RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 POGZQ7Z3K3 1410 aa26.88■■□□□ 1.89
LSM12-202ENST00000585388 TROQ12816 1431 aaPredicted RBP26.87■■□□□ 1.89
LSM12-202ENST00000585388 SCAPERQ9BY12 1400 aa26.85■■□□□ 1.89
LSM12-202ENST00000585388 RIMS1Q86UR5 1692 aaKnown RBP26.83■■□□□ 1.89
LSM12-202ENST00000585388 PCF11O94913 1555 aaKnown RBP26.83■■□□□ 1.89
LSM12-202ENST00000585388 YEATS2Q9ULM3 1422 aa26.82■■□□□ 1.88
LSM12-202ENST00000585388 CCDC18Q5T9S5 1454 aa26.82■■□□□ 1.88
LSM12-202ENST00000585388 EFCAB2Q5VUJ9 269 aa26.81■■□□□ 1.88
LSM12-202ENST00000585388 ARHGAP5Q13017 1502 aa26.8■■□□□ 1.88
LSM12-202ENST00000585388 CASKIN1Q8WXD9 1431 aa26.79■■□□□ 1.88
LSM12-202ENST00000585388 SIGLEC1Q9BZZ2 1709 aa26.78■■□□□ 1.88
LSM12-202ENST00000585388 ZNF518AQ6AHZ1 1483 aa26.75■■□□□ 1.87
LSM12-202ENST00000585388 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
LSM12-202ENST00000585388 PREX2Q70Z35 1606 aa26.73■■□□□ 1.87
LSM12-202ENST00000585388 KDM5CP41229 1560 aa26.72■■□□□ 1.87
LSM12-202ENST00000585388 FER1L4A9Z1Z3 1794 aa26.72■■□□□ 1.87
LSM12-202ENST00000585388 CDC42BPBQ9Y5S2 1711 aa26.72■■□□□ 1.87
LSM12-202ENST00000585388 ATP10AO60312 1499 aa26.71■■□□□ 1.87
LSM12-202ENST00000585388 ILDR1Q86SU0 546 aaPredicted RBP26.71■■□□□ 1.87
LSM12-202ENST00000585388 C9orf84Q5VXU9 1444 aa26.71■■□□□ 1.87
LSM12-202ENST00000585388 LMTK3Q96Q04 1460 aa26.68■■□□□ 1.86
LSM12-202ENST00000585388 ABCC1P33527 1531 aa26.64■■□□□ 1.85
LSM12-202ENST00000585388 ARHGEF12Q9NZN5 1544 aa26.64■■□□□ 1.85
LSM12-202ENST00000585388 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
LSM12-202ENST00000585388 ITSN2Q9NZM3 1697 aa26.62■■□□□ 1.85
LSM12-202ENST00000585388 MLECQ14165 292 aa26.61■■□□□ 1.85
LSM12-202ENST00000585388 DIP2CQ9Y2E4 1556 aa26.61■■□□□ 1.85
LSM12-202ENST00000585388 REREQ9P2R6 1566 aa26.6■■□□□ 1.85
LSM12-202ENST00000585388 MLH3Q9UHC1 1453 aa26.58■■□□□ 1.85
LSM12-202ENST00000585388 AFAP1Q8N556 730 aa26.58■■□□□ 1.85
LSM12-202ENST00000585388 ABCA6Q8N139 1617 aa26.57■■□□□ 1.84
LSM12-202ENST00000585388 MYT1LQ9UL68 1186 aa26.56■■□□□ 1.84
LSM12-202ENST00000585388 PLPPR3Q6T4P5 718 aa26.54■■□□□ 1.84
LSM12-202ENST00000585388 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
LSM12-202ENST00000585388 PREX1Q8TCU6 1659 aa26.5■■□□□ 1.83
LSM12-202ENST00000585388 SAMD9LQ8IVG5 1584 aa26.49■■□□□ 1.83
LSM12-202ENST00000585388 KIDINS220Q9ULH0 1771 aa26.48■■□□□ 1.83
LSM12-202ENST00000585388 AGLP35573 1532 aa26.48■■□□□ 1.83
LSM12-202ENST00000585388 GPATCH8Q9UKJ3 1502 aaKnown RBP26.46■■□□□ 1.83
LSM12-202ENST00000585388 SYCP2Q9BX26 1530 aa26.45■■□□□ 1.83
LSM12-202ENST00000585388 HSPA2P54652 639 aa26.44■■□□□ 1.82
LSM12-202ENST00000585388 MTUS2Q5JR59 1369 aa26.43■■□□□ 1.82
LSM12-202ENST00000585388 PLEKHH2Q8IVE3 1493 aa26.42■■□□□ 1.82
LSM12-202ENST00000585388 ZNF777Q9ULD5 760 aaPredicted RBP26.41■■□□□ 1.82
LSM12-202ENST00000585388 FBXO41Q8TF61 875 aa26.4■■□□□ 1.82
LSM12-202ENST00000585388 CCNB3Q8WWL7 1395 aa26.4■■□□□ 1.82
LSM12-202ENST00000585388 EHBP1L1Q8N3D4 1523 aa26.39■■□□□ 1.82
LSM12-202ENST00000585388 C3P01024 1663 aa26.38■■□□□ 1.81
LSM12-202ENST00000585388 CEP162Q5TB80 1403 aa26.38■■□□□ 1.81
LSM12-202ENST00000585388 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
LSM12-202ENST00000585388 CEBPAP49715 358 aaPredicted RBP26.36■■□□□ 1.81
LSM12-202ENST00000585388 UHRF1BP1Q6BDS2 1440 aa26.36■■□□□ 1.81
LSM12-202ENST00000585388 ATP7AQ04656 1500 aa26.35■■□□□ 1.81
LSM12-202ENST00000585388 SETD1BQ9UPS6 1966 aaKnown RBP26.35■■□□□ 1.81
LSM12-202ENST00000585388 ESF1Q9H501 851 aaKnown RBP26.35■■□□□ 1.81
LSM12-202ENST00000585388 CFDP1Q9UEE9 299 aaPredicted RBP26.35■■□□□ 1.81
LSM12-202ENST00000585388 INO80Q9ULG1 1556 aaPredicted RBP26.35■■□□□ 1.81
LSM12-202ENST00000585388 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
LSM12-202ENST00000585388 TIAM1Q13009 1591 aa26.34■■□□□ 1.81
LSM12-202ENST00000585388 CNTLNQ9NXG0 1405 aa26.34■■□□□ 1.81
LSM12-202ENST00000585388 HNRNPMP52272 730 aaKnown RBP eCLIP26.31■■□□□ 1.8
LSM12-202ENST00000585388 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
LSM12-202ENST00000585388 SUPT6HQ7KZ85 1726 aaKnown RBP26.29■■□□□ 1.8
LSM12-202ENST00000585388 PLXNC1O60486 1568 aa26.29■■□□□ 1.8
LSM12-202ENST00000585388 ADGBQ8N7X0 1667 aa26.25■■□□□ 1.79
LSM12-202ENST00000585388 A2MP01023 1474 aa26.24■■□□□ 1.79
LSM12-202ENST00000585388 STRCQ7RTU9 1775 aa26.24■■□□□ 1.79
LSM12-202ENST00000585388 DMRT2Q9Y5R5 561 aa26.2■■□□□ 1.78
LSM12-202ENST00000585388 NPATQ14207 1427 aa26.19■■□□□ 1.78
LSM12-202ENST00000585388 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
LSM12-202ENST00000585388 MBD5Q9P267 1494 aa26.18■■□□□ 1.78
LSM12-202ENST00000585388 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
LSM12-202ENST00000585388 ZNF644Q9H582 1327 aaPredicted RBP26.15■■□□□ 1.78
LSM12-202ENST00000585388 RTEL1-TNFRSF6BF6WH68 1400 aa26.15■■□□□ 1.78
LSM12-202ENST00000585388 CERKQ8TCT0 537 aa26.14■■□□□ 1.78
LSM12-202ENST00000585388 CAMSAP2Q08AD1 1489 aa26.13■■□□□ 1.77
LSM12-202ENST00000585388 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
LSM12-202ENST00000585388 CCDC141Q6ZP82 1450 aa26.12■■□□□ 1.77
LSM12-202ENST00000585388 VPS8Q8N3P4 1428 aa26.12■■□□□ 1.77
LSM12-202ENST00000585388 PTPRTO14522 1441 aa26.11■■□□□ 1.77
LSM12-202ENST00000585388 MYO3AQ8NEV4 1616 aa26.09■■□□□ 1.77
LSM12-202ENST00000585388 ZNF142P52746 1687 aaPredicted RBP26.09■■□□□ 1.77
LSM12-202ENST00000585388 NCOA1Q15788 1441 aa26.08■■□□□ 1.77
LSM12-202ENST00000585388 GGT6Q6P531 493 aa26.07■■□□□ 1.76
LSM12-202ENST00000585388 PPP6R1Q9UPN7 881 aa26.07■■□□□ 1.76
LSM12-202ENST00000585388 ARHGEF5Q12774 1597 aa26.06■■□□□ 1.76
LSM12-202ENST00000585388 CAMSAP1Q5T5Y3 1602 aa26.05■■□□□ 1.76
LSM12-202ENST00000585388 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
LSM12-202ENST00000585388 RSPH4AQ5TD94 716 aa26.04■■□□□ 1.76
LSM12-202ENST00000585388 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
LSM12-202ENST00000585388 PTPRKQ15262 1439 aa26.04■■□□□ 1.76
LSM12-202ENST00000585388 FAM135AQ9P2D6 1515 aa26.04■■□□□ 1.76
LSM12-202ENST00000585388 CEP170BQ9Y4F5 1589 aaPredicted RBP26.02■■□□□ 1.76
LSM12-202ENST00000585388 MAP3K1Q13233 1512 aa26.01■■□□□ 1.75
LSM12-202ENST00000585388 LOC105371045A0A1W2PR82 267 aa25.98■■□□□ 1.75
LSM12-202ENST00000585388 KDM5DQ9BY66 1539 aa25.98■■□□□ 1.75
LSM12-202ENST00000585388 PLA2R1Q13018 1463 aa25.98■■□□□ 1.75
LSM12-202ENST00000585388 MAST1Q9Y2H9 1570 aa25.94■■□□□ 1.74
LSM12-202ENST00000585388 LTBP4Q8N2S1 1624 aa25.93■■□□□ 1.74
LSM12-202ENST00000585388 KIF3BO15066 747 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms