RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 ADAMTSL3P82987 1691 aa33.33■■■□□ 2.93
TOP3A-218ENST00000584669 SCAPERQ9BY12 1400 aa33.3■■■□□ 2.92
TOP3A-218ENST00000584669 BCORL1Q5H9F3 1711 aa33.29■■■□□ 2.92
TOP3A-218ENST00000584669 ZMYM4Q5VZL5 1548 aa33.28■■■□□ 2.92
TOP3A-218ENST00000584669 ZFYVE16Q7Z3T8 1539 aa33.28■■■□□ 2.92
TOP3A-218ENST00000584669 PTPRMP28827 1452 aa33.27■■■□□ 2.92
TOP3A-218ENST00000584669 EFCAB2Q5VUJ9 269 aa33.27■■■□□ 2.92
TOP3A-218ENST00000584669 POGZQ7Z3K3 1410 aa33.26■■■□□ 2.91
TOP3A-218ENST00000584669 YEATS2Q9ULM3 1422 aa33.25■■■□□ 2.91
TOP3A-218ENST00000584669 MADDQ8WXG6 1647 aa33.24■■■□□ 2.91
TOP3A-218ENST00000584669 ARHGAP5Q13017 1502 aa33.22■■■□□ 2.91
TOP3A-218ENST00000584669 MAGI2Q86UL8 1455 aa33.19■■■□□ 2.9
TOP3A-218ENST00000584669 CDC42BPBQ9Y5S2 1711 aa33.17■■■□□ 2.9
TOP3A-218ENST00000584669 RIMS1Q86UR5 1692 aaKnown RBP33.14■■■□□ 2.9
TOP3A-218ENST00000584669 CDC42BPAQ5VT25 1732 aa33.14■■■□□ 2.89
TOP3A-218ENST00000584669 MLECQ14165 292 aa33.12■■■□□ 2.89
TOP3A-218ENST00000584669 PREX2Q70Z35 1606 aa33.11■■■□□ 2.89
TOP3A-218ENST00000584669 PLPPR3Q6T4P5 718 aa33.11■■■□□ 2.89
TOP3A-218ENST00000584669 SIGLEC1Q9BZZ2 1709 aa33.11■■■□□ 2.89
TOP3A-218ENST00000584669 MYT1LQ9UL68 1186 aa33.09■■■□□ 2.89
TOP3A-218ENST00000584669 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
TOP3A-218ENST00000584669 ZNF518AQ6AHZ1 1483 aa33.07■■■□□ 2.88
TOP3A-218ENST00000584669 ATP10AO60312 1499 aa33.05■■■□□ 2.88
TOP3A-218ENST00000584669 AFAP1Q8N556 730 aa33.05■■■□□ 2.88
TOP3A-218ENST00000584669 C9orf84Q5VXU9 1444 aa33.03■■■□□ 2.88
TOP3A-218ENST00000584669 MTUS2Q5JR59 1369 aa33.02■■■□□ 2.88
TOP3A-218ENST00000584669 EHBP1L1Q8N3D4 1523 aa33■■■□□ 2.87
TOP3A-218ENST00000584669 KDM5CP41229 1560 aa32.99■■■□□ 2.87
TOP3A-218ENST00000584669 TIAM1Q13009 1591 aa32.99■■■□□ 2.87
TOP3A-218ENST00000584669 ILDR1Q86SU0 546 aaPredicted RBP32.98■■■□□ 2.87
TOP3A-218ENST00000584669 FER1L4A9Z1Z3 1794 aa32.96■■■□□ 2.87
TOP3A-218ENST00000584669 ABCC1P33527 1531 aa32.96■■■□□ 2.87
TOP3A-218ENST00000584669 ZNF777Q9ULD5 760 aaPredicted RBP32.93■■■□□ 2.86
TOP3A-218ENST00000584669 TRAPPC8Q9Y2L5 1435 aa32.93■■■□□ 2.86
TOP3A-218ENST00000584669 LMTK3Q96Q04 1460 aa32.93■■■□□ 2.86
TOP3A-218ENST00000584669 GPATCH8Q9UKJ3 1502 aaKnown RBP32.92■■■□□ 2.86
TOP3A-218ENST00000584669 ITSN2Q9NZM3 1697 aa32.92■■■□□ 2.86
TOP3A-218ENST00000584669 ARHGEF12Q9NZN5 1544 aa32.92■■■□□ 2.86
TOP3A-218ENST00000584669 DIP2CQ9Y2E4 1556 aa32.9■■■□□ 2.86
TOP3A-218ENST00000584669 SUPT6HQ7KZ85 1726 aaKnown RBP32.88■■■□□ 2.85
TOP3A-218ENST00000584669 SAMD9LQ8IVG5 1584 aa32.88■■■□□ 2.85
TOP3A-218ENST00000584669 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
TOP3A-218ENST00000584669 CCNB3Q8WWL7 1395 aa32.86■■■□□ 2.85
TOP3A-218ENST00000584669 ABCA6Q8N139 1617 aa32.86■■■□□ 2.85
TOP3A-218ENST00000584669 HSPA2P54652 639 aa32.83■■■□□ 2.85
TOP3A-218ENST00000584669 MAP3K1Q13233 1512 aa32.81■■■□□ 2.84
TOP3A-218ENST00000584669 LRRC9Q6ZRR7 1453 aa32.8■■■□□ 2.84
TOP3A-218ENST00000584669 SYCP2Q9BX26 1530 aa32.79■■■□□ 2.84
TOP3A-218ENST00000584669 NCOA2Q15596 1464 aa32.79■■■□□ 2.84
TOP3A-218ENST00000584669 CFDP1Q9UEE9 299 aaPredicted RBP32.78■■■□□ 2.84
TOP3A-218ENST00000584669 REREQ9P2R6 1566 aa32.78■■■□□ 2.84
TOP3A-218ENST00000584669 CEBPAP49715 358 aaPredicted RBP32.77■■■□□ 2.84
TOP3A-218ENST00000584669 HNRNPMP52272 730 aaKnown RBP eCLIP32.75■■■□□ 2.83
TOP3A-218ENST00000584669 KIDINS220Q9ULH0 1771 aa32.75■■■□□ 2.83
TOP3A-218ENST00000584669 KANK4Q5T7N3 995 aaPredicted RBP32.73■■■□□ 2.83
TOP3A-218ENST00000584669 SPAG9O60271 1321 aaKnown RBP32.72■■■□□ 2.83
TOP3A-218ENST00000584669 ESF1Q9H501 851 aaKnown RBP32.7■■■□□ 2.83
TOP3A-218ENST00000584669 AGLP35573 1532 aa32.7■■■□□ 2.83
TOP3A-218ENST00000584669 PLEKHH2Q8IVE3 1493 aa32.69■■■□□ 2.82
TOP3A-218ENST00000584669 ZNF644Q9H582 1327 aaPredicted RBP32.66■■■□□ 2.82
TOP3A-218ENST00000584669 KIAA1107Q9UPP5 1409 aa32.66■■■□□ 2.82
TOP3A-218ENST00000584669 PREX1Q8TCU6 1659 aa32.63■■■□□ 2.81
TOP3A-218ENST00000584669 ATP7AQ04656 1500 aa32.62■■■□□ 2.81
TOP3A-218ENST00000584669 APLP2Q06481 763 aa32.61■■■□□ 2.81
TOP3A-218ENST00000584669 CAMSAP2Q08AD1 1489 aa32.58■■■□□ 2.81
TOP3A-218ENST00000584669 UHRF1BP1Q6BDS2 1440 aa32.57■■■□□ 2.8
TOP3A-218ENST00000584669 INO80Q9ULG1 1556 aaPredicted RBP32.57■■■□□ 2.8
TOP3A-218ENST00000584669 C3P01024 1663 aa32.56■■■□□ 2.8
TOP3A-218ENST00000584669 MBD5Q9P267 1494 aa32.55■■■□□ 2.8
TOP3A-218ENST00000584669 FBXO41Q8TF61 875 aa32.54■■■□□ 2.8
TOP3A-218ENST00000584669 CNTLNQ9NXG0 1405 aa32.53■■■□□ 2.8
TOP3A-218ENST00000584669 A2MP01023 1474 aa32.52■■■□□ 2.8
TOP3A-218ENST00000584669 SETD1BQ9UPS6 1966 aaKnown RBP32.52■■■□□ 2.8
TOP3A-218ENST00000584669 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
TOP3A-218ENST00000584669 PLXNC1O60486 1568 aa32.46■■■□□ 2.79
TOP3A-218ENST00000584669 ARHGEF5Q12774 1597 aa32.44■■■□□ 2.78
TOP3A-218ENST00000584669 ADGBQ8N7X0 1667 aa32.43■■■□□ 2.78
TOP3A-218ENST00000584669 CCDC141Q6ZP82 1450 aa32.43■■■□□ 2.78
TOP3A-218ENST00000584669 GGT6Q6P531 493 aa32.43■■■□□ 2.78
TOP3A-218ENST00000584669 MIA2Q96PC5 1412 aa32.41■■■□□ 2.78
TOP3A-218ENST00000584669 MROH2AA6NES4 1674 aa32.4■■■□□ 2.78
TOP3A-218ENST00000584669 ZMYM3Q14202 1370 aa32.39■■■□□ 2.78
TOP3A-218ENST00000584669 CLTCQ00610 1675 aaKnown RBP32.38■■■□□ 2.77
TOP3A-218ENST00000584669 PTPN23Q9H3S7 1636 aa32.37■■■□□ 2.77
TOP3A-218ENST00000584669 RTEL1-TNFRSF6BF6WH68 1400 aa32.36■■■□□ 2.77
TOP3A-218ENST00000584669 STRCQ7RTU9 1775 aa32.36■■■□□ 2.77
TOP3A-218ENST00000584669 DMRT2Q9Y5R5 561 aa32.35■■■□□ 2.77
TOP3A-218ENST00000584669 NPATQ14207 1427 aa32.34■■■□□ 2.77
TOP3A-218ENST00000584669 RSPH4AQ5TD94 716 aa32.33■■■□□ 2.77
TOP3A-218ENST00000584669 CERKQ8TCT0 537 aa32.33■■■□□ 2.77
TOP3A-218ENST00000584669 DHX29Q7Z478 1369 aaKnown RBP32.3■■■□□ 2.76
TOP3A-218ENST00000584669 CROCC2H7BZ55 1655 aa32.28■■■□□ 2.76
TOP3A-218ENST00000584669 FGD6Q6ZV73 1430 aa32.28■■■□□ 2.76
TOP3A-218ENST00000584669 MAST1Q9Y2H9 1570 aa32.28■■■□□ 2.76
TOP3A-218ENST00000584669 KIF3BO15066 747 aa32.26■■■□□ 2.75
TOP3A-218ENST00000584669 PPP6R1Q9UPN7 881 aa32.25■■■□□ 2.75
TOP3A-218ENST00000584669 TSPY4P0CV99 314 aa32.24■■■□□ 2.75
TOP3A-218ENST00000584669 TSPY10P0CW01 314 aa32.24■■■□□ 2.75
TOP3A-218ENST00000584669 PTPRKQ15262 1439 aa32.24■■■□□ 2.75
TOP3A-218ENST00000584669 TCOF1Q13428 1488 aaKnown RBP32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms