RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
TRIM47-202ENST00000585333 EFCAB2Q5VUJ9 269 aa19.72■□□□□ 0.75
TRIM47-202ENST00000585333 RRBP1Q9P2E9 1410 aaKnown RBP19.72■□□□□ 0.75
TRIM47-202ENST00000585333 ARHGAP5Q13017 1502 aa19.71■□□□□ 0.75
TRIM47-202ENST00000585333 TEX14Q8IWB6 1497 aa19.71■□□□□ 0.75
TRIM47-202ENST00000585333 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
TRIM47-202ENST00000585333 MAP3K4Q9Y6R4 1608 aa19.7■□□□□ 0.74
TRIM47-202ENST00000585333 TRIM26Q12899 539 aaPredicted RBP19.67■□□□□ 0.74
TRIM47-202ENST00000585333 TCOF1Q13428 1488 aaKnown RBP19.67■□□□□ 0.74
TRIM47-202ENST00000585333 NEO1Q92859 1461 aa19.67■□□□□ 0.74
TRIM47-202ENST00000585333 RSPH4AQ5TD94 716 aa19.66■□□□□ 0.74
TRIM47-202ENST00000585333 FANCAO15360 1455 aa19.66■□□□□ 0.74
TRIM47-202ENST00000585333 PTPN23Q9H3S7 1636 aa19.65■□□□□ 0.74
TRIM47-202ENST00000585333 KIAA1107Q9UPP5 1409 aa19.64■□□□□ 0.73
TRIM47-202ENST00000585333 CDC42BPBQ9Y5S2 1711 aa19.64■□□□□ 0.73
TRIM47-202ENST00000585333 KIF13AQ9H1H9 1805 aa19.63■□□□□ 0.73
TRIM47-202ENST00000585333 CAMSAP2Q08AD1 1489 aa19.62■□□□□ 0.73
TRIM47-202ENST00000585333 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
TRIM47-202ENST00000585333 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
TRIM47-202ENST00000585333 AKNAQ7Z591 1439 aa19.58■□□□□ 0.72
TRIM47-202ENST00000585333 ADGRL1O94910 1474 aa19.57■□□□□ 0.72
TRIM47-202ENST00000585333 ARHGEF5Q12774 1597 aa19.57■□□□□ 0.72
TRIM47-202ENST00000585333 SAMD9LQ8IVG5 1584 aa19.57■□□□□ 0.72
TRIM47-202ENST00000585333 ABCC1P33527 1531 aa19.56■□□□□ 0.72
TRIM47-202ENST00000585333 CCDC141Q6ZP82 1450 aa19.54■□□□□ 0.72
TRIM47-202ENST00000585333 TSPY4P0CV99 314 aa19.53■□□□□ 0.72
TRIM47-202ENST00000585333 TSPY10P0CW01 314 aa19.53■□□□□ 0.72
TRIM47-202ENST00000585333 DNMT1P26358 1616 aaKnown RBP19.52■□□□□ 0.72
TRIM47-202ENST00000585333 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.72
TRIM47-202ENST00000585333 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
TRIM47-202ENST00000585333 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
TRIM47-202ENST00000585333 ZNF518AQ6AHZ1 1483 aa19.51■□□□□ 0.71
TRIM47-202ENST00000585333 TSPOAP1O95153 1857 aa19.5■□□□□ 0.71
TRIM47-202ENST00000585333 DENND4BO75064 1496 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-202ENST00000585333 DAPK1P53355 1430 aa19.5■□□□□ 0.71
TRIM47-202ENST00000585333 ZNF644Q9H582 1327 aaPredicted RBP19.5■□□□□ 0.71
TRIM47-202ENST00000585333 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
TRIM47-202ENST00000585333 MBD5Q9P267 1494 aa19.49■□□□□ 0.71
TRIM47-202ENST00000585333 POGZQ7Z3K3 1410 aa19.47■□□□□ 0.71
TRIM47-202ENST00000585333 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.71
TRIM47-202ENST00000585333 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
TRIM47-202ENST00000585333 ROCK1Q13464 1354 aa19.45■□□□□ 0.7
TRIM47-202ENST00000585333 RTEL1-TNFRSF6BF6WH68 1400 aa19.45■□□□□ 0.7
TRIM47-202ENST00000585333 ABCC5O15440 1437 aa19.45■□□□□ 0.7
TRIM47-202ENST00000585333 CROCC2H7BZ55 1655 aa19.45■□□□□ 0.7
TRIM47-202ENST00000585333 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
TRIM47-202ENST00000585333 ANKRD30AQ9BXX3 1397 aa19.44■□□□□ 0.7
TRIM47-202ENST00000585333 C9orf84Q5VXU9 1444 aa19.43■□□□□ 0.7
TRIM47-202ENST00000585333 SPAG9O60271 1321 aaKnown RBP19.43■□□□□ 0.7
TRIM47-202ENST00000585333 ADGRL2O95490 1459 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 MAGI2Q86UL8 1455 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 KDM5CP41229 1560 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 ITGAEP38570 1179 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
TRIM47-202ENST00000585333 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
TRIM47-202ENST00000585333 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
TRIM47-202ENST00000585333 MLH3Q9UHC1 1453 aa19.39■□□□□ 0.69
TRIM47-202ENST00000585333 ZMYM4Q5VZL5 1548 aa19.38■□□□□ 0.69
TRIM47-202ENST00000585333 RICTORQ6R327 1708 aa19.37■□□□□ 0.69
TRIM47-202ENST00000585333 HECW2Q9P2P5 1572 aa19.37■□□□□ 0.69
TRIM47-202ENST00000585333 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
TRIM47-202ENST00000585333 MYT1LQ9UL68 1186 aa19.37■□□□□ 0.69
TRIM47-202ENST00000585333 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
TRIM47-202ENST00000585333 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
TRIM47-202ENST00000585333 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
TRIM47-202ENST00000585333 HFM1A2PYH4 1435 aa19.35■□□□□ 0.69
TRIM47-202ENST00000585333 KDM6BO15054 1643 aa19.35■□□□□ 0.69
TRIM47-202ENST00000585333 INO80Q9ULG1 1556 aaPredicted RBP19.35■□□□□ 0.69
TRIM47-202ENST00000585333 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
TRIM47-202ENST00000585333 NCOA1Q15788 1441 aa19.34■□□□□ 0.69
TRIM47-202ENST00000585333 RAPGEF3O95398 923 aa19.32■□□□□ 0.68
TRIM47-202ENST00000585333 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
TRIM47-202ENST00000585333 PTPRKQ15262 1439 aa19.32■□□□□ 0.68
TRIM47-202ENST00000585333 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
TRIM47-202ENST00000585333 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
TRIM47-202ENST00000585333 DUOX2Q9NRD8 1548 aa19.3■□□□□ 0.68
TRIM47-202ENST00000585333 HRCP23327 699 aa19.3■□□□□ 0.68
TRIM47-202ENST00000585333 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
TRIM47-202ENST00000585333 GCC2Q8IWJ2 1684 aa19.29■□□□□ 0.68
TRIM47-202ENST00000585333 ERBINQ96RT1 1412 aa19.28■□□□□ 0.68
TRIM47-202ENST00000585333 NAIPQ13075 1403 aa19.27■□□□□ 0.68
TRIM47-202ENST00000585333 KIDINS220Q9ULH0 1771 aa19.27■□□□□ 0.67
TRIM47-202ENST00000585333 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
TRIM47-202ENST00000585333 ANKRD50Q9ULJ7 1429 aa19.25■□□□□ 0.67
TRIM47-202ENST00000585333 COL17A1Q9UMD9 1497 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-202ENST00000585333 ARHGEF40Q8TER5 1519 aa19.24■□□□□ 0.67
TRIM47-202ENST00000585333 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
TRIM47-202ENST00000585333 ATP10AO60312 1499 aa19.23■□□□□ 0.67
TRIM47-202ENST00000585333 A2MP01023 1474 aa19.23■□□□□ 0.67
TRIM47-202ENST00000585333 DHX29Q7Z478 1369 aaKnown RBP19.23■□□□□ 0.67
TRIM47-202ENST00000585333 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
TRIM47-202ENST00000585333 DIP2CQ9Y2E4 1556 aa19.21■□□□□ 0.67
TRIM47-202ENST00000585333 ABCA6Q8N139 1617 aa19.2■□□□□ 0.66
TRIM47-202ENST00000585333 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
TRIM47-202ENST00000585333 YEATS2Q9ULM3 1422 aa19.17■□□□□ 0.66
TRIM47-202ENST00000585333 AGLP35573 1532 aa19.16■□□□□ 0.66
TRIM47-202ENST00000585333 BCORL1Q5H9F3 1711 aa19.15■□□□□ 0.66
TRIM47-202ENST00000585333 KANK1Q14678 1352 aa19.15■□□□□ 0.66
TRIM47-202ENST00000585333 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms