RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 MAGI2Q86UL8 1455 aa21.22■□□□□ 0.99
ERBB2-220ENST00000584684 CDC42BPBQ9Y5S2 1711 aa21.22■□□□□ 0.99
ERBB2-220ENST00000584684 ARHGAP5Q13017 1502 aa21.22■□□□□ 0.99
ERBB2-220ENST00000584684 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
ERBB2-220ENST00000584684 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
ERBB2-220ENST00000584684 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
ERBB2-220ENST00000584684 ZFYVE16Q7Z3T8 1539 aa21.19■□□□□ 0.98
ERBB2-220ENST00000584684 KDM5CP41229 1560 aa21.17■□□□□ 0.98
ERBB2-220ENST00000584684 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
ERBB2-220ENST00000584684 ZNF518AQ6AHZ1 1483 aa21.16■□□□□ 0.98
ERBB2-220ENST00000584684 ABCC1P33527 1531 aa21.15■□□□□ 0.98
ERBB2-220ENST00000584684 BCORL1Q5H9F3 1711 aa21.15■□□□□ 0.98
ERBB2-220ENST00000584684 EHBP1L1Q8N3D4 1523 aa21.14■□□□□ 0.97
ERBB2-220ENST00000584684 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
ERBB2-220ENST00000584684 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
ERBB2-220ENST00000584684 HECW2Q9P2P5 1572 aa21.1■□□□□ 0.97
ERBB2-220ENST00000584684 MTUS2Q5JR59 1369 aa21.1■□□□□ 0.97
ERBB2-220ENST00000584684 GPATCH8Q9UKJ3 1502 aaKnown RBP21.09■□□□□ 0.97
ERBB2-220ENST00000584684 SIGLEC1Q9BZZ2 1709 aa21.09■□□□□ 0.97
ERBB2-220ENST00000584684 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.97
ERBB2-220ENST00000584684 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
ERBB2-220ENST00000584684 ARHGEF12Q9NZN5 1544 aa21.06■□□□□ 0.96
ERBB2-220ENST00000584684 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
ERBB2-220ENST00000584684 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
ERBB2-220ENST00000584684 MADDQ8WXG6 1647 aa21.05■□□□□ 0.96
ERBB2-220ENST00000584684 ATP10AO60312 1499 aa21.05■□□□□ 0.96
ERBB2-220ENST00000584684 MLH3Q9UHC1 1453 aa21.05■□□□□ 0.96
ERBB2-220ENST00000584684 REREQ9P2R6 1566 aa21.05■□□□□ 0.96
ERBB2-220ENST00000584684 C9orf84Q5VXU9 1444 aa21.04■□□□□ 0.96
ERBB2-220ENST00000584684 DIP2CQ9Y2E4 1556 aa21.02■□□□□ 0.96
ERBB2-220ENST00000584684 PLEKHH2Q8IVE3 1493 aa21.02■□□□□ 0.96
ERBB2-220ENST00000584684 TRAPPC8Q9Y2L5 1435 aa21.02■□□□□ 0.96
ERBB2-220ENST00000584684 PTPRMP28827 1452 aa21.01■□□□□ 0.95
ERBB2-220ENST00000584684 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
ERBB2-220ENST00000584684 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
ERBB2-220ENST00000584684 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
ERBB2-220ENST00000584684 ABCA6Q8N139 1617 aa21■□□□□ 0.95
ERBB2-220ENST00000584684 MAP3K1Q13233 1512 aa21■□□□□ 0.95
ERBB2-220ENST00000584684 KIAA1107Q9UPP5 1409 aa21■□□□□ 0.95
ERBB2-220ENST00000584684 ARID4BQ4LE39 1312 aaPredicted RBP21■□□□□ 0.95
ERBB2-220ENST00000584684 AFAP1Q8N556 730 aa20.99■□□□□ 0.95
ERBB2-220ENST00000584684 KIDINS220Q9ULH0 1771 aa20.98■□□□□ 0.95
ERBB2-220ENST00000584684 RIMS1Q86UR5 1692 aaKnown RBP20.96■□□□□ 0.95
ERBB2-220ENST00000584684 NCOA2Q15596 1464 aa20.95■□□□□ 0.94
ERBB2-220ENST00000584684 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
ERBB2-220ENST00000584684 CFDP1Q9UEE9 299 aaPredicted RBP20.95■□□□□ 0.94
ERBB2-220ENST00000584684 INO80Q9ULG1 1556 aaPredicted RBP20.94■□□□□ 0.94
ERBB2-220ENST00000584684 LRRC9Q6ZRR7 1453 aa20.94■□□□□ 0.94
ERBB2-220ENST00000584684 AGLP35573 1532 aa20.94■□□□□ 0.94
ERBB2-220ENST00000584684 ATP7AQ04656 1500 aa20.9■□□□□ 0.94
ERBB2-220ENST00000584684 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
ERBB2-220ENST00000584684 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
ERBB2-220ENST00000584684 PLXNC1O60486 1568 aa20.86■□□□□ 0.93
ERBB2-220ENST00000584684 SPAG9O60271 1321 aaKnown RBP20.85■□□□□ 0.93
ERBB2-220ENST00000584684 CAMSAP2Q08AD1 1489 aa20.85■□□□□ 0.93
ERBB2-220ENST00000584684 HNRNPMP52272 730 aaKnown RBP eCLIP20.84■□□□□ 0.93
ERBB2-220ENST00000584684 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
ERBB2-220ENST00000584684 ADGBQ8N7X0 1667 aa20.83■□□□□ 0.92
ERBB2-220ENST00000584684 ZNF644Q9H582 1327 aaPredicted RBP20.81■□□□□ 0.92
ERBB2-220ENST00000584684 ARHGEF5Q12774 1597 aa20.81■□□□□ 0.92
ERBB2-220ENST00000584684 RTEL1-TNFRSF6BF6WH68 1400 aa20.81■□□□□ 0.92
ERBB2-220ENST00000584684 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
ERBB2-220ENST00000584684 LMTK3Q96Q04 1460 aa20.81■□□□□ 0.92
ERBB2-220ENST00000584684 MLECQ14165 292 aa20.8■□□□□ 0.92
ERBB2-220ENST00000584684 A2MP01023 1474 aa20.78■□□□□ 0.92
ERBB2-220ENST00000584684 MYOM3Q5VTT5 1437 aa20.77■□□□□ 0.91
ERBB2-220ENST00000584684 MIA2Q96PC5 1412 aa20.77■□□□□ 0.91
ERBB2-220ENST00000584684 KANK4Q5T7N3 995 aaPredicted RBP20.76■□□□□ 0.91
ERBB2-220ENST00000584684 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
ERBB2-220ENST00000584684 CNTLNQ9NXG0 1405 aa20.75■□□□□ 0.91
ERBB2-220ENST00000584684 RSPH4AQ5TD94 716 aa20.74■□□□□ 0.91
ERBB2-220ENST00000584684 C3P01024 1663 aa20.73■□□□□ 0.91
ERBB2-220ENST00000584684 PREX1Q8TCU6 1659 aa20.73■□□□□ 0.91
ERBB2-220ENST00000584684 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
ERBB2-220ENST00000584684 APLP2Q06481 763 aa20.69■□□□□ 0.9
ERBB2-220ENST00000584684 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
ERBB2-220ENST00000584684 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
ERBB2-220ENST00000584684 DHX29Q7Z478 1369 aaKnown RBP20.66■□□□□ 0.9
ERBB2-220ENST00000584684 CROCC2H7BZ55 1655 aa20.64■□□□□ 0.9
ERBB2-220ENST00000584684 ESF1Q9H501 851 aaKnown RBP20.64■□□□□ 0.89
ERBB2-220ENST00000584684 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.89
ERBB2-220ENST00000584684 PTPN23Q9H3S7 1636 aa20.64■□□□□ 0.89
ERBB2-220ENST00000584684 NPATQ14207 1427 aa20.63■□□□□ 0.89
ERBB2-220ENST00000584684 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
ERBB2-220ENST00000584684 SHANK2Q9UPX8 1470 aa20.62■□□□□ 0.89
ERBB2-220ENST00000584684 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
ERBB2-220ENST00000584684 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
ERBB2-220ENST00000584684 FGD6Q6ZV73 1430 aa20.61■□□□□ 0.89
ERBB2-220ENST00000584684 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
ERBB2-220ENST00000584684 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
ERBB2-220ENST00000584684 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
ERBB2-220ENST00000584684 PLPPR3Q6T4P5 718 aa20.6■□□□□ 0.89
ERBB2-220ENST00000584684 EIF2AK4Q9P2K8 1649 aaKnown RBP20.6■□□□□ 0.89
ERBB2-220ENST00000584684 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
ERBB2-220ENST00000584684 RNF17Q9BXT8 1623 aaKnown RBP20.59■□□□□ 0.89
ERBB2-220ENST00000584684 ZMYM3Q14202 1370 aa20.58■□□□□ 0.88
ERBB2-220ENST00000584684 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.88
ERBB2-220ENST00000584684 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
ERBB2-220ENST00000584684 ABCC5O15440 1437 aa20.54■□□□□ 0.88
ERBB2-220ENST00000584684 HSPA2P54652 639 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms