RNA–Protein interactions for RNA: ENST00000586190.1

CACNA1A-207, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-207ENST00000586190 ZFYVE16Q7Z3T8 1539 aa30.12■■■□□ 2.41
CACNA1A-207ENST00000586190 EFCAB2Q5VUJ9 269 aa30.12■■■□□ 2.41
CACNA1A-207ENST00000586190 CLIP1P30622 1438 aa30.11■■■□□ 2.41
CACNA1A-207ENST00000586190 MADDQ8WXG6 1647 aa30.11■■■□□ 2.41
CACNA1A-207ENST00000586190 CASKIN1Q8WXD9 1431 aa30.1■■■□□ 2.41
CACNA1A-207ENST00000586190 CCDC18Q5T9S5 1454 aa30.07■■■□□ 2.4
CACNA1A-207ENST00000586190 YEATS2Q9ULM3 1422 aa30.07■■■□□ 2.4
CACNA1A-207ENST00000586190 PCF11O94913 1555 aaKnown RBP30.04■■■□□ 2.4
CACNA1A-207ENST00000586190 SIGLEC1Q9BZZ2 1709 aa30.02■■■□□ 2.4
CACNA1A-207ENST00000586190 ARHGAP5Q13017 1502 aa30■■■□□ 2.39
CACNA1A-207ENST00000586190 RIMS1Q86UR5 1692 aaKnown RBP29.99■■■□□ 2.39
CACNA1A-207ENST00000586190 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
CACNA1A-207ENST00000586190 ZNF518AQ6AHZ1 1483 aa29.98■■■□□ 2.39
CACNA1A-207ENST00000586190 CDC42BPBQ9Y5S2 1711 aa29.97■■■□□ 2.39
CACNA1A-207ENST00000586190 ATP10AO60312 1499 aa29.97■■■□□ 2.39
CACNA1A-207ENST00000586190 KDM5CP41229 1560 aa29.95■■■□□ 2.39
CACNA1A-207ENST00000586190 PREX2Q70Z35 1606 aa29.93■■■□□ 2.38
CACNA1A-207ENST00000586190 C9orf84Q5VXU9 1444 aa29.93■■■□□ 2.38
CACNA1A-207ENST00000586190 ILDR1Q86SU0 546 aaPredicted RBP29.91■■■□□ 2.38
CACNA1A-207ENST00000586190 LMTK3Q96Q04 1460 aa29.88■■■□□ 2.37
CACNA1A-207ENST00000586190 FER1L4A9Z1Z3 1794 aa29.88■■■□□ 2.37
CACNA1A-207ENST00000586190 AFAP1Q8N556 730 aa29.87■■■□□ 2.37
CACNA1A-207ENST00000586190 ARHGEF12Q9NZN5 1544 aa29.86■■■□□ 2.37
CACNA1A-207ENST00000586190 ABCC1P33527 1531 aa29.85■■■□□ 2.37
CACNA1A-207ENST00000586190 CDC42BPAQ5VT25 1732 aa29.85■■■□□ 2.37
CACNA1A-207ENST00000586190 MLH3Q9UHC1 1453 aa29.84■■■□□ 2.37
CACNA1A-207ENST00000586190 REREQ9P2R6 1566 aa29.83■■■□□ 2.37
CACNA1A-207ENST00000586190 MLECQ14165 292 aa29.82■■■□□ 2.36
CACNA1A-207ENST00000586190 ITSN2Q9NZM3 1697 aa29.81■■■□□ 2.36
CACNA1A-207ENST00000586190 DIP2CQ9Y2E4 1556 aa29.81■■■□□ 2.36
CACNA1A-207ENST00000586190 TRAPPC8Q9Y2L5 1435 aa29.78■■■□□ 2.36
CACNA1A-207ENST00000586190 ABCA6Q8N139 1617 aa29.75■■■□□ 2.35
CACNA1A-207ENST00000586190 GPATCH8Q9UKJ3 1502 aaKnown RBP29.73■■■□□ 2.35
CACNA1A-207ENST00000586190 MYT1LQ9UL68 1186 aa29.72■■■□□ 2.35
CACNA1A-207ENST00000586190 AGLP35573 1532 aa29.71■■■□□ 2.35
CACNA1A-207ENST00000586190 KIDINS220Q9ULH0 1771 aa29.7■■■□□ 2.35
CACNA1A-207ENST00000586190 SAMD9LQ8IVG5 1584 aa29.69■■■□□ 2.34
CACNA1A-207ENST00000586190 PLPPR3Q6T4P5 718 aa29.68■■■□□ 2.34
CACNA1A-207ENST00000586190 KIAA1107Q9UPP5 1409 aa29.65■■■□□ 2.34
CACNA1A-207ENST00000586190 PREX1Q8TCU6 1659 aa29.64■■■□□ 2.34
CACNA1A-207ENST00000586190 SETD1BQ9UPS6 1966 aaKnown RBP29.64■■■□□ 2.34
CACNA1A-207ENST00000586190 MTUS2Q5JR59 1369 aa29.64■■■□□ 2.33
CACNA1A-207ENST00000586190 PLEKHH2Q8IVE3 1493 aa29.63■■■□□ 2.33
CACNA1A-207ENST00000586190 SYCP2Q9BX26 1530 aa29.63■■■□□ 2.33
CACNA1A-207ENST00000586190 HSPA2P54652 639 aa29.63■■■□□ 2.33
CACNA1A-207ENST00000586190 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
CACNA1A-207ENST00000586190 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
CACNA1A-207ENST00000586190 CEP162Q5TB80 1403 aa29.62■■■□□ 2.33
CACNA1A-207ENST00000586190 CFDP1Q9UEE9 299 aaPredicted RBP29.6■■■□□ 2.33
CACNA1A-207ENST00000586190 CEBPAP49715 358 aaPredicted RBP29.58■■■□□ 2.33
CACNA1A-207ENST00000586190 EHBP1L1Q8N3D4 1523 aa29.57■■■□□ 2.32
CACNA1A-207ENST00000586190 FBXO41Q8TF61 875 aa29.57■■■□□ 2.32
CACNA1A-207ENST00000586190 SPAG9O60271 1321 aaKnown RBP29.56■■■□□ 2.32
CACNA1A-207ENST00000586190 HNRNPMP52272 730 aaKnown RBP eCLIP29.56■■■□□ 2.32
CACNA1A-207ENST00000586190 C3P01024 1663 aa29.54■■■□□ 2.32
CACNA1A-207ENST00000586190 CNTLNQ9NXG0 1405 aa29.53■■■□□ 2.32
CACNA1A-207ENST00000586190 TIAM1Q13009 1591 aa29.52■■■□□ 2.32
CACNA1A-207ENST00000586190 ATP7AQ04656 1500 aa29.52■■■□□ 2.32
CACNA1A-207ENST00000586190 INO80Q9ULG1 1556 aaPredicted RBP29.52■■■□□ 2.32
CACNA1A-207ENST00000586190 ESF1Q9H501 851 aaKnown RBP29.51■■■□□ 2.31
CACNA1A-207ENST00000586190 UHRF1BP1Q6BDS2 1440 aa29.5■■■□□ 2.31
CACNA1A-207ENST00000586190 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
CACNA1A-207ENST00000586190 MROH2AA6NES4 1674 aa29.45■■■□□ 2.31
CACNA1A-207ENST00000586190 SUPT6HQ7KZ85 1726 aaKnown RBP29.44■■■□□ 2.3
CACNA1A-207ENST00000586190 A2MP01023 1474 aa29.43■■■□□ 2.3
CACNA1A-207ENST00000586190 MBD5Q9P267 1494 aa29.43■■■□□ 2.3
CACNA1A-207ENST00000586190 STRCQ7RTU9 1775 aa29.41■■■□□ 2.3
CACNA1A-207ENST00000586190 ADGBQ8N7X0 1667 aa29.4■■■□□ 2.3
CACNA1A-207ENST00000586190 ZNF644Q9H582 1327 aaPredicted RBP29.4■■■□□ 2.3
CACNA1A-207ENST00000586190 RTEL1-TNFRSF6BF6WH68 1400 aa29.39■■■□□ 2.3
CACNA1A-207ENST00000586190 NPATQ14207 1427 aa29.38■■■□□ 2.29
CACNA1A-207ENST00000586190 DMRT2Q9Y5R5 561 aa29.38■■■□□ 2.29
CACNA1A-207ENST00000586190 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
CACNA1A-207ENST00000586190 ZMYM3Q14202 1370 aa29.35■■■□□ 2.29
CACNA1A-207ENST00000586190 PPP6R1Q9UPN7 881 aa29.34■■■□□ 2.29
CACNA1A-207ENST00000586190 VPS8Q8N3P4 1428 aa29.34■■■□□ 2.29
CACNA1A-207ENST00000586190 RSPH4AQ5TD94 716 aa29.32■■■□□ 2.28
CACNA1A-207ENST00000586190 CERKQ8TCT0 537 aa29.31■■■□□ 2.28
CACNA1A-207ENST00000586190 CLTCQ00610 1675 aaKnown RBP29.31■■■□□ 2.28
CACNA1A-207ENST00000586190 LOC105371045A0A1W2PR82 267 aa29.29■■■□□ 2.28
CACNA1A-207ENST00000586190 CCDC141Q6ZP82 1450 aa29.29■■■□□ 2.28
CACNA1A-207ENST00000586190 PTPRTO14522 1441 aa29.28■■■□□ 2.28
CACNA1A-207ENST00000586190 CAMSAP2Q08AD1 1489 aa29.28■■■□□ 2.28
CACNA1A-207ENST00000586190 DHX29Q7Z478 1369 aaKnown RBP29.26■■■□□ 2.28
CACNA1A-207ENST00000586190 LRRC9Q6ZRR7 1453 aa29.26■■■□□ 2.27
CACNA1A-207ENST00000586190 MAP3K1Q13233 1512 aa29.25■■■□□ 2.27
CACNA1A-207ENST00000586190 GGT6Q6P531 493 aa29.25■■■□□ 2.27
CACNA1A-207ENST00000586190 ARHGEF5Q12774 1597 aa29.23■■■□□ 2.27
CACNA1A-207ENST00000586190 NCOA1Q15788 1441 aa29.23■■■□□ 2.27
CACNA1A-207ENST00000586190 PTPRKQ15262 1439 aa29.22■■■□□ 2.27
CACNA1A-207ENST00000586190 ZNF142P52746 1687 aaPredicted RBP29.19■■■□□ 2.26
CACNA1A-207ENST00000586190 FAM135AQ9P2D6 1515 aa29.18■■■□□ 2.26
CACNA1A-207ENST00000586190 MYO3AQ8NEV4 1616 aa29.17■■■□□ 2.26
CACNA1A-207ENST00000586190 CAMSAP1Q5T5Y3 1602 aa29.16■■■□□ 2.26
CACNA1A-207ENST00000586190 TSPY4P0CV99 314 aa29.13■■■□□ 2.25
CACNA1A-207ENST00000586190 TSPY10P0CW01 314 aa29.13■■■□□ 2.25
CACNA1A-207ENST00000586190 CEP170BQ9Y4F5 1589 aaPredicted RBP29.12■■■□□ 2.25
CACNA1A-207ENST00000586190 PLA2R1Q13018 1463 aa29.11■■■□□ 2.25
CACNA1A-207ENST00000586190 KIF3BO15066 747 aa29.11■■■□□ 2.25
CACNA1A-207ENST00000586190 MIA2Q96PC5 1412 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms