RNA–Protein interactions for RNA: ENST00000584287.5

ARHGAP28-214, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-214ENST00000584287 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
ARHGAP28-214ENST00000584287 ST18O60284 1047 aa9.82□□□□□ -0.84
ARHGAP28-214ENST00000584287 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.81□□□□□ -0.84
ARHGAP28-214ENST00000584287 SPRYD3Q8NCJ5 442 aa9.79□□□□□ -0.84
ARHGAP28-214ENST00000584287 TMC2Q8TDI7 906 aa9.79□□□□□ -0.84
ARHGAP28-214ENST00000584287 PAXIP1Q6ZW49 1069 aaPredicted RBP9.78□□□□□ -0.84
ARHGAP28-214ENST00000584287 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
ARHGAP28-214ENST00000584287 CFAP44Q96MT7 982 aa9.77□□□□□ -0.85
ARHGAP28-214ENST00000584287 GPHNQ9NQX3 736 aaPredicted RBP9.76□□□□□ -0.85
ARHGAP28-214ENST00000584287 NCKAP5LQ9HCH0 1330 aa9.76□□□□□ -0.85
ARHGAP28-214ENST00000584287 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
ARHGAP28-214ENST00000584287 CRISPLD2Q9H0B8 497 aa9.75□□□□□ -0.85
ARHGAP28-214ENST00000584287 POTEMA6NI47 508 aa9.74□□□□□ -0.85
ARHGAP28-214ENST00000584287 POTEGQ6S5H5 508 aa9.74□□□□□ -0.85
ARHGAP28-214ENST00000584287 DSG2Q14126 1118 aa9.73□□□□□ -0.85
ARHGAP28-214ENST00000584287 FOXK1P85037 733 aa9.72□□□□□ -0.85
ARHGAP28-214ENST00000584287 MARVELD3Q96A59 401 aa9.72□□□□□ -0.85
ARHGAP28-214ENST00000584287 ZNF710Q8N1W2 664 aa9.71□□□□□ -0.86
ARHGAP28-214ENST00000584287 PLPP6Q8IY26 295 aa9.7□□□□□ -0.86
ARHGAP28-214ENST00000584287 PDE4AP27815 886 aa9.69□□□□□ -0.86
ARHGAP28-214ENST00000584287 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
ARHGAP28-214ENST00000584287 LARP6Q9BRS8 491 aaKnown RBP9.69□□□□□ -0.86
ARHGAP28-214ENST00000584287 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
ARHGAP28-214ENST00000584287 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
ARHGAP28-214ENST00000584287 KHSRPQ92945 711 aaKnown RBP eCLIP9.68□□□□□ -0.86
ARHGAP28-214ENST00000584287 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
ARHGAP28-214ENST00000584287 ZSWIM6Q9HCJ5 1215 aa9.67□□□□□ -0.86
ARHGAP28-214ENST00000584287 SLC34A2O95436 690 aa9.66□□□□□ -0.86
ARHGAP28-214ENST00000584287 PPP1R15BQ5SWA1 713 aa9.66□□□□□ -0.86
ARHGAP28-214ENST00000584287 EMP3P54852 163 aa9.65□□□□□ -0.86
ARHGAP28-214ENST00000584287 MFSD10Q14728 455 aa9.65□□□□□ -0.86
ARHGAP28-214ENST00000584287 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
ARHGAP28-214ENST00000584287 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
ARHGAP28-214ENST00000584287 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
ARHGAP28-214ENST00000584287 PCDHGA4Q9Y5G9 962 aa9.63□□□□□ -0.87
ARHGAP28-214ENST00000584287 PTCD2Q8WV60 388 aaKnown RBP9.62□□□□□ -0.87
ARHGAP28-214ENST00000584287 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
ARHGAP28-214ENST00000584287 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
ARHGAP28-214ENST00000584287 NUDT7P0C024 238 aa9.59□□□□□ -0.87
ARHGAP28-214ENST00000584287 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
ARHGAP28-214ENST00000584287 UPF1Q92900 1129 aaKnown RBP eCLIP9.58□□□□□ -0.88
ARHGAP28-214ENST00000584287 PLCB2Q00722 1185 aa9.57□□□□□ -0.88
ARHGAP28-214ENST00000584287 OXER1Q8TDS5 423 aa9.57□□□□□ -0.88
ARHGAP28-214ENST00000584287 ERBB3P21860 1342 aa9.56□□□□□ -0.88
ARHGAP28-214ENST00000584287 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
ARHGAP28-214ENST00000584287 CDAN1Q8IWY9 1227 aa9.56□□□□□ -0.88
ARHGAP28-214ENST00000584287 EMILIN3Q9NT22 766 aa9.55□□□□□ -0.88
ARHGAP28-214ENST00000584287 VARS2Q5ST30 1063 aaKnown RBP9.54□□□□□ -0.88
ARHGAP28-214ENST00000584287 ZNF316A6NFI3 1004 aaPredicted RBP9.53□□□□□ -0.88
ARHGAP28-214ENST00000584287 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
ARHGAP28-214ENST00000584287 TBC1D12O60347 775 aa9.52□□□□□ -0.89
ARHGAP28-214ENST00000584287 CAMK2BQ13554 666 aa9.52□□□□□ -0.89
ARHGAP28-214ENST00000584287 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
ARHGAP28-214ENST00000584287 MAP3K9P80192 1104 aa9.47□□□□□ -0.89
ARHGAP28-214ENST00000584287 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
ARHGAP28-214ENST00000584287 KRTAP3-2Q9BYR7 98 aa9.47□□□□□ -0.89
ARHGAP28-214ENST00000584287 ZNF687Q8N1G0 1237 aa9.46□□□□□ -0.9
ARHGAP28-214ENST00000584287 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
ARHGAP28-214ENST00000584287 DPYSL4O14531 572 aa9.45□□□□□ -0.9
ARHGAP28-214ENST00000584287 EVI5O60447 810 aa9.45□□□□□ -0.9
ARHGAP28-214ENST00000584287 E2F4Q16254 413 aa9.45□□□□□ -0.9
ARHGAP28-214ENST00000584287 ANO8Q9HCE9 1232 aaPredicted RBP9.44□□□□□ -0.9
ARHGAP28-214ENST00000584287 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
ARHGAP28-214ENST00000584287 POTEEQ6S8J3 1075 aa9.42□□□□□ -0.9
ARHGAP28-214ENST00000584287 PSDA5PKW4 1024 aaPredicted RBP9.39□□□□□ -0.91
ARHGAP28-214ENST00000584287 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
ARHGAP28-214ENST00000584287 AXIN2Q9Y2T1 843 aa9.38□□□□□ -0.91
ARHGAP28-214ENST00000584287 FOSBP53539 338 aa9.37□□□□□ -0.91
ARHGAP28-214ENST00000584287 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
ARHGAP28-214ENST00000584287 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
ARHGAP28-214ENST00000584287 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
ARHGAP28-214ENST00000584287 JPH4Q96JJ6 628 aa9.36□□□□□ -0.91
ARHGAP28-214ENST00000584287 PDIA6Q15084 440 aa9.35□□□□□ -0.91
ARHGAP28-214ENST00000584287 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
ARHGAP28-214ENST00000584287 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
ARHGAP28-214ENST00000584287 PBX2P40425 430 aa9.33□□□□□ -0.92
ARHGAP28-214ENST00000584287 SPNS2Q8IVW8 549 aa9.33□□□□□ -0.92
ARHGAP28-214ENST00000584287 PCDHGA10Q9Y5H3 936 aa9.33□□□□□ -0.92
ARHGAP28-214ENST00000584287 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
ARHGAP28-214ENST00000584287 PSEN2P49810 448 aa9.32□□□□□ -0.92
ARHGAP28-214ENST00000584287 DDX12PQ92771 950 aa9.32□□□□□ -0.92
ARHGAP28-214ENST00000584287 SPDYE16A6NNV3 312 aaPredicted RBP9.31□□□□□ -0.92
ARHGAP28-214ENST00000584287 PTGER2P43116 358 aa9.31□□□□□ -0.92
ARHGAP28-214ENST00000584287 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
ARHGAP28-214ENST00000584287 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
ARHGAP28-214ENST00000584287 ADAM33Q9BZ11 813 aa9.31□□□□□ -0.92
ARHGAP28-214ENST00000584287 ANKRD13DQ6ZTN6 518 aa9.3□□□□□ -0.92
ARHGAP28-214ENST00000584287 ZDHHC16Q969W1 377 aa9.3□□□□□ -0.92
ARHGAP28-214ENST00000584287 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
ARHGAP28-214ENST00000584287 BCL2L12Q9HB09 334 aa9.3□□□□□ -0.92
ARHGAP28-214ENST00000584287 PHF14O94880 888 aa9.29□□□□□ -0.92
ARHGAP28-214ENST00000584287 ARHGEF1Q92888 912 aaKnown RBP9.29□□□□□ -0.92
ARHGAP28-214ENST00000584287 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
ARHGAP28-214ENST00000584287 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
ARHGAP28-214ENST00000584287 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
ARHGAP28-214ENST00000584287 VSIG10Q8N0Z9 540 aa9.25□□□□□ -0.93
ARHGAP28-214ENST00000584287 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
ARHGAP28-214ENST00000584287 EPAS1Q99814 870 aa9.25□□□□□ -0.93
ARHGAP28-214ENST00000584287 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
ARHGAP28-214ENST00000584287 PTPREP23469 700 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms