RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
ATG4D-202ENST00000585437 ADGRL1O94910 1474 aa13.92□□□□□ -0.18
ATG4D-202ENST00000585437 KDM5CP41229 1560 aa13.92□□□□□ -0.18
ATG4D-202ENST00000585437 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
ATG4D-202ENST00000585437 ABCC1P33527 1531 aa13.91□□□□□ -0.18
ATG4D-202ENST00000585437 POGZQ7Z3K3 1410 aa13.9□□□□□ -0.18
ATG4D-202ENST00000585437 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
ATG4D-202ENST00000585437 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
ATG4D-202ENST00000585437 SAMD9LQ8IVG5 1584 aa13.89□□□□□ -0.19
ATG4D-202ENST00000585437 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
ATG4D-202ENST00000585437 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 BCORL1Q5H9F3 1711 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 ZFYVE16Q7Z3T8 1539 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
ATG4D-202ENST00000585437 RAPGEF3O95398 923 aa13.86□□□□□ -0.19
ATG4D-202ENST00000585437 ZNF518AQ6AHZ1 1483 aa13.86□□□□□ -0.19
ATG4D-202ENST00000585437 GPATCH8Q9UKJ3 1502 aaKnown RBP13.85□□□□□ -0.19
ATG4D-202ENST00000585437 SCAPERQ9BY12 1400 aa13.85□□□□□ -0.19
ATG4D-202ENST00000585437 KDM4FA0A1W2PPD8 638 aa13.85□□□□□ -0.19
ATG4D-202ENST00000585437 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
ATG4D-202ENST00000585437 ABCA6Q8N139 1617 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 REREQ9P2R6 1566 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.2
ATG4D-202ENST00000585437 YEATS2Q9ULM3 1422 aa13.81□□□□□ -0.2
ATG4D-202ENST00000585437 SYCP2Q9BX26 1530 aa13.81□□□□□ -0.2
ATG4D-202ENST00000585437 LRRC9Q6ZRR7 1453 aa13.8□□□□□ -0.2
ATG4D-202ENST00000585437 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
ATG4D-202ENST00000585437 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
ATG4D-202ENST00000585437 MADDQ8WXG6 1647 aa13.79□□□□□ -0.2
ATG4D-202ENST00000585437 MLH3Q9UHC1 1453 aa13.79□□□□□ -0.2
ATG4D-202ENST00000585437 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.21
ATG4D-202ENST00000585437 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.21
ATG4D-202ENST00000585437 TRAPPC8Q9Y2L5 1435 aa13.77□□□□□ -0.21
ATG4D-202ENST00000585437 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
ATG4D-202ENST00000585437 CCNB3Q8WWL7 1395 aa13.76□□□□□ -0.21
ATG4D-202ENST00000585437 AEBP2Q6ZN18 517 aaPredicted RBP13.76□□□□□ -0.21
ATG4D-202ENST00000585437 RIMS1Q86UR5 1692 aaKnown RBP13.75□□□□□ -0.21
ATG4D-202ENST00000585437 C9orf84Q5VXU9 1444 aa13.75□□□□□ -0.21
ATG4D-202ENST00000585437 ATP10AO60312 1499 aa13.74□□□□□ -0.21
ATG4D-202ENST00000585437 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
ATG4D-202ENST00000585437 ADGBQ8N7X0 1667 aa13.73□□□□□ -0.21
ATG4D-202ENST00000585437 PLXNC1O60486 1568 aa13.73□□□□□ -0.21
ATG4D-202ENST00000585437 MBD5Q9P267 1494 aa13.73□□□□□ -0.21
ATG4D-202ENST00000585437 ARHGEF5Q12774 1597 aa13.72□□□□□ -0.21
ATG4D-202ENST00000585437 AGLP35573 1532 aa13.72□□□□□ -0.21
ATG4D-202ENST00000585437 CAMSAP2Q08AD1 1489 aa13.72□□□□□ -0.21
ATG4D-202ENST00000585437 AFAP1Q8N556 730 aa13.7□□□□□ -0.22
ATG4D-202ENST00000585437 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
ATG4D-202ENST00000585437 PTPRMP28827 1452 aa13.69□□□□□ -0.22
ATG4D-202ENST00000585437 CFDP1Q9UEE9 299 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-202ENST00000585437 MAST1Q9Y2H9 1570 aa13.67□□□□□ -0.22
ATG4D-202ENST00000585437 MYOM3Q5VTT5 1437 aa13.67□□□□□ -0.22
ATG4D-202ENST00000585437 KANK4Q5T7N3 995 aaPredicted RBP13.67□□□□□ -0.22
ATG4D-202ENST00000585437 CCDC141Q6ZP82 1450 aa13.67□□□□□ -0.22
ATG4D-202ENST00000585437 MROH2AA6NES4 1674 aa13.66□□□□□ -0.22
ATG4D-202ENST00000585437 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
ATG4D-202ENST00000585437 RTEL1-TNFRSF6BF6WH68 1400 aa13.64□□□□□ -0.23
ATG4D-202ENST00000585437 ZNF777Q9ULD5 760 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-202ENST00000585437 PTPN23Q9H3S7 1636 aa13.64□□□□□ -0.23
ATG4D-202ENST00000585437 ZNF644Q9H582 1327 aaPredicted RBP13.64□□□□□ -0.23
ATG4D-202ENST00000585437 C3P01024 1663 aa13.63□□□□□ -0.23
ATG4D-202ENST00000585437 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
ATG4D-202ENST00000585437 ARID4BQ4LE39 1312 aaPredicted RBP13.62□□□□□ -0.23
ATG4D-202ENST00000585437 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
ATG4D-202ENST00000585437 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
ATG4D-202ENST00000585437 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
ATG4D-202ENST00000585437 A2MP01023 1474 aa13.61□□□□□ -0.23
ATG4D-202ENST00000585437 TCOF1Q13428 1488 aaKnown RBP13.61□□□□□ -0.23
ATG4D-202ENST00000585437 EIF2AK4Q9P2K8 1649 aaKnown RBP13.59□□□□□ -0.23
ATG4D-202ENST00000585437 FGD6Q6ZV73 1430 aa13.58□□□□□ -0.24
ATG4D-202ENST00000585437 SHANK2Q9UPX8 1470 aa13.58□□□□□ -0.24
ATG4D-202ENST00000585437 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
ATG4D-202ENST00000585437 RNF17Q9BXT8 1623 aaKnown RBP13.57□□□□□ -0.24
ATG4D-202ENST00000585437 FAM135AQ9P2D6 1515 aa13.57□□□□□ -0.24
ATG4D-202ENST00000585437 LMTK3Q96Q04 1460 aa13.56□□□□□ -0.24
ATG4D-202ENST00000585437 APLP2Q06481 763 aa13.55□□□□□ -0.24
ATG4D-202ENST00000585437 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
ATG4D-202ENST00000585437 MYT1LQ9UL68 1186 aa13.54□□□□□ -0.24
ATG4D-202ENST00000585437 CNTLNQ9NXG0 1405 aa13.54□□□□□ -0.24
ATG4D-202ENST00000585437 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
ATG4D-202ENST00000585437 SETD1BQ9UPS6 1966 aaKnown RBP13.53□□□□□ -0.24
ATG4D-202ENST00000585437 MROH1Q8NDA8 1641 aa13.53□□□□□ -0.24
ATG4D-202ENST00000585437 DHX29Q7Z478 1369 aaKnown RBP13.52□□□□□ -0.25
ATG4D-202ENST00000585437 ZNF142P52746 1687 aaPredicted RBP13.51□□□□□ -0.25
ATG4D-202ENST00000585437 DEPDC5O75140 1603 aa13.51□□□□□ -0.25
ATG4D-202ENST00000585437 ABCC5O15440 1437 aa13.51□□□□□ -0.25
ATG4D-202ENST00000585437 DAPK1P53355 1430 aa13.51□□□□□ -0.25
ATG4D-202ENST00000585437 MLECQ14165 292 aa13.51□□□□□ -0.25
ATG4D-202ENST00000585437 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
ATG4D-202ENST00000585437 DUOX2Q9NRD8 1548 aa13.49□□□□□ -0.25
ATG4D-202ENST00000585437 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
ATG4D-202ENST00000585437 PRDM15P57071 1507 aaPredicted RBP13.48□□□□□ -0.25
ATG4D-202ENST00000585437 ADGRL2O95490 1459 aa13.48□□□□□ -0.25
ATG4D-202ENST00000585437 CEP152O94986 1710 aa13.47□□□□□ -0.25
ATG4D-202ENST00000585437 NPATQ14207 1427 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 360.8 ms