□□□□□ -0.59
TPM4-203ENST00000586193 IRF6O14896 467 aa11.36□□□□□ -0.59
TPM4-203ENST00000586193 PDIA4P13667 645 aaKnown RBP11.36□□□□□ -0.59
TPM4-203ENST00000586193 MAP2K5Q13163 448 aa11.36□□□□□ -0.59
TPM4-203ENST00000586193 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
TPM4-203ENST00000586193 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
TPM4-203ENST00000586193 DSG2Q14126 1118 aa11.35□□□□□ -0.59
TPM4-203ENST00000586193 AMHR2Q16671 573 aa11.35□□□□□ -0.59
TPM4-203ENST00000586193 GRXCR2A6NFK2 248 aa11.33□□□□□ -0.6
TPM4-203ENST00000586193 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
TPM4-203ENST00000586193 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
TPM4-203ENST00000586193 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
TPM4-203ENST00000586193 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
TPM4-203ENST00000586193 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
TPM4-203ENST00000586193 A6NJR5 290 aa11.29□□□□□ -0.6
TPM4-203ENST00000586193 TRAK2O60296 914 aa11.29□□□□□ -0.6
TPM4-203ENST00000586193 GOPCQ9HD26 462 aa11.29□□□□□ -0.6
TPM4-203ENST00000586193 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
TPM4-203ENST00000586193 GNPATO15228 680 aa11.28□□□□□ -0.6
TPM4-203ENST00000586193 FECHP22830 423 aa11.27□□□□□ -0.61
TPM4-203ENST00000586193 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM4-203ENST00000586193 TTLL12Q14166 644 aaPredicted RBP11.27□□□□□ -0.61
TPM4-203ENST00000586193 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
TPM4-203ENST00000586193 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
TPM4-203ENST00000586193 FOXK1P85037 733 aa11.25□□□□□ -0.61
TPM4-203ENST00000586193 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
TPM4-203ENST00000586193 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.25□□□□□ -0.614e-8■■■□□ 14.8
TPM4-203ENST00000586193 TMC2Q8TDI7 906 aa11.24□□□□□ -0.61
TPM4-203ENST00000586193 CCDC9Q9Y3X0 531 aaKnown RBP11.24□□□□□ -0.61
TPM4-203ENST00000586193 OSBPP22059 807 aa11.23□□□□□ -0.61
TPM4-203ENST00000586193 HIC1Q14526 733 aa11.23□□□□□ -0.61
TPM4-203ENST00000586193 FCHSD2O94868 740 aa11.22□□□□□ -0.61
TPM4-203ENST00000586193 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
TPM4-203ENST00000586193 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
TPM4-203ENST00000586193 MS4A1P11836 297 aa11.21□□□□□ -0.61
TPM4-203ENST00000586193 GIGYF2Q6Y7W6 1299 aaKnown RBP11.21□□□□□ -0.61
TPM4-203ENST00000586193 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
TPM4-203ENST00000586193 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
TPM4-203ENST00000586193 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
TPM4-203ENST00000586193 MCM6Q14566 821 aa11.18□□□□□ -0.62
TPM4-203ENST00000586193 MICALL2Q8IY33 904 aa11.18□□□□□ -0.62
TPM4-203ENST00000586193 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
TPM4-203ENST00000586193 MS4A3Q96HJ5 214 aa11.17□□□□□ -0.62
TPM4-203ENST00000586193 REPIN1Q9BWE0 567 aaKnown RBP11.17□□□□□ -0.62
TPM4-203ENST00000586193 DDX12PQ92771 950 aa11.15□□□□□ -0.62
TPM4-203ENST00000586193 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
TPM4-203ENST00000586193 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
TPM4-203ENST00000586193 UPF1Q92900 1129 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM4-203ENST00000586193 C2orf72A6NCS6 295 aa11.12□□□□□ -0.63
TPM4-203ENST00000586193 TTLL13PA6NNM8 815 aa11.12□□□□□ -0.63
TPM4-203ENST00000586193 PTGER2P43116 358 aa11.11□□□□□ -0.63
TPM4-203ENST00000586193 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
TPM4-203ENST00000586193 PTGDRQ13258 359 aa11.11□□□□□ -0.63
TPM4-203ENST00000586193 POM121Q96HA1 1249 aa11.11□□□□□ -0.63
TPM4-203ENST00000586193 TIE1P35590 1138 aa11.1□□□□□ -0.63
TPM4-203ENST00000586193 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
TPM4-203ENST00000586193 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
TPM4-203ENST00000586193 CCDC97Q96F63 343 aaPredicted RBP11.09□□□□□ -0.63
TPM4-203ENST00000586193 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
TPM4-203ENST00000586193 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
TPM4-203ENST00000586193 ATP1B4Q9UN42 357 aaPredicted RBP11.08□□□□□ -0.64
TPM4-203ENST00000586193 KIF3CO14782 793 aa11.07□□□□□ -0.64
TPM4-203ENST00000586193 RAD21O60216 631 aa11.07□□□□□ -0.64
TPM4-203ENST00000586193 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
TPM4-203ENST00000586193 KCTD17Q8N5Z5 321 aa11.07□□□□□ -0.64
TPM4-203ENST00000586193 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
TPM4-203ENST00000586193 PROCA1Q8NCQ7 364 aaPredicted RBP11.05□□□□□ -0.64
TPM4-203ENST00000586193 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
TPM4-203ENST00000586193 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
TPM4-203ENST00000586193 CLCN1P35523 988 aa11.04□□□□□ -0.64
TPM4-203ENST00000586193 MDM2Q00987 491 aaPredicted RBP11.04□□□□□ -0.64
TPM4-203ENST00000586193 AEBP1Q8IUX7 1158 aa11.04□□□□□ -0.64
TPM4-203ENST00000586193 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
TPM4-203ENST00000586193 SSTR3P32745 418 aaPredicted RBP11.03□□□□□ -0.64
TPM4-203ENST00000586193 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
TPM4-203ENST00000586193 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms