RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 BOLA1Q9Y3E2 137 aa9.56□□□□□ -0.88
PPP4R1-229ENST00000584754 MMRN1Q13201 1228 aa9.55□□□□□ -0.88
PPP4R1-229ENST00000584754 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
PPP4R1-229ENST00000584754 FAM205CA6NFA0 338 aa9.5□□□□□ -0.89
PPP4R1-229ENST00000584754 DNAJC5Q9H3Z4 198 aa9.49□□□□□ -0.89
PPP4R1-229ENST00000584754 GTPBP6O43824 516 aaPredicted RBP9.48□□□□□ -0.89
PPP4R1-229ENST00000584754 HS3ST6Q96QI5 342 aa9.47□□□□□ -0.89
PPP4R1-229ENST00000584754 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
PPP4R1-229ENST00000584754 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
PPP4R1-229ENST00000584754 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
PPP4R1-229ENST00000584754 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
PPP4R1-229ENST00000584754 POTEBQ6S5H4 581 aa9.41□□□□□ -0.9
PPP4R1-229ENST00000584754 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
PPP4R1-229ENST00000584754 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
PPP4R1-229ENST00000584754 KRTAP3-2Q9BYR7 98 aa9.39□□□□□ -0.91
PPP4R1-229ENST00000584754 DOK7Q18PE1 504 aa9.38□□□□□ -0.91
PPP4R1-229ENST00000584754 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
PPP4R1-229ENST00000584754 ERBB3P21860 1342 aa9.37□□□□□ -0.91
PPP4R1-229ENST00000584754 HOXB3P14651 431 aaPredicted RBP9.37□□□□□ -0.91
PPP4R1-229ENST00000584754 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-229ENST00000584754 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
PPP4R1-229ENST00000584754 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
PPP4R1-229ENST00000584754 SPRYD3Q8NCJ5 442 aa9.35□□□□□ -0.91
PPP4R1-229ENST00000584754 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
PPP4R1-229ENST00000584754 RYDENQ9NUL5 291 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-229ENST00000584754 CADPS2Q86UW7 1296 aa9.33□□□□□ -0.92
PPP4R1-229ENST00000584754 KIF3CO14782 793 aa9.31□□□□□ -0.92
PPP4R1-229ENST00000584754 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
PPP4R1-229ENST00000584754 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-229ENST00000584754 NCKAP5LQ9HCH0 1330 aa9.27□□□□□ -0.93
PPP4R1-229ENST00000584754 DSG2Q14126 1118 aa9.25□□□□□ -0.93
PPP4R1-229ENST00000584754 GPHNQ9NQX3 736 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-229ENST00000584754 LARP6Q9BRS8 491 aaKnown RBP9.23□□□□□ -0.93
PPP4R1-229ENST00000584754 CRISPLD2Q9H0B8 497 aa9.23□□□□□ -0.93
PPP4R1-229ENST00000584754 PLPP6Q8IY26 295 aa9.22□□□□□ -0.93
PPP4R1-229ENST00000584754 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.938e-7■■■□□ 17.7
PPP4R1-229ENST00000584754 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-229ENST00000584754 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
PPP4R1-229ENST00000584754 TSHZ2Q9NRE2 1034 aa9.22□□□□□ -0.93
PPP4R1-229ENST00000584754 PDE4AP27815 886 aa9.2□□□□□ -0.94
PPP4R1-229ENST00000584754 ARSIQ5FYB1 569 aa9.2□□□□□ -0.94
PPP4R1-229ENST00000584754 FOXK1P85037 733 aa9.19□□□□□ -0.94
PPP4R1-229ENST00000584754 MYT1LQ9UL68 1186 aa9.19□□□□□ -0.94
PPP4R1-229ENST00000584754 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
PPP4R1-229ENST00000584754 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
PPP4R1-229ENST00000584754 ZNF687Q8N1G0 1237 aa9.17□□□□□ -0.94
PPP4R1-229ENST00000584754 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
PPP4R1-229ENST00000584754 ANKRD13DQ6ZTN6 518 aa9.15□□□□□ -0.94
PPP4R1-229ENST00000584754 UPF1Q92900 1129 aaKnown RBP eCLIP9.15□□□□□ -0.94
PPP4R1-229ENST00000584754 DDX27Q96GQ7 796 aaKnown RBP9.15□□□□□ -0.94
PPP4R1-229ENST00000584754 PCDHGA4Q9Y5G9 962 aa9.13□□□□□ -0.95
PPP4R1-229ENST00000584754 NUDT7P0C024 238 aa9.12□□□□□ -0.95
PPP4R1-229ENST00000584754 MFSD10Q14728 455 aa9.11□□□□□ -0.95
PPP4R1-229ENST00000584754 SLC34A2O95436 690 aa9.1□□□□□ -0.95
PPP4R1-229ENST00000584754 ZNF316A6NFI3 1004 aaPredicted RBP9.09□□□□□ -0.95
PPP4R1-229ENST00000584754 PTGER2P43116 358 aa9.09□□□□□ -0.95
PPP4R1-229ENST00000584754 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
PPP4R1-229ENST00000584754 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
PPP4R1-229ENST00000584754 PTCD2Q8WV60 388 aaKnown RBP9.08□□□□□ -0.96
PPP4R1-229ENST00000584754 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
PPP4R1-229ENST00000584754 LHX6Q9UPM6 363 aa9.05□□□□□ -0.96
PPP4R1-229ENST00000584754 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
PPP4R1-229ENST00000584754 WDR70Q9NW82 654 aa9.03□□□□□ -0.96
PPP4R1-229ENST00000584754 KDM4FA0A1W2PPD8 638 aa9.02□□□□□ -0.97
PPP4R1-229ENST00000584754 TBC1D12O60347 775 aa9.02□□□□□ -0.97
PPP4R1-229ENST00000584754 MAP3K9P80192 1104 aa9.02□□□□□ -0.97
PPP4R1-229ENST00000584754 DPYSL4O14531 572 aa9.01□□□□□ -0.97
PPP4R1-229ENST00000584754 CAMK2BQ13554 666 aa9□□□□□ -0.97
PPP4R1-229ENST00000584754 E2F4Q16254 413 aa8.99□□□□□ -0.97
PPP4R1-229ENST00000584754 EVI5O60447 810 aa8.98□□□□□ -0.97
PPP4R1-229ENST00000584754 PBX2P40425 430 aa8.98□□□□□ -0.97
PPP4R1-229ENST00000584754 KDM2AQ9Y2K7 1162 aa8.98□□□□□ -0.97
PPP4R1-229ENST00000584754 AXIN2Q9Y2T1 843 aa8.98□□□□□ -0.97
PPP4R1-229ENST00000584754 SLC24A1O60721 1099 aa8.94□□□□□ -0.98
PPP4R1-229ENST00000584754 POTEEQ6S8J3 1075 aa8.92□□□□□ -0.98
PPP4R1-229ENST00000584754 ZNF454Q8N9F8 522 aa8.92□□□□□ -0.98
PPP4R1-229ENST00000584754 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
PPP4R1-229ENST00000584754 KCNV2Q8TDN2 545 aa8.91□□□□□ -0.98
PPP4R1-229ENST00000584754 DDX12PQ92771 950 aa8.9□□□□□ -0.98
PPP4R1-229ENST00000584754 PLA2G2EQ9NZK7 142 aa8.9□□□□□ -0.98
PPP4R1-229ENST00000584754 HCSTQ9UBK5 93 aa8.89□□□□□ -0.99
PPP4R1-229ENST00000584754 PSDA5PKW4 1024 aaPredicted RBP8.88□□□□□ -0.99
PPP4R1-229ENST00000584754 ARHGAP33O14559 1287 aa8.88□□□□□ -0.99
PPP4R1-229ENST00000584754 PSEN2P49810 448 aa8.88□□□□□ -0.99
PPP4R1-229ENST00000584754 FOSBP53539 338 aa8.88□□□□□ -0.99
PPP4R1-229ENST00000584754 ADGRD1Q6QNK2 874 aa8.88□□□□□ -0.99
PPP4R1-229ENST00000584754 PPP4R3BQ5MIZ7 849 aa8.87□□□□□ -0.99
PPP4R1-229ENST00000584754 STAC3Q96MF2 364 aa8.86□□□□□ -0.99
PPP4R1-229ENST00000584754 PCDHGA10Q9Y5H3 936 aa8.86□□□□□ -0.99
PPP4R1-229ENST00000584754 PDIA6Q15084 440 aa8.85□□□□□ -0.99
PPP4R1-229ENST00000584754 ADAM33Q9BZ11 813 aa8.85□□□□□ -0.99
PPP4R1-229ENST00000584754 GRXCR2A6NFK2 248 aa8.84□□□□□ -0.99
PPP4R1-229ENST00000584754 DMRTA1Q5VZB9 504 aa8.84□□□□□ -0.99
PPP4R1-229ENST00000584754 RBM33Q96EV2 1170 aaKnown RBP8.84□□□□□ -0.99
PPP4R1-229ENST00000584754 JPH4Q96JJ6 628 aa8.84□□□□□ -0.99
PPP4R1-229ENST00000584754 KCNK17Q96T54 332 aa8.84□□□□□ -0.99
PPP4R1-229ENST00000584754 ZDHHC16Q969W1 377 aa8.83□□□□□ -1
PPP4R1-229ENST00000584754 ARIH1Q9Y4X5 557 aaPredicted RBP8.83□□□□□ -1
PPP4R1-229ENST00000584754 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
PPP4R1-229ENST00000584754 SPDYE16A6NNV3 312 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms